RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 ZNF589Q86UQ0 364 aaPredicted RBP13.45□□□□□ -0.26
RFC4-214ENST00000494047 NECAB1Q8N987 351 aa13.45□□□□□ -0.26
RFC4-214ENST00000494047 KCNG4Q8TDN1 519 aa13.45□□□□□ -0.26
RFC4-214ENST00000494047 BRF1Q92994 677 aa13.45□□□□□ -0.26
RFC4-214ENST00000494047 MRFAP1L1Q96HT8 127 aa13.45□□□□□ -0.26
RFC4-214ENST00000494047 NOL10Q9BSC4 688 aaKnown RBP13.45□□□□□ -0.26
RFC4-214ENST00000494047 DACT1Q9NYF0 836 aa13.45□□□□□ -0.26
RFC4-214ENST00000494047 TLR7Q9NYK1 1049 aaKnown RBP13.45□□□□□ -0.26
RFC4-214ENST00000494047 RCOR1Q9UKL0 485 aa13.45□□□□□ -0.26
RFC4-214ENST00000494047 ASAP1Q9ULH1 1129 aa13.45□□□□□ -0.26
RFC4-214ENST00000494047 PAXBP1Q9Y5B6 917 aa13.45□□□□□ -0.26
RFC4-214ENST00000494047 MRVI1Q9Y6F6 885 aa13.45□□□□□ -0.26
RFC4-214ENST00000494047 MYH7P12883 1935 aa13.44□□□□□ -0.26
RFC4-214ENST00000494047 PNPLA7Q6ZV29 1317 aa13.44□□□□□ -0.26
RFC4-214ENST00000494047 A0A1W2PQ27 194 aa13.44□□□□□ -0.26
RFC4-214ENST00000494047 A0A1W2PQ64 194 aa13.44□□□□□ -0.26
RFC4-214ENST00000494047 A0A1W2PQD8 194 aa13.44□□□□□ -0.26
RFC4-214ENST00000494047 RNF113AO15541 343 aaKnown RBP13.44□□□□□ -0.26
RFC4-214ENST00000494047 CDKL5O76039 1030 aa13.44□□□□□ -0.26
RFC4-214ENST00000494047 CYP21A2P08686 494 aa13.44□□□□□ -0.26
RFC4-214ENST00000494047 PRKCSHP14314 528 aaPredicted RBP13.44□□□□□ -0.26
RFC4-214ENST00000494047 CPA1P15085 419 aa13.44□□□□□ -0.26
RFC4-214ENST00000494047 ATP6V1AP38606 617 aa13.44□□□□□ -0.26
RFC4-214ENST00000494047 GSDMDP57764 484 aa13.44□□□□□ -0.26
RFC4-214ENST00000494047 ZRSR1Q15695 479 aaKnown RBP13.44□□□□□ -0.26
RFC4-214ENST00000494047 HSP90AB3PQ58FF7 597 aa13.44□□□□□ -0.26
RFC4-214ENST00000494047 DNAJC2Q99543 621 aaKnown RBP13.44□□□□□ -0.26
RFC4-214ENST00000494047 PLA2G12BQ9BX93 195 aa13.44□□□□□ -0.26
RFC4-214ENST00000494047 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.44□□□□□ -0.267e-9■■□□□ 11.5
RFC4-214ENST00000494047 CARMIL3Q8ND23 1372 aa13.43□□□□□ -0.26
RFC4-214ENST00000494047 KCPQ6ZWJ8 1503 aa13.43□□□□□ -0.26
RFC4-214ENST00000494047 ZBTB7AO95365 584 aa13.43□□□□□ -0.26
RFC4-214ENST00000494047 ZNF165P49910 485 aa13.43□□□□□ -0.26
RFC4-214ENST00000494047 KCNQ4P56696 695 aa13.43□□□□□ -0.26
RFC4-214ENST00000494047 FAM160A1Q05DH4 1040 aa13.43□□□□□ -0.26
RFC4-214ENST00000494047 TTF1Q15361 905 aaPredicted RBP13.43□□□□□ -0.26
RFC4-214ENST00000494047 IMMTQ16891 758 aaKnown RBP13.43□□□□□ -0.26
RFC4-214ENST00000494047 PLA2G4DQ86XP0 818 aa13.43□□□□□ -0.26
RFC4-214ENST00000494047 CEP57L1Q8IYX8 460 aa13.43□□□□□ -0.26
RFC4-214ENST00000494047 VSIG10Q8N0Z9 540 aa13.43□□□□□ -0.26
RFC4-214ENST00000494047 CHAMP1Q96JM3 812 aa13.43□□□□□ -0.26
RFC4-214ENST00000494047 ZNF512BQ96KM6 892 aaPredicted RBP13.43□□□□□ -0.26
RFC4-214ENST00000494047 AK7Q96M32 723 aa13.43□□□□□ -0.26
RFC4-214ENST00000494047 DDX60Q8IY21 1712 aaKnown RBP13.43□□□□□ -0.26
RFC4-214ENST00000494047 SALL1Q9NSC2 1324 aa13.42□□□□□ -0.26
RFC4-214ENST00000494047 C4BP0C0L5 1744 aa13.42□□□□□ -0.26
RFC4-214ENST00000494047 YEATS4O95619 227 aa13.42□□□□□ -0.26
RFC4-214ENST00000494047 IFIT1P09914 478 aaKnown RBP13.42□□□□□ -0.26
RFC4-214ENST00000494047 PTGER2P43116 358 aa13.42□□□□□ -0.26
RFC4-214ENST00000494047 SLC39A6Q13433 755 aa13.42□□□□□ -0.26
RFC4-214ENST00000494047 ANO6Q4KMQ2 910 aa13.42□□□□□ -0.26
RFC4-214ENST00000494047 CPLX2Q6PUV4 134 aaKnown RBP13.42□□□□□ -0.26
RFC4-214ENST00000494047 LMBR1LQ6UX01 489 aa13.42□□□□□ -0.26
RFC4-214ENST00000494047 PDCL2Q8N4E4 241 aa13.42□□□□□ -0.26
RFC4-214ENST00000494047 NSUN7Q8NE18 718 aaKnown RBP13.42□□□□□ -0.26
RFC4-214ENST00000494047 BPIFA3Q9BQP9 254 aa13.42□□□□□ -0.26
RFC4-214ENST00000494047 DBNDD2Q9BQY9 259 aa13.42□□□□□ -0.26
RFC4-214ENST00000494047 PDGFDQ9GZP0 370 aaPredicted RBP13.42□□□□□ -0.26
RFC4-214ENST00000494047 CEP126Q9P2H0 1117 aa13.42□□□□□ -0.26
RFC4-214ENST00000494047 ZMYM6O95789 1325 aa13.41□□□□□ -0.26
RFC4-214ENST00000494047 PRAMEF22A3QJZ6 481 aa13.41□□□□□ -0.26
RFC4-214ENST00000494047 CCP110O43303 1012 aa13.41□□□□□ -0.26
RFC4-214ENST00000494047 POLD1P28340 1107 aa13.41□□□□□ -0.26
RFC4-214ENST00000494047 FOXO4P98177 505 aa13.41□□□□□ -0.26
RFC4-214ENST00000494047 EXOSC10Q01780 885 aaKnown RBP13.41□□□□□ -0.26
RFC4-214ENST00000494047 CCDC57Q2TAC2 916 aa13.41□□□□□ -0.26
RFC4-214ENST00000494047 EPHA10Q5JZY3 1008 aa13.41□□□□□ -0.26
RFC4-214ENST00000494047 RC3H1Q5TC82 1133 aaKnown RBP13.41□□□□□ -0.26
RFC4-214ENST00000494047 JMYQ8N9B5 988 aa13.41□□□□□ -0.26
RFC4-214ENST00000494047 TRIM5Q9C035 493 aa13.41□□□□□ -0.26
RFC4-214ENST00000494047 CBX8Q9HC52 389 aa13.41□□□□□ -0.26
RFC4-214ENST00000494047 IMPACTQ9P2X3 320 aa13.41□□□□□ -0.26
RFC4-214ENST00000494047 ATF5Q9Y2D1 282 aaPredicted RBP13.41□□□□□ -0.26
RFC4-214ENST00000494047 CDHR2Q9BYE9 1310 aa13.4□□□□□ -0.26
RFC4-214ENST00000494047 PTPDC1A2A3K4 754 aa13.4□□□□□ -0.26
RFC4-214ENST00000494047 BECN2A8MW95 431 aa13.4□□□□□ -0.26
RFC4-214ENST00000494047 LIG1P18858 919 aa13.4□□□□□ -0.26
RFC4-214ENST00000494047 KCNJ6P48051 423 aa13.4□□□□□ -0.26
RFC4-214ENST00000494047 ZNF75DP51815 510 aa13.4□□□□□ -0.26
RFC4-214ENST00000494047 PLCB2Q00722 1185 aa13.4□□□□□ -0.26
RFC4-214ENST00000494047 SCRN1Q12765 414 aa13.4□□□□□ -0.26
RFC4-214ENST00000494047 COL24A1Q17RW2 1714 aa13.4□□□□□ -0.26
RFC4-214ENST00000494047 FERMT3Q86UX7 667 aa13.4□□□□□ -0.26
RFC4-214ENST00000494047 DRC7Q8IY82 874 aa13.4□□□□□ -0.26
RFC4-214ENST00000494047 SGIP1Q9BQI5 828 aa13.4□□□□□ -0.26
RFC4-214ENST00000494047 KCND1Q9NSA2 647 aa13.4□□□□□ -0.26
RFC4-214ENST00000494047 POLR3EQ9NVU0 708 aa13.4□□□□□ -0.26
RFC4-214ENST00000494047 FAM13BQ9NYF5 915 aa13.4□□□□□ -0.26
RFC4-214ENST00000494047 USP16Q9Y5T5 823 aa13.4□□□□□ -0.26
RFC4-214ENST00000494047 UBR3Q6ZT12 1888 aa13.39□□□□□ -0.27
RFC4-214ENST00000494047 DCAF8L1A6NGE4 600 aa13.39□□□□□ -0.27
RFC4-214ENST00000494047 HSPD1P10809 573 aaKnown RBP13.39□□□□□ -0.27
RFC4-214ENST00000494047 TRDNQ13061 729 aa13.39□□□□□ -0.27
RFC4-214ENST00000494047 ADALQ6DHV7 355 aa13.39□□□□□ -0.27
RFC4-214ENST00000494047 KIF6Q6ZMV9 814 aa13.39□□□□□ -0.27
RFC4-214ENST00000494047 ATG9AQ7Z3C6 839 aa13.39□□□□□ -0.27
RFC4-214ENST00000494047 RALYLQ86SE5 291 aaKnown RBP13.39□□□□□ -0.27
RFC4-214ENST00000494047 COL23A1Q86Y22 540 aaPredicted RBP13.39□□□□□ -0.27
RFC4-214ENST00000494047 MRPS27Q92552 414 aaKnown RBP13.39□□□□□ -0.27
RFC4-214ENST00000494047 APPBP2Q92624 585 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms