RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 RPAP1Q9BWH6 1393 aaPredicted RBP19.6■□□□□ 0.73
HLA-A-208ENST00000496081 CPA1P15085 419 aa19.6■□□□□ 0.73
HLA-A-208ENST00000496081 PDE6AP16499 860 aa19.6■□□□□ 0.73
HLA-A-208ENST00000496081 HOXA10P31260 410 aaPredicted RBP19.6■□□□□ 0.73
HLA-A-208ENST00000496081 SLC15A2Q16348 729 aa19.6■□□□□ 0.73
HLA-A-208ENST00000496081 FBXO33Q7Z6M2 555 aa19.6■□□□□ 0.73
HLA-A-208ENST00000496081 TMX3Q96JJ7 454 aa19.6■□□□□ 0.73
HLA-A-208ENST00000496081 CHMP5Q9NZZ3 219 aa19.6■□□□□ 0.73
HLA-A-208ENST00000496081 ZNF532Q9HCE3 1301 aa19.59■□□□□ 0.73
HLA-A-208ENST00000496081 TCRBV5S4A2TA0A5A2 114 aa19.59■□□□□ 0.73
HLA-A-208ENST00000496081 MMP10P09238 476 aa19.59■□□□□ 0.73
HLA-A-208ENST00000496081 CYP21A2P08686 494 aa19.58■□□□□ 0.73
HLA-A-208ENST00000496081 PSMA5P28066 241 aa19.58■□□□□ 0.73
HLA-A-208ENST00000496081 MAP3K12Q12852 859 aa19.58■□□□□ 0.73
HLA-A-208ENST00000496081 RUFY3Q7L099 469 aa19.58■□□□□ 0.73
HLA-A-208ENST00000496081 VPS37DQ86XT2 251 aa19.58■□□□□ 0.73
HLA-A-208ENST00000496081 BRIP1Q9BX63 1249 aa19.58■□□□□ 0.73
HLA-A-208ENST00000496081 CYP46A1Q9Y6A2 500 aa19.58■□□□□ 0.73
HLA-A-208ENST00000496081 COL1A1P02452 1464 aaPredicted RBP19.58■□□□□ 0.72
HLA-A-208ENST00000496081 IRS2Q9Y4H2 1338 aa19.57■□□□□ 0.72
HLA-A-208ENST00000496081 FOXP2O15409 715 aa19.57■□□□□ 0.72
HLA-A-208ENST00000496081 GPAA1O43292 621 aa19.57■□□□□ 0.72
HLA-A-208ENST00000496081 MSL1Q68DK7 614 aa19.57■□□□□ 0.72
HLA-A-208ENST00000496081 NOL8Q76FK4 1167 aaKnown RBP19.57■□□□□ 0.72
HLA-A-208ENST00000496081 CRAMP1Q96RY5 1269 aa19.57■□□□□ 0.72
HLA-A-208ENST00000496081 ANKIB1Q9P2G1 1089 aa19.57■□□□□ 0.72
HLA-A-208ENST00000496081 XDHP47989 1333 aa19.57■□□□□ 0.72
HLA-A-208ENST00000496081 AK2P54819 239 aa19.57■□□□□ 0.72
HLA-A-208ENST00000496081 COL9A3Q14050 684 aaPredicted RBP19.57■□□□□ 0.72
HLA-A-208ENST00000496081 NBR1Q14596 966 aa19.57■□□□□ 0.72
HLA-A-208ENST00000496081 STK32BQ9NY57 414 aa19.57■□□□□ 0.72
HLA-A-208ENST00000496081 LEMD3Q9Y2U8 911 aa19.57■□□□□ 0.72
HLA-A-208ENST00000496081 PARP3Q9Y6F1 533 aa19.57■□□□□ 0.72
HLA-A-208ENST00000496081 BBOX1O75936 387 aa19.56■□□□□ 0.72
HLA-A-208ENST00000496081 HIBADHP31937 336 aaKnown RBP19.56■□□□□ 0.72
HLA-A-208ENST00000496081 TXNRD3Q86VQ6 643 aa19.56■□□□□ 0.72
HLA-A-208ENST00000496081 MAGEB6Q8N7X4 407 aa19.56■□□□□ 0.72
HLA-A-208ENST00000496081 PDRG1Q9NUG6 133 aa19.56■□□□□ 0.72
HLA-A-208ENST00000496081 DENND2AQ9ULE3 1009 aa19.56■□□□□ 0.72
HLA-A-208ENST00000496081 SEMA3EO15041 775 aa19.55■□□□□ 0.72
HLA-A-208ENST00000496081 KRT32Q14532 448 aa19.55■□□□□ 0.72
HLA-A-208ENST00000496081 CIZ1Q9ULV3 898 aaPredicted RBP19.55■□□□□ 0.72
HLA-A-208ENST00000496081 GPSM2P81274 684 aa19.55■□□□□ 0.72
HLA-A-208ENST00000496081 CUL4AQ13619 759 aa19.55■□□□□ 0.72
HLA-A-208ENST00000496081 LRP2BPQ9P2M1 347 aa19.55■□□□□ 0.72
HLA-A-208ENST00000496081 QSER1Q2KHR3 1735 aa19.54■□□□□ 0.72
HLA-A-208ENST00000496081 A0A0G2JLW4 131 aa19.54■□□□□ 0.72
HLA-A-208ENST00000496081 NFKBIBQ15653 356 aa19.54■□□□□ 0.72
HLA-A-208ENST00000496081 BLOC1S2Q6QNY1 142 aa19.54■□□□□ 0.72
HLA-A-208ENST00000496081 MYH13Q9UKX3 1938 aa19.53■□□□□ 0.72
HLA-A-208ENST00000496081 SRGNP10124 158 aa19.53■□□□□ 0.72
HLA-A-208ENST00000496081 RPS6KB1P23443 525 aa19.53■□□□□ 0.72
HLA-A-208ENST00000496081 TTLL5Q6EMB2 1281 aa19.53■□□□□ 0.72
HLA-A-208ENST00000496081 ZGPATQ8N5A5 531 aaKnown RBP19.53■□□□□ 0.72
HLA-A-208ENST00000496081 ABCF2Q9UG63 623 aa19.53■□□□□ 0.72
HLA-A-208ENST00000496081 LIMCH1Q9UPQ0 1083 aa19.53■□□□□ 0.72
HLA-A-208ENST00000496081 PDS5AQ29RF7 1337 aaKnown RBP19.53■□□□□ 0.72
HLA-A-208ENST00000496081 ZBTB22O15209 634 aa19.52■□□□□ 0.72
HLA-A-208ENST00000496081 FGAP02671 866 aa19.52■□□□□ 0.72
HLA-A-208ENST00000496081 STOX1Q6ZVD7 989 aa19.52■□□□□ 0.72
HLA-A-208ENST00000496081 NEK1Q96PY6 1258 aa19.52■□□□□ 0.72
HLA-A-208ENST00000496081 CTNNA3Q9UI47 895 aa19.52■□□□□ 0.72
HLA-A-208ENST00000496081 NSFL1CQ9UNZ2 370 aaKnown RBP19.52■□□□□ 0.72
HLA-A-208ENST00000496081 FRAT2O75474 233 aaPredicted RBP19.52■□□□□ 0.71
HLA-A-208ENST00000496081 PDE6BP35913 854 aa19.52■□□□□ 0.71
HLA-A-208ENST00000496081 C15orf52Q6ZUT6 534 aaKnown RBP19.52■□□□□ 0.71
HLA-A-208ENST00000496081 AIDAQ96BJ3 306 aa19.52■□□□□ 0.71
HLA-A-208ENST00000496081 STRBPQ96SI9 672 aaKnown RBP19.52■□□□□ 0.71
HLA-A-208ENST00000496081 LARP6Q9BRS8 491 aaKnown RBP19.52■□□□□ 0.71
HLA-A-208ENST00000496081 LRRC37AA6NMS7 1700 aa19.51■□□□□ 0.71
HLA-A-208ENST00000496081 NPR1P16066 1061 aa19.51■□□□□ 0.71
HLA-A-208ENST00000496081 INTS4Q96HW7 963 aaKnown RBP19.51■□□□□ 0.71
HLA-A-208ENST00000496081 ALDH8A1Q9H2A2 487 aaPredicted RBP19.51■□□□□ 0.71
HLA-A-208ENST00000496081 CWC22Q9HCG8 908 aaKnown RBP19.51■□□□□ 0.71
HLA-A-208ENST00000496081 ATP2B4P23634 1241 aa19.5■□□□□ 0.71
HLA-A-208ENST00000496081 TMC4Q7Z404 712 aa19.5■□□□□ 0.71
HLA-A-208ENST00000496081 TCEANC2Q96MN5 208 aa19.5■□□□□ 0.71
HLA-A-208ENST00000496081 PODXL2Q9NZ53 605 aa19.5■□□□□ 0.71
HLA-A-208ENST00000496081 RAI14Q9P0K7 980 aa19.5■□□□□ 0.71
HLA-A-208ENST00000496081 LAMA4Q16363 1823 aa19.5■□□□□ 0.71
HLA-A-208ENST00000496081 COL11A2P13942 1736 aaPredicted RBP19.5■□□□□ 0.71
HLA-A-208ENST00000496081 PPEF1O14829 653 aaPredicted RBP19.49■□□□□ 0.71
HLA-A-208ENST00000496081 R3HDM1Q15032 1099 aaKnown RBP19.49■□□□□ 0.71
HLA-A-208ENST00000496081 GPR101Q96P66 508 aaPredicted RBP19.49■□□□□ 0.71
HLA-A-208ENST00000496081 CACNA1SQ13698 1873 aa19.49■□□□□ 0.71
HLA-A-208ENST00000496081 PSDA5PKW4 1024 aaPredicted RBP19.49■□□□□ 0.71
HLA-A-208ENST00000496081 E7EWF7 191 aa19.49■□□□□ 0.71
HLA-A-208ENST00000496081 UFL1O94874 794 aa19.49■□□□□ 0.71
HLA-A-208ENST00000496081 MBD4O95243 580 aa19.49■□□□□ 0.71
HLA-A-208ENST00000496081 IMMTQ16891 758 aaKnown RBP19.49■□□□□ 0.71
HLA-A-208ENST00000496081 SP8Q8IXZ3 490 aa19.49■□□□□ 0.71
HLA-A-208ENST00000496081 ARMT1Q9H993 441 aa19.49■□□□□ 0.71
HLA-A-208ENST00000496081 GGA1Q9UJY5 639 aa19.49■□□□□ 0.71
HLA-A-208ENST00000496081 CYP7A1P22680 504 aa19.48■□□□□ 0.71
HLA-A-208ENST00000496081 RAB3GAP1Q15042 981 aa19.48■□□□□ 0.71
HLA-A-208ENST00000496081 ADGRA1Q86SQ6 560 aa19.48■□□□□ 0.71
HLA-A-208ENST00000496081 TDRD7Q8NHU6 1098 aaKnown RBP19.48■□□□□ 0.71
HLA-A-208ENST00000496081 PDGFDQ9GZP0 370 aaPredicted RBP19.48■□□□□ 0.71
HLA-A-208ENST00000496081 LTBP1Q14766 1721 aa19.48■□□□□ 0.71
HLA-A-208ENST00000496081 LARGE1O95461 756 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms