RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 REXO1L1PQ8IX06 675 aa17.85■□□□□ 0.45
SDF4-207ENST00000494748 MROH7-TTC4A0A0A0MT08 1334 aa17.85■□□□□ 0.45
SDF4-207ENST00000494748 AMOTQ4VCS5 1084 aa17.85■□□□□ 0.45
SDF4-207ENST00000494748 FBXL16Q8N461 479 aa17.85■□□□□ 0.45
SDF4-207ENST00000494748 SLIT3O75094 1523 aa17.85■□□□□ 0.45
SDF4-207ENST00000494748 TUBB4AP04350 444 aa17.85■□□□□ 0.45
SDF4-207ENST00000494748 ATP1A3P13637 1013 aa17.85■□□□□ 0.45
SDF4-207ENST00000494748 AXDND1Q5T1B0 1012 aaPredicted RBP17.85■□□□□ 0.45
SDF4-207ENST00000494748 SDF4Q9BRK5 362 aa17.85■□□□□ 0.45
SDF4-207ENST00000494748 METTL22Q9BUU2 404 aaPredicted RBP17.85■□□□□ 0.45
SDF4-207ENST00000494748 TJP1Q07157 1748 aa17.85■□□□□ 0.45
SDF4-207ENST00000494748 GLI3P10071 1580 aa17.84■□□□□ 0.45
SDF4-207ENST00000494748 OTUD7BQ6GQQ9 843 aa17.84■□□□□ 0.45
SDF4-207ENST00000494748 DPF2Q92785 391 aa17.84■□□□□ 0.45
SDF4-207ENST00000494748 POLR3EQ9NVU0 708 aa17.84■□□□□ 0.45
SDF4-207ENST00000494748 PARP3Q9Y6F1 533 aa17.84■□□□□ 0.45
SDF4-207ENST00000494748 CHST3Q7LGC8 479 aa17.84■□□□□ 0.45
SDF4-207ENST00000494748 TMEM139Q8IV31 216 aa17.84■□□□□ 0.45
SDF4-207ENST00000494748 GPHNQ9NQX3 736 aaPredicted RBP17.84■□□□□ 0.45
SDF4-207ENST00000494748 KCNA6P17658 529 aa17.84■□□□□ 0.45
SDF4-207ENST00000494748 RIC3Q7Z5B4 369 aa17.84■□□□□ 0.45
SDF4-207ENST00000494748 FANCCQ00597 558 aa17.83■□□□□ 0.45
SDF4-207ENST00000494748 MYD88Q99836 296 aa17.83■□□□□ 0.45
SDF4-207ENST00000494748 BIN1O00499 593 aa17.83■□□□□ 0.44
SDF4-207ENST00000494748 CALCOCO1Q9P1Z2 691 aa17.83■□□□□ 0.44
SDF4-207ENST00000494748 EID1Q9Y6B2 187 aa17.83■□□□□ 0.44
SDF4-207ENST00000494748 KIF28PB7ZC32 967 aa17.82■□□□□ 0.44
SDF4-207ENST00000494748 IKBKBO14920 756 aa17.82■□□□□ 0.44
SDF4-207ENST00000494748 SASH3O75995 380 aa17.82■□□□□ 0.44
SDF4-207ENST00000494748 YEATS4O95619 227 aa17.82■□□□□ 0.44
SDF4-207ENST00000494748 HSPD1P10809 573 aaKnown RBP17.82■□□□□ 0.44
SDF4-207ENST00000494748 HNRNPH2P55795 449 aaKnown RBP17.82■□□□□ 0.44
SDF4-207ENST00000494748 ZMYM1Q5SVZ6 1142 aa17.82■□□□□ 0.44
SDF4-207ENST00000494748 HELLSQ9NRZ9 838 aa17.82■□□□□ 0.44
SDF4-207ENST00000494748 DNAI1Q9UI46 699 aa17.82■□□□□ 0.44
SDF4-207ENST00000494748 FOXP2O15409 715 aa17.82■□□□□ 0.44
SDF4-207ENST00000494748 ZNF202O95125 648 aa17.82■□□□□ 0.44
SDF4-207ENST00000494748 CASP7P55210 303 aa17.82■□□□□ 0.44
SDF4-207ENST00000494748 XAGE3Q8WTP9 111 aa17.82■□□□□ 0.44
SDF4-207ENST00000494748 C1orf141Q5JVX7 400 aa17.82■□□□□ 0.44
SDF4-207ENST00000494748 NFATC2IPQ8NCF5 419 aa17.82■□□□□ 0.44
SDF4-207ENST00000494748 SLC20A2Q08357 652 aa17.81■□□□□ 0.44
SDF4-207ENST00000494748 GJB4Q9NTQ9 266 aa17.81■□□□□ 0.44
SDF4-207ENST00000494748 SEC31AO94979 1220 aaKnown RBP17.81■□□□□ 0.44
SDF4-207ENST00000494748 SLC3A2P08195 630 aaKnown RBP17.81■□□□□ 0.44
SDF4-207ENST00000494748 LMOD1P29536 600 aaPredicted RBP17.81■□□□□ 0.44
SDF4-207ENST00000494748 KCNG4Q8TDN1 519 aa17.81■□□□□ 0.44
SDF4-207ENST00000494748 TUBE1Q9UJT0 475 aa17.81■□□□□ 0.44
SDF4-207ENST00000494748 HPS5Q9UPZ3 1129 aa17.81■□□□□ 0.44
SDF4-207ENST00000494748 MAST3O60307 1309 aa17.81■□□□□ 0.44
SDF4-207ENST00000494748 WDHD1O75717 1129 aaPredicted RBP17.81■□□□□ 0.44
SDF4-207ENST00000494748 TBC1D8O95759 1140 aa17.81■□□□□ 0.44
SDF4-207ENST00000494748 CEBPAP49715 358 aaPredicted RBP17.81■□□□□ 0.44
SDF4-207ENST00000494748 C14orf37Q86TY3 774 aa17.81■□□□□ 0.44
SDF4-207ENST00000494748 KDM6AO15550 1401 aaPredicted RBP17.81■□□□□ 0.44
SDF4-207ENST00000494748 LAMB4A4D0S4 1761 aa17.81■□□□□ 0.44
SDF4-207ENST00000494748 VWA3AA6NCI4 1184 aa17.8■□□□□ 0.44
SDF4-207ENST00000494748 SPTLC2O15270 562 aa17.8■□□□□ 0.44
SDF4-207ENST00000494748 PFKFB1P16118 471 aa17.8■□□□□ 0.44
SDF4-207ENST00000494748 MYSM1Q5VVJ2 828 aa17.8■□□□□ 0.44
SDF4-207ENST00000494748 COPS6Q7L5N1 327 aa17.8■□□□□ 0.44
SDF4-207ENST00000494748 NUP188Q5SRE5 1749 aa17.8■□□□□ 0.44
SDF4-207ENST00000494748 MYH7P12883 1935 aa17.8■□□□□ 0.44
SDF4-207ENST00000494748 MYL6BP14649 208 aa17.8■□□□□ 0.44
SDF4-207ENST00000494748 PSME1Q06323 249 aa17.8■□□□□ 0.44
SDF4-207ENST00000494748 INTS13Q9NVM9 706 aa17.8■□□□□ 0.44
SDF4-207ENST00000494748 PHF8Q9UPP1 1060 aa17.8■□□□□ 0.44
SDF4-207ENST00000494748 KIF1AQ12756 1690 aa17.8■□□□□ 0.44
SDF4-207ENST00000494748 TMEM94Q12767 1356 aa17.8■□□□□ 0.44
SDF4-207ENST00000494748 POLR3DP05423 398 aaPredicted RBP17.8■□□□□ 0.44
SDF4-207ENST00000494748 GOLGA8FQ08AF8 430 aa17.8■□□□□ 0.44
SDF4-207ENST00000494748 GOLGA8DPQ0D2H9 430 aa17.8■□□□□ 0.44
SDF4-207ENST00000494748 GORABQ5T7V8 394 aa17.8■□□□□ 0.44
SDF4-207ENST00000494748 TTLL5Q6EMB2 1281 aa17.8■□□□□ 0.44
SDF4-207ENST00000494748 FMNL2Q96PY5 1086 aa17.8■□□□□ 0.44
SDF4-207ENST00000494748 EPC1Q9H2F5 836 aa17.8■□□□□ 0.44
SDF4-207ENST00000494748 DHX8Q14562 1220 aaKnown RBP17.79■□□□□ 0.44
SDF4-207ENST00000494748 FBXO18Q8NFZ0 1043 aa17.79■□□□□ 0.44
SDF4-207ENST00000494748 EFCAB8A8MWE9 144 aa17.79■□□□□ 0.44
SDF4-207ENST00000494748 STK38Q15208 465 aa17.79■□□□□ 0.44
SDF4-207ENST00000494748 PLPPR3Q6T4P5 718 aa17.79■□□□□ 0.44
SDF4-207ENST00000494748 ATG9AQ7Z3C6 839 aa17.79■□□□□ 0.44
SDF4-207ENST00000494748 PAG1Q9NWQ8 432 aa17.79■□□□□ 0.44
SDF4-207ENST00000494748 TMEM232C9JQI7 657 aa17.78■□□□□ 0.44
SDF4-207ENST00000494748 GOLIM4O00461 696 aa17.78■□□□□ 0.44
SDF4-207ENST00000494748 CMA1P23946 247 aa17.78■□□□□ 0.44
SDF4-207ENST00000494748 NEXNQ0ZGT2 675 aa17.78■□□□□ 0.44
SDF4-207ENST00000494748 SLC39A6Q13433 755 aa17.78■□□□□ 0.44
SDF4-207ENST00000494748 CARD6Q9BX69 1037 aa17.78■□□□□ 0.44
SDF4-207ENST00000494748 HPSEQ9Y251 543 aa17.78■□□□□ 0.44
SDF4-207ENST00000494748 M0R2C6 588 aa17.78■□□□□ 0.44
SDF4-207ENST00000494748 ST5P78524 1137 aa17.78■□□□□ 0.44
SDF4-207ENST00000494748 CCDC158Q5M9N0 1113 aa17.78■□□□□ 0.44
SDF4-207ENST00000494748 VSTM4Q8IW00 320 aa17.78■□□□□ 0.44
SDF4-207ENST00000494748 LRRFIP1Q32MZ4 808 aaKnown RBP17.78■□□□□ 0.44
SDF4-207ENST00000494748 ZNF790Q6PG37 636 aa17.78■□□□□ 0.44
SDF4-207ENST00000494748 UBXN4Q92575 508 aa17.78■□□□□ 0.44
SDF4-207ENST00000494748 PTPN21Q16825 1174 aa17.77■□□□□ 0.44
SDF4-207ENST00000494748 TMCO3Q6UWJ1 677 aa17.77■□□□□ 0.44
SDF4-207ENST00000494748 UBE3BQ7Z3V4 1068 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 307.9 ms