RNA–Protein interactions for RNA: ENST00000495940.2

TFE3-205, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

TSL 2

Gene TFE3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-205ENST00000495940 ATP2B4P23634 1241 aa17.07■□□□□ 0.32
TFE3-205ENST00000495940 SP3Q02447 781 aa17.07■□□□□ 0.32
TFE3-205ENST00000495940 SLC4A8Q2Y0W8 1093 aa17.07■□□□□ 0.32
TFE3-205ENST00000495940 SLC9C1Q4G0N8 1177 aa17.07■□□□□ 0.32
TFE3-205ENST00000495940 HDGFL1Q5TGJ6 251 aa17.07■□□□□ 0.32
TFE3-205ENST00000495940 KIAA0825Q8IV33 1275 aa17.07■□□□□ 0.32
TFE3-205ENST00000495940 MYO3BQ8WXR4 1341 aa17.06■□□□□ 0.32
TFE3-205ENST00000495940 APAF1O14727 1248 aa17.06■□□□□ 0.32
TFE3-205ENST00000495940 RIPK4P57078 832 aa17.06■□□□□ 0.32
TFE3-205ENST00000495940 CCDC152Q4G0S7 254 aa17.06■□□□□ 0.32
TFE3-205ENST00000495940 ANKRD18AQ8IVF6 992 aa17.06■□□□□ 0.32
TFE3-205ENST00000495940 ZBTB38Q8NAP3 1195 aaPredicted RBP17.06■□□□□ 0.32
TFE3-205ENST00000495940 ZBED3Q96IU2 234 aaPredicted RBP17.06■□□□□ 0.32
TFE3-205ENST00000495940 PTPN18Q99952 460 aa17.06■□□□□ 0.32
TFE3-205ENST00000495940 PNNQ9H307 717 aaKnown RBP17.06■□□□□ 0.32
TFE3-205ENST00000495940 MAP3K11Q16584 847 aa17.05■□□□□ 0.32
TFE3-205ENST00000495940 TXNRD3Q86VQ6 643 aa17.05■□□□□ 0.32
TFE3-205ENST00000495940 DEFB129Q9H1M3 183 aa17.05■□□□□ 0.32
TFE3-205ENST00000495940 BABAM1Q9NWV8 329 aa17.05■□□□□ 0.32
TFE3-205ENST00000495940 PCDHAC2Q9Y5I4 1007 aa17.05■□□□□ 0.32
TFE3-205ENST00000495940 TRIM28Q13263 835 aaKnown RBP17.04■□□□□ 0.32
TFE3-205ENST00000495940 STRIP1Q5VSL9 837 aa17.04■□□□□ 0.32
TFE3-205ENST00000495940 SH3TC2Q8TF17 1288 aa17.04■□□□□ 0.32
TFE3-205ENST00000495940 A0A1B0GUL6 1792 aa17.04■□□□□ 0.32
TFE3-205ENST00000495940 PDE8AO60658 829 aa17.03■□□□□ 0.32
TFE3-205ENST00000495940 KLRK1P26718 216 aa17.03■□□□□ 0.32
TFE3-205ENST00000495940 SHISA4Q96DD7 197 aa17.03■□□□□ 0.32
TFE3-205ENST00000495940 LAMA3Q16787 3333 aa17.03■□□□□ 0.32
TFE3-205ENST00000495940 AOX1Q06278 1338 aa17.02■□□□□ 0.32
TFE3-205ENST00000495940 WWC1Q8IX03 1113 aa17.02■□□□□ 0.32
TFE3-205ENST00000495940 MYD88Q99836 296 aa17.02■□□□□ 0.32
TFE3-205ENST00000495940 DBF4Q9UBU7 674 aaPredicted RBP17.02■□□□□ 0.32
TFE3-205ENST00000495940 LAS1LQ9Y4W2 734 aaKnown RBP17.02■□□□□ 0.32
TFE3-205ENST00000495940 CLRN2A0PK11 232 aa17.01■□□□□ 0.31
TFE3-205ENST00000495940 PPP1R12BO60237 982 aaPredicted RBP17.01■□□□□ 0.31
TFE3-205ENST00000495940 PLIN1O60240 522 aa17.01■□□□□ 0.31
TFE3-205ENST00000495940 PCCAP05165 728 aaPredicted RBP17.01■□□□□ 0.31
TFE3-205ENST00000495940 CCT4P50991 539 aaKnown RBP17.01■□□□□ 0.31
TFE3-205ENST00000495940 OTUD7BQ6GQQ9 843 aa17.01■□□□□ 0.31
TFE3-205ENST00000495940 NBPF11Q86T75 865 aa17.01■□□□□ 0.31
TFE3-205ENST00000495940 MYH16Q9H6N6 1097 aa17.01■□□□□ 0.31
TFE3-205ENST00000495940 MINPP1Q9UNW1 487 aa17.01■□□□□ 0.31
TFE3-205ENST00000495940 TESPA1A2RU30 521 aaPredicted RBP17■□□□□ 0.31
TFE3-205ENST00000495940 TMPOP42166 694 aaKnown RBP17■□□□□ 0.31
TFE3-205ENST00000495940 NBPF12Q5TAG4 269 aaPredicted RBP17■□□□□ 0.31
TFE3-205ENST00000495940 TTLL5Q6EMB2 1281 aa17■□□□□ 0.31
TFE3-205ENST00000495940 RIC3Q7Z5B4 369 aa17■□□□□ 0.31
TFE3-205ENST00000495940 ARHGAP39Q9C0H5 1083 aa17■□□□□ 0.31
TFE3-205ENST00000495940 COA1Q9GZY4 146 aa17■□□□□ 0.31
TFE3-205ENST00000495940 ZNF804BA4D1E1 1349 aa16.99■□□□□ 0.31
TFE3-205ENST00000495940 ARAP2Q8WZ64 1704 aa16.99■□□□□ 0.31
TFE3-205ENST00000495940 CHL1O00533 1208 aa16.99■□□□□ 0.31
TFE3-205ENST00000495940 CTSWP56202 376 aa16.99■□□□□ 0.31
TFE3-205ENST00000495940 GTF2IP78347 998 aa16.99■□□□□ 0.31
TFE3-205ENST00000495940 CNKSR2Q8WXI2 1034 aa16.99■□□□□ 0.31
TFE3-205ENST00000495940 DPF3Q92784 378 aa16.99■□□□□ 0.31
TFE3-205ENST00000495940 OPTNQ96CV9 577 aa16.99■□□□□ 0.31
TFE3-205ENST00000495940 PRO3102Q9H379 93 aa16.99■□□□□ 0.31
TFE3-205ENST00000495940 PHAXQ9H814 394 aaKnown RBP16.99■□□□□ 0.31
TFE3-205ENST00000495940 ELP3Q9H9T3 547 aa16.99■□□□□ 0.31
TFE3-205ENST00000495940 HYPKQ9NX55 129 aa16.99■□□□□ 0.31
TFE3-205ENST00000495940 CUL9Q8IWT3 2517 aa16.98■□□□□ 0.31
TFE3-205ENST00000495940 SOX1O00570 391 aaPredicted RBP16.98■□□□□ 0.31
TFE3-205ENST00000495940 USP2O75604 605 aaPredicted RBP16.98■□□□□ 0.31
TFE3-205ENST00000495940 HSP90B1P14625 803 aaKnown RBP16.98■□□□□ 0.31
TFE3-205ENST00000495940 DLGAP5Q15398 846 aa16.98■□□□□ 0.31
TFE3-205ENST00000495940 TAF1CQ15572 869 aaPredicted RBP16.98■□□□□ 0.31
TFE3-205ENST00000495940 CERS5Q8N5B7 392 aa16.98■□□□□ 0.31
TFE3-205ENST00000495940 BRI3BPQ8WY22 251 aa16.98■□□□□ 0.31
TFE3-205ENST00000495940 MS4A4AQ96JQ5 239 aa16.98■□□□□ 0.31
TFE3-205ENST00000495940 CDC5LQ99459 802 aaKnown RBP16.98■□□□□ 0.31
TFE3-205ENST00000495940 GREM2Q9H772 168 aa16.98■□□□□ 0.31
TFE3-205ENST00000495940 IL16Q14005 1332 aa16.97■□□□□ 0.31
TFE3-205ENST00000495940 ECM2O94769 699 aaPredicted RBP16.97■□□□□ 0.31
TFE3-205ENST00000495940 HOXB7P09629 217 aa16.97■□□□□ 0.31
TFE3-205ENST00000495940 IREB2P48200 963 aaKnown RBP16.97■□□□□ 0.31
TFE3-205ENST00000495940 LMOD3Q0VAK6 560 aa16.97■□□□□ 0.31
TFE3-205ENST00000495940 MTFR1Q15390 333 aa16.97■□□□□ 0.31
TFE3-205ENST00000495940 NEUROD2Q15784 382 aa16.97■□□□□ 0.31
TFE3-205ENST00000495940 VEZTQ9HBM0 779 aa16.97■□□□□ 0.31
TFE3-205ENST00000495940 PPP2R3BQ9Y5P8 575 aa16.97■□□□□ 0.31
TFE3-205ENST00000495940 F8W031 263 aaPredicted RBP16.96■□□□□ 0.31
TFE3-205ENST00000495940 CCDC146Q8IYE0 955 aa16.96■□□□□ 0.31
TFE3-205ENST00000495940 ANKRD13AQ8IZ07 590 aa16.96■□□□□ 0.31
TFE3-205ENST00000495940 FAM43AQ8N2R8 423 aa16.96■□□□□ 0.31
TFE3-205ENST00000495940 CCDC191Q8NCU4 936 aa16.96■□□□□ 0.31
TFE3-205ENST00000495940 LRCH3Q96II8 777 aa16.96■□□□□ 0.31
TFE3-205ENST00000495940 BSDC1Q9NW68 430 aaPredicted RBP16.96■□□□□ 0.31
TFE3-205ENST00000495940 CWC25Q9NXE8 425 aaPredicted RBP16.96■□□□□ 0.31
TFE3-205ENST00000495940 UNC80Q8N2C7 3258 aa16.95■□□□□ 0.3
TFE3-205ENST00000495940 CCL15-CCL14A0A0B4J2E2 113 aa16.95■□□□□ 0.3
TFE3-205ENST00000495940 MMP14P50281 582 aa16.95■□□□□ 0.3
TFE3-205ENST00000495940 CCL15Q16663 113 aa16.95■□□□□ 0.3
TFE3-205ENST00000495940 CDAN1Q8IWY9 1227 aa16.95■□□□□ 0.3
TFE3-205ENST00000495940 ZFYVE28Q9HCC9 887 aa16.95■□□□□ 0.3
TFE3-205ENST00000495940 ALPK3Q96L96 1907 aa16.95■□□□□ 0.3
TFE3-205ENST00000495940 UNCXA6NJT0 531 aa16.94■□□□□ 0.3
TFE3-205ENST00000495940 SUPT20HL1Q3ZLR7 823 aa16.94■□□□□ 0.3
TFE3-205ENST00000495940 CFAP100Q494V2 611 aa16.94■□□□□ 0.3
TFE3-205ENST00000495940 C20orf194Q5TEA3 1177 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms