RNA–Protein interactions for RNA: ENST00000496104.1

XPA-204, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 3

Gene XPA, Length 429 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-204ENST00000496104 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.62□□□□□ -1.35
XPA-204ENST00000496104 ZNF408Q9H9D4 720 aa6.62□□□□□ -1.35
XPA-204ENST00000496104 EDC4Q6P2E9 1401 aaKnown RBP6.61□□□□□ -1.35
XPA-204ENST00000496104 IGSF3O75054 1194 aa6.61□□□□□ -1.35
XPA-204ENST00000496104 SRGNP10124 158 aa6.61□□□□□ -1.35
XPA-204ENST00000496104 DNAJB2P25686 324 aa6.61□□□□□ -1.35
XPA-204ENST00000496104 CLCN1P35523 988 aa6.61□□□□□ -1.35
XPA-204ENST00000496104 NOM1Q5C9Z4 860 aaKnown RBP6.61□□□□□ -1.35
XPA-204ENST00000496104 RGS22Q8NE09 1264 aa6.61□□□□□ -1.35
XPA-204ENST00000496104 TRPM4Q8TD43 1214 aa6.61□□□□□ -1.35
XPA-204ENST00000496104 ARMC5Q96C12 935 aa6.61□□□□□ -1.35
XPA-204ENST00000496104 POM121Q96HA1 1249 aa6.61□□□□□ -1.35
XPA-204ENST00000496104 SPSB2Q99619 263 aa6.61□□□□□ -1.35
XPA-204ENST00000496104 GPCPD1Q9NPB8 672 aa6.61□□□□□ -1.35
XPA-204ENST00000496104 FCF1Q9Y324 198 aaKnown RBP6.61□□□□□ -1.35
XPA-204ENST00000496104 SHTN1A0MZ66 631 aa6.6□□□□□ -1.35
XPA-204ENST00000496104 GPR25O00155 361 aa6.6□□□□□ -1.35
XPA-204ENST00000496104 PHKG2P15735 406 aa6.6□□□□□ -1.35
XPA-204ENST00000496104 IARSP41252 1262 aaKnown RBP6.6□□□□□ -1.35
XPA-204ENST00000496104 MDM2Q00987 491 aaPredicted RBP6.6□□□□□ -1.35
XPA-204ENST00000496104 RASAL3Q86YV0 1011 aa6.6□□□□□ -1.35
XPA-204ENST00000496104 DEFB123Q8N688 67 aa6.6□□□□□ -1.35
XPA-204ENST00000496104 SHISA4Q96DD7 197 aa6.6□□□□□ -1.35
XPA-204ENST00000496104 BRIP1Q9BX63 1249 aa6.6□□□□□ -1.35
XPA-204ENST00000496104 FAM217BQ9NTX9 383 aaPredicted RBP6.6□□□□□ -1.35
XPA-204ENST00000496104 COL15A1P39059 1388 aa6.59□□□□□ -1.35
XPA-204ENST00000496104 RRS1Q15050 365 aaKnown RBP6.59□□□□□ -1.35
XPA-204ENST00000496104 CCDC93Q567U6 631 aa6.59□□□□□ -1.35
XPA-204ENST00000496104 STYK1Q6J9G0 422 aa6.59□□□□□ -1.35
XPA-204ENST00000496104 OTOP1Q7RTM1 612 aa6.59□□□□□ -1.35
XPA-204ENST00000496104 SNIP1Q8TAD8 396 aaKnown RBP6.59□□□□□ -1.35
XPA-204ENST00000496104 TMEM134Q9H6X4 195 aa6.59□□□□□ -1.35
XPA-204ENST00000496104 GPRC5DQ9NZD1 345 aa6.59□□□□□ -1.35
XPA-204ENST00000496104 NARFQ9UHQ1 456 aa6.59□□□□□ -1.35
XPA-204ENST00000496104 HDAC9Q9UKV0 1011 aa6.59□□□□□ -1.35
XPA-204ENST00000496104 GJA3Q9Y6H8 435 aa6.59□□□□□ -1.35
XPA-204ENST00000496104 ZNF609O15014 1411 aa6.59□□□□□ -1.36
XPA-204ENST00000496104 J3QL48 77 aa6.58□□□□□ -1.36
XPA-204ENST00000496104 GSK3AP49840 483 aa6.58□□□□□ -1.36
XPA-204ENST00000496104 KCNMA1Q12791 1236 aa6.58□□□□□ -1.36
XPA-204ENST00000496104 HSP90AB2PQ58FF8 381 aa6.58□□□□□ -1.36
XPA-204ENST00000496104 TBC1D9BQ66K14 1250 aa6.58□□□□□ -1.36
XPA-204ENST00000496104 INTS3Q68E01 1043 aaKnown RBP6.58□□□□□ -1.36
XPA-204ENST00000496104 UBE2Q1Q7Z7E8 422 aa6.58□□□□□ -1.36
XPA-204ENST00000496104 NPAS3Q8IXF0 933 aa6.58□□□□□ -1.36
XPA-204ENST00000496104 ADARB2Q9NS39 739 aaKnown RBP6.58□□□□□ -1.36
XPA-204ENST00000496104 POLR2AP24928 1970 aaKnown RBP6.58□□□□□ -1.36
XPA-204ENST00000496104 TONSLQ96HA7 1378 aa6.57□□□□□ -1.36
XPA-204ENST00000496104 SSC5DA1L4H1 1573 aa6.57□□□□□ -1.36
XPA-204ENST00000496104 ALPK3Q96L96 1907 aa6.57□□□□□ -1.36
XPA-204ENST00000496104 A0A1W2PPC1 479 aa6.57□□□□□ -1.36
XPA-204ENST00000496104 PATL2C9JE40 543 aaKnown RBP6.57□□□□□ -1.36
XPA-204ENST00000496104 E9PSI1 815 aa6.57□□□□□ -1.36
XPA-204ENST00000496104 WNT7AO00755 349 aa6.57□□□□□ -1.36
XPA-204ENST00000496104 ZNF157P51786 506 aaPredicted RBP6.57□□□□□ -1.36
XPA-204ENST00000496104 PUS10Q3MIT2 529 aaKnown RBP6.57□□□□□ -1.36
XPA-204ENST00000496104 MYSM1Q5VVJ2 828 aa6.57□□□□□ -1.36
XPA-204ENST00000496104 AEBP1Q8IUX7 1158 aa6.57□□□□□ -1.36
XPA-204ENST00000496104 HPS1Q92902 700 aa6.57□□□□□ -1.36
XPA-204ENST00000496104 CNKSR1Q969H4 720 aa6.57□□□□□ -1.36
XPA-204ENST00000496104 ZNF333Q96JL9 665 aa6.57□□□□□ -1.36
XPA-204ENST00000496104 GUCD1Q96NT3 240 aa6.57□□□□□ -1.36
XPA-204ENST00000496104 CFHR5Q9BXR6 569 aa6.57□□□□□ -1.36
XPA-204ENST00000496104 GBA2Q9HCG7 927 aaPredicted RBP6.57□□□□□ -1.36
XPA-204ENST00000496104 ZBTB1Q9Y2K1 713 aa6.57□□□□□ -1.36
XPA-204ENST00000496104 EVC2Q86UK5 1308 aa6.56□□□□□ -1.36
XPA-204ENST00000496104 WTIPA6NIX2 430 aaPredicted RBP6.56□□□□□ -1.36
XPA-204ENST00000496104 ADM5C9JUS6 153 aa6.56□□□□□ -1.36
XPA-204ENST00000496104 H3BM21 787 aa6.56□□□□□ -1.36
XPA-204ENST00000496104 PTCD1O75127 700 aaKnown RBP6.56□□□□□ -1.36
XPA-204ENST00000496104 EGFRP00533 1210 aa6.56□□□□□ -1.36
XPA-204ENST00000496104 LMOD1P29536 600 aaPredicted RBP6.56□□□□□ -1.36
XPA-204ENST00000496104 AMPHP49418 695 aa6.56□□□□□ -1.36
XPA-204ENST00000496104 RBM25P49756 843 aaKnown RBP6.56□□□□□ -1.36
XPA-204ENST00000496104 MFAP1P55081 439 aaKnown RBP6.56□□□□□ -1.36
XPA-204ENST00000496104 SOGA3Q5TF21 947 aa6.56□□□□□ -1.36
XPA-204ENST00000496104 METTL3Q86U44 580 aaKnown RBP6.56□□□□□ -1.36
XPA-204ENST00000496104 USP48Q86UV5 1035 aa6.56□□□□□ -1.36
XPA-204ENST00000496104 DNAJC10Q8IXB1 793 aa6.56□□□□□ -1.36
XPA-204ENST00000496104 MTMR7Q9Y216 660 aa6.56□□□□□ -1.36
XPA-204ENST00000496104 KLRG2A4D1S0 409 aaPredicted RBP6.55□□□□□ -1.36
XPA-204ENST00000496104 ZBTB7BO15156 539 aaPredicted RBP6.55□□□□□ -1.36
XPA-204ENST00000496104 FKTNO75072 461 aa6.55□□□□□ -1.36
XPA-204ENST00000496104 CYP19A1P11511 503 aaPredicted RBP6.55□□□□□ -1.36
XPA-204ENST00000496104 PDE6BP35913 854 aa6.55□□□□□ -1.36
XPA-204ENST00000496104 PDE4CQ08493 712 aa6.55□□□□□ -1.36
XPA-204ENST00000496104 MAP3K12Q12852 859 aa6.55□□□□□ -1.36
XPA-204ENST00000496104 CDC37L1Q7L3B6 337 aa6.55□□□□□ -1.36
XPA-204ENST00000496104 PXYLP1Q8TE99 480 aa6.55□□□□□ -1.36
XPA-204ENST00000496104 MASTLQ96GX5 879 aa6.55□□□□□ -1.36
XPA-204ENST00000496104 SNRKQ9NRH2 765 aa6.55□□□□□ -1.36
XPA-204ENST00000496104 POLR3EQ9NVU0 708 aa6.55□□□□□ -1.36
XPA-204ENST00000496104 COG6Q9Y2V7 657 aa6.55□□□□□ -1.36
XPA-204ENST00000496104 TRIM17Q9Y577 477 aa6.55□□□□□ -1.36
XPA-204ENST00000496104 ZSWIM8A7E2V4 1837 aa6.55□□□□□ -1.36
XPA-204ENST00000496104 ZFHX4Q86UP3 3567 aa6.54□□□□□ -1.36
XPA-204ENST00000496104 LAMB1P07942 1786 aa6.54□□□□□ -1.36
XPA-204ENST00000496104 SPDYE5A6NIY4 337 aa6.54□□□□□ -1.36
XPA-204ENST00000496104 ZBTB24O43167 697 aaPredicted RBP6.54□□□□□ -1.36
XPA-204ENST00000496104 GMPSP49915 693 aaPredicted RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms