RNA–Protein interactions for RNA: ENST00000495749.1

TM9SF4-207, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 3,023 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-207ENST00000495749 GJB4Q9NTQ9 266 aa10.69□□□□□ -0.7
TM9SF4-207ENST00000495749 MED23Q9ULK4 1368 aa10.69□□□□□ -0.7
TM9SF4-207ENST00000495749 GTF2F1P35269 517 aaKnown RBP eCLIP10.68□□□□□ -0.7
TM9SF4-207ENST00000495749 INTS5Q6P9B9 1019 aaKnown RBP10.68□□□□□ -0.7
TM9SF4-207ENST00000495749 SLC51AQ86UW1 340 aa10.68□□□□□ -0.7
TM9SF4-207ENST00000495749 CCDC144CPQ8IYA2 1237 aa10.68□□□□□ -0.7
TM9SF4-207ENST00000495749 KCPQ6ZWJ8 1503 aa10.68□□□□□ -0.7
TM9SF4-207ENST00000495749 PHLPP1O60346 1717 aa10.68□□□□□ -0.7
TM9SF4-207ENST00000495749 CRYBG1Q9Y4K1 1723 aa10.68□□□□□ -0.7
TM9SF4-207ENST00000495749 NPHP1O15259 732 aa10.68□□□□□ -0.7
TM9SF4-207ENST00000495749 ANO6Q4KMQ2 910 aa10.68□□□□□ -0.7
TM9SF4-207ENST00000495749 DRC7Q8IY82 874 aa10.68□□□□□ -0.7
TM9SF4-207ENST00000495749 NKX2-3Q8TAU0 364 aa10.68□□□□□ -0.7
TM9SF4-207ENST00000495749 FTOQ9C0B1 505 aaKnown RBP eCLIP10.68□□□□□ -0.7
TM9SF4-207ENST00000495749 TOMM22Q9NS69 142 aa10.68□□□□□ -0.7
TM9SF4-207ENST00000495749 CCDC87Q9NVE4 849 aa10.68□□□□□ -0.7
TM9SF4-207ENST00000495749 RIPOR2Q9Y4F9 1068 aa10.68□□□□□ -0.7
TM9SF4-207ENST00000495749 U3KPZ7 1027 aaPredicted RBP10.68□□□□□ -0.7
TM9SF4-207ENST00000495749 E7EWF7 191 aa10.68□□□□□ -0.7
TM9SF4-207ENST00000495749 FGAP02671 866 aa10.68□□□□□ -0.7
TM9SF4-207ENST00000495749 BCAMP50895 628 aa10.68□□□□□ -0.7
TM9SF4-207ENST00000495749 CHAF1AQ13111 956 aaPredicted RBP10.68□□□□□ -0.7
TM9SF4-207ENST00000495749 SCAND2PQ9GZW5 306 aaPredicted RBP10.68□□□□□ -0.7
TM9SF4-207ENST00000495749 BCL2L12Q9HB09 334 aa10.68□□□□□ -0.7
TM9SF4-207ENST00000495749 PIH1D3Q9NQM4 214 aaKnown RBP10.68□□□□□ -0.7
TM9SF4-207ENST00000495749 SPATA31A1Q5TZJ5 1347 aa10.67□□□□□ -0.7
TM9SF4-207ENST00000495749 H3BQV1 296 aa10.67□□□□□ -0.7
TM9SF4-207ENST00000495749 TPM3P06753 285 aa10.67□□□□□ -0.7
TM9SF4-207ENST00000495749 ANKRD1Q15327 319 aa10.67□□□□□ -0.7
TM9SF4-207ENST00000495749 ZMYM1Q5SVZ6 1142 aa10.67□□□□□ -0.7
TM9SF4-207ENST00000495749 IFFO2Q5TF58 517 aa10.67□□□□□ -0.7
TM9SF4-207ENST00000495749 PAXIP1Q6ZW49 1069 aaPredicted RBP10.67□□□□□ -0.7
TM9SF4-207ENST00000495749 CCDC186Q7Z3E2 898 aa10.67□□□□□ -0.7
TM9SF4-207ENST00000495749 CBX8Q9HC52 389 aa10.67□□□□□ -0.7
TM9SF4-207ENST00000495749 ABCF2Q9UG63 623 aa10.67□□□□□ -0.7
TM9SF4-207ENST00000495749 SRP68Q9UHB9 627 aaKnown RBP10.67□□□□□ -0.7
TM9SF4-207ENST00000495749 WWC3Q9ULE0 1092 aa10.67□□□□□ -0.7
TM9SF4-207ENST00000495749 AKAP2Q9Y2D5 859 aa10.67□□□□□ -0.7
TM9SF4-207ENST00000495749 ELP1O95163 1332 aa10.67□□□□□ -0.7
TM9SF4-207ENST00000495749 SIPA1L3O60292 1781 aaPredicted RBP10.67□□□□□ -0.7
TM9SF4-207ENST00000495749 BCL9O00512 1426 aa10.67□□□□□ -0.7
TM9SF4-207ENST00000495749 RIOK3O14730 519 aaKnown RBP10.67□□□□□ -0.7
TM9SF4-207ENST00000495749 CSF1RP07333 972 aa10.67□□□□□ -0.7
TM9SF4-207ENST00000495749 SCRN1Q12765 414 aa10.67□□□□□ -0.7
TM9SF4-207ENST00000495749 SLC4A8Q2Y0W8 1093 aa10.67□□□□□ -0.7
TM9SF4-207ENST00000495749 CCDC102BQ68D86 513 aa10.67□□□□□ -0.7
TM9SF4-207ENST00000495749 C3orf67Q6ZVT6 689 aa10.67□□□□□ -0.7
TM9SF4-207ENST00000495749 MIGA1Q8NAN2 632 aa10.67□□□□□ -0.7
TM9SF4-207ENST00000495749 BICD2Q8TD16 824 aa10.67□□□□□ -0.7
TM9SF4-207ENST00000495749 LEO1Q8WVC0 666 aaPredicted RBP10.67□□□□□ -0.7
TM9SF4-207ENST00000495749 TRIM5Q9C035 493 aa10.67□□□□□ -0.7
TM9SF4-207ENST00000495749 MRC1P22897 1456 aa10.66□□□□□ -0.7
TM9SF4-207ENST00000495749 PDE8AO60658 829 aa10.66□□□□□ -0.7
TM9SF4-207ENST00000495749 LRMPQ12912 555 aa10.66□□□□□ -0.7
TM9SF4-207ENST00000495749 FBXW7Q969H0 707 aa10.66□□□□□ -0.7
TM9SF4-207ENST00000495749 NRBP1Q9UHY1 535 aa10.66□□□□□ -0.7
TM9SF4-207ENST00000495749 GPAA1O43292 621 aa10.66□□□□□ -0.7
TM9SF4-207ENST00000495749 NR1I2O75469 434 aa10.66□□□□□ -0.7
TM9SF4-207ENST00000495749 PDE8BO95263 885 aa10.66□□□□□ -0.7
TM9SF4-207ENST00000495749 RRP12Q5JTH9 1297 aaKnown RBP10.66□□□□□ -0.7
TM9SF4-207ENST00000495749 CCDC82Q8N4S0 544 aa10.66□□□□□ -0.7
TM9SF4-207ENST00000495749 IL6STP40189 918 aaPredicted RBP10.66□□□□□ -0.7
TM9SF4-207ENST00000495749 EIF5P55010 431 aaKnown RBP10.66□□□□□ -0.7
TM9SF4-207ENST00000495749 CBX1P83916 185 aa10.66□□□□□ -0.7
TM9SF4-207ENST00000495749 TRIM28Q13263 835 aaKnown RBP10.66□□□□□ -0.7
TM9SF4-207ENST00000495749 PPP4R3BQ5MIZ7 849 aa10.66□□□□□ -0.7
TM9SF4-207ENST00000495749 UTP14AQ9BVJ6 771 aaKnown RBP10.66□□□□□ -0.7
TM9SF4-207ENST00000495749 SH3TC1Q8TE82 1336 aa10.65□□□□□ -0.7
TM9SF4-207ENST00000495749 CIAO1O76071 339 aa10.65□□□□□ -0.7
TM9SF4-207ENST00000495749 PGBD1Q96JS3 809 aa10.65□□□□□ -0.7
TM9SF4-207ENST00000495749 DNAJC25Q9H1X3 360 aa10.65□□□□□ -0.7
TM9SF4-207ENST00000495749 DDX19AQ9NUU7 478 aaKnown RBP10.65□□□□□ -0.7
TM9SF4-207ENST00000495749 PRDM4Q9UKN5 801 aa10.65□□□□□ -0.7
TM9SF4-207ENST00000495749 SMIM22K7EJ46 135 aa10.65□□□□□ -0.71
TM9SF4-207ENST00000495749 PRKAB2O43741 272 aa10.65□□□□□ -0.71
TM9SF4-207ENST00000495749 ZNF165P49910 485 aa10.65□□□□□ -0.71
TM9SF4-207ENST00000495749 DHX32Q7L7V1 743 aaKnown RBP10.65□□□□□ -0.71
TM9SF4-207ENST00000495749 SMAP1Q8IYB5 467 aaPredicted RBP10.65□□□□□ -0.71
TM9SF4-207ENST00000495749 MYL10Q9BUA6 226 aa10.65□□□□□ -0.71
TM9SF4-207ENST00000495749 CLSTN2Q9H4D0 955 aa10.65□□□□□ -0.71
TM9SF4-207ENST00000495749 HMG20BQ9P0W2 317 aa10.65□□□□□ -0.71
TM9SF4-207ENST00000495749 A0A087WWV3 80 aa10.64□□□□□ -0.71
TM9SF4-207ENST00000495749 GYG1P46976 350 aa10.64□□□□□ -0.71
TM9SF4-207ENST00000495749 ERFEQ4G0M1 354 aa10.64□□□□□ -0.71
TM9SF4-207ENST00000495749 MAGEB6Q8N7X4 407 aa10.64□□□□□ -0.71
TM9SF4-207ENST00000495749 C16orf45Q96MC5 204 aaPredicted RBP10.64□□□□□ -0.71
TM9SF4-207ENST00000495749 ZKSCAN3Q9BRR0 538 aa10.64□□□□□ -0.71
TM9SF4-207ENST00000495749 ZNF532Q9HCE3 1301 aa10.64□□□□□ -0.71
TM9SF4-207ENST00000495749 TNS2Q63HR2 1409 aa10.64□□□□□ -0.71
TM9SF4-207ENST00000495749 PALLDQ8WX93 1383 aa10.64□□□□□ -0.71
TM9SF4-207ENST00000495749 FOXP2O15409 715 aa10.64□□□□□ -0.71
TM9SF4-207ENST00000495749 KRT32Q14532 448 aa10.64□□□□□ -0.71
TM9SF4-207ENST00000495749 USPL1Q5W0Q7 1092 aa10.64□□□□□ -0.71
TM9SF4-207ENST00000495749 ZNF34Q8IZ26 560 aa10.64□□□□□ -0.71
TM9SF4-207ENST00000495749 ARMT1Q9H993 441 aa10.64□□□□□ -0.71
TM9SF4-207ENST00000495749 HELLSQ9NRZ9 838 aa10.64□□□□□ -0.71
TM9SF4-207ENST00000495749 ZNF75DP51815 510 aa10.63□□□□□ -0.71
TM9SF4-207ENST00000495749 AMIGO3Q86WK7 504 aa10.63□□□□□ -0.71
TM9SF4-207ENST00000495749 LINC00116Q8NCU8 138 aa10.63□□□□□ -0.71
TM9SF4-207ENST00000495749 ERCC4Q92889 916 aaPredicted RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms