RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, human

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MCF2L-231	ENST00000494043	IL1R1	P14778	569 aa		13.82	□□□□□ -0.2
MCF2L-231	ENST00000494043	CHML	P26374	656 aa		13.82	□□□□□ -0.2
MCF2L-231	ENST00000494043	TICAM2	Q86XR7	235 aa		13.82	□□□□□ -0.2
MCF2L-231	ENST00000494043	COA1	Q9GZY4	146 aa		13.82	□□□□□ -0.2
MCF2L-231	ENST00000494043	PIH1D3	Q9NQM4	214 aa	Known RBP	13.82	□□□□□ -0.2
MCF2L-231	ENST00000494043	SRCAP	Q6ZRS2	3230 aa		13.82	□□□□□ -0.2
MCF2L-231	ENST00000494043	HIP1	O00291	1037 aa		13.81	□□□□□ -0.2
MCF2L-231	ENST00000494043	KIAA2012	Q0VF49	1180 aa		13.81	□□□□□ -0.2
MCF2L-231	ENST00000494043	SYT17	Q9BSW7	474 aa		13.81	□□□□□ -0.2
MCF2L-231	ENST00000494043	DIAPH3	Q9NSV4	1193 aa		13.81	□□□□□ -0.2
MCF2L-231	ENST00000494043	ARFGEF1	Q9Y6D6	1849 aa		13.8	□□□□□ -0.2
MCF2L-231	ENST00000494043	MYH13	Q9UKX3	1938 aa		13.8	□□□□□ -0.2
MCF2L-231	ENST00000494043	CHAF1A	Q13111	956 aa	Predicted RBP	13.8	□□□□□ -0.2
MCF2L-231	ENST00000494043	GOLGB1	Q14789	3259 aa	Known RBP	13.79	□□□□□ -0.2
MCF2L-231	ENST00000494043	DOCK2	Q92608	1830 aa		13.79	□□□□□ -0.2
MCF2L-231	ENST00000494043	FER1L6	Q2WGJ9	1857 aa		13.79	□□□□□ -0.2
MCF2L-231	ENST00000494043	PPIP5K2	O43314	1243 aa		13.79	□□□□□ -0.2
MCF2L-231	ENST00000494043	AOC3	Q16853	763 aa		13.79	□□□□□ -0.2
MCF2L-231	ENST00000494043	DOK7	Q18PE1	504 aa		13.79	□□□□□ -0.2
MCF2L-231	ENST00000494043	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.79	□□□□□ -0.2
MCF2L-231	ENST00000494043	ESYT1	Q9BSJ8	1104 aa		13.79	□□□□□ -0.2
MCF2L-231	ENST00000494043	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.79	□□□□□ -0.2
MCF2L-231	ENST00000494043	VPS33B	Q9H267	617 aa		13.79	□□□□□ -0.2
MCF2L-231	ENST00000494043	TAOK3	Q9H2K8	898 aa		13.79	□□□□□ -0.2
MCF2L-231	ENST00000494043	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.79	□□□□□ -0.2
MCF2L-231	ENST00000494043	SALL1	Q9NSC2	1324 aa		13.79	□□□□□ -0.2
MCF2L-231	ENST00000494043		G3V3G9	751 aa		13.78	□□□□□ -0.2
MCF2L-231	ENST00000494043	NFKBIE	O00221	500 aa		13.78	□□□□□ -0.2
MCF2L-231	ENST00000494043	RNF113A	O15541	343 aa	Known RBP	13.78	□□□□□ -0.2
MCF2L-231	ENST00000494043	IDH1	O75874	414 aa	Known RBP	13.78	□□□□□ -0.2
MCF2L-231	ENST00000494043	ZFY	P08048	801 aa	Predicted RBP	13.78	□□□□□ -0.2
MCF2L-231	ENST00000494043	NMI	Q13287	307 aa	Predicted RBP	13.78	□□□□□ -0.2
MCF2L-231	ENST00000494043	DCAF8	Q5TAQ9	597 aa		13.78	□□□□□ -0.2
MCF2L-231	ENST00000494043	PODN	Q7Z5L7	613 aa		13.78	□□□□□ -0.2
MCF2L-231	ENST00000494043	WDR66	Q8TBY9	1149 aa		13.78	□□□□□ -0.2
MCF2L-231	ENST00000494043	DBNDD1	Q9H9R9	158 aa		13.78	□□□□□ -0.2
MCF2L-231	ENST00000494043	FAM205A	Q6ZU69	1335 aa		13.78	□□□□□ -0.2
MCF2L-231	ENST00000494043	LTBP3	Q9NS15	1303 aa		13.78	□□□□□ -0.2
MCF2L-231	ENST00000494043		A0A0D9SFI3	127 aa		13.77	□□□□□ -0.21
MCF2L-231	ENST00000494043	ECE2	O60344	883 aa		13.77	□□□□□ -0.21
MCF2L-231	ENST00000494043	EIF5B	O60841	1220 aa	Known RBP	13.77	□□□□□ -0.21
MCF2L-231	ENST00000494043	MAP3K12	Q12852	859 aa		13.77	□□□□□ -0.21
MCF2L-231	ENST00000494043	ZSCAN25	Q6NSZ9	544 aa		13.77	□□□□□ -0.21
MCF2L-231	ENST00000494043	CWC27	Q6UX04	472 aa	Known RBP	13.77	□□□□□ -0.21
MCF2L-231	ENST00000494043	ZGPAT	Q8N5A5	531 aa	Known RBP	13.77	□□□□□ -0.21
MCF2L-231	ENST00000494043	RUFY2	Q8WXA3	655 aa		13.77	□□□□□ -0.21
MCF2L-231	ENST00000494043	RAD50	Q92878	1312 aa		13.77	□□□□□ -0.21
MCF2L-231	ENST00000494043	FAM227B	Q96M60	508 aa		13.77	□□□□□ -0.21
MCF2L-231	ENST00000494043	LRP2BP	Q9P2M1	347 aa		13.77	□□□□□ -0.21
MCF2L-231	ENST00000494043	ABCF2	Q9UG63	623 aa		13.77	□□□□□ -0.21
MCF2L-231	ENST00000494043	JAG2	Q9Y219	1238 aa		13.77	□□□□□ -0.21
MCF2L-231	ENST00000494043	COL4A5	P29400	1685 aa		13.76	□□□□□ -0.21
MCF2L-231	ENST00000494043	SGSM2	O43147	1006 aa		13.76	□□□□□ -0.21
MCF2L-231	ENST00000494043	SEC24B	O95487	1268 aa		13.76	□□□□□ -0.21
MCF2L-231	ENST00000494043	CHGB	P05060	677 aa		13.76	□□□□□ -0.21
MCF2L-231	ENST00000494043	PDE6A	P16499	860 aa		13.76	□□□□□ -0.21
MCF2L-231	ENST00000494043	ADD2	P35612	726 aa		13.76	□□□□□ -0.21
MCF2L-231	ENST00000494043	IARS	P41252	1262 aa	Known RBP	13.76	□□□□□ -0.21
MCF2L-231	ENST00000494043	ZMYM1	Q5SVZ6	1142 aa		13.76	□□□□□ -0.21
MCF2L-231	ENST00000494043	SLC9C2	Q5TAH2	1124 aa		13.76	□□□□□ -0.21
MCF2L-231	ENST00000494043	LARGE2	Q8N3Y3	721 aa		13.76	□□□□□ -0.21
MCF2L-231	ENST00000494043	TBC1D22A	Q8WUA7	517 aa		13.76	□□□□□ -0.21
MCF2L-231	ENST00000494043	IL25	Q9H293	177 aa		13.76	□□□□□ -0.21
MCF2L-231	ENST00000494043	MYH7	P12883	1935 aa		13.76	□□□□□ -0.21
MCF2L-231	ENST00000494043	MAST2	Q6P0Q8	1798 aa		13.76	□□□□□ -0.21
MCF2L-231	ENST00000494043	TCRBV5S4A2T	A0A5A2	114 aa		13.75	□□□□□ -0.21
MCF2L-231	ENST00000494043	IGSF3	O75054	1194 aa		13.75	□□□□□ -0.21
MCF2L-231	ENST00000494043	MFAP1	P55081	439 aa	Known RBP	13.75	□□□□□ -0.21
MCF2L-231	ENST00000494043	GTF2I	P78347	998 aa		13.75	□□□□□ -0.21
MCF2L-231	ENST00000494043	RASSF7	Q02833	373 aa		13.75	□□□□□ -0.21
MCF2L-231	ENST00000494043	UBE3C	Q15386	1083 aa		13.75	□□□□□ -0.21
MCF2L-231	ENST00000494043	SPTY2D1	Q68D10	685 aa	Predicted RBP	13.75	□□□□□ -0.21
MCF2L-231	ENST00000494043	ERICH6	Q7L0X2	663 aa		13.75	□□□□□ -0.21
MCF2L-231	ENST00000494043	APPBP2	Q92624	585 aa		13.75	□□□□□ -0.21
MCF2L-231	ENST00000494043	HELLS	Q9NRZ9	838 aa		13.75	□□□□□ -0.21
MCF2L-231	ENST00000494043	RAI14	Q9P0K7	980 aa		13.75	□□□□□ -0.21
MCF2L-231	ENST00000494043	CHD4	Q14839	1912 aa		13.74	□□□□□ -0.21
MCF2L-231	ENST00000494043	MYO5A	Q9Y4I1	1855 aa	Known RBP	13.74	□□□□□ -0.21
MCF2L-231	ENST00000494043	ZNF532	Q9HCE3	1301 aa		13.74	□□□□□ -0.21
MCF2L-231	ENST00000494043	REC8	O95072	547 aa		13.74	□□□□□ -0.21
MCF2L-231	ENST00000494043	LDHB	P07195	334 aa	Known RBP	13.74	□□□□□ -0.21
MCF2L-231	ENST00000494043	PRDX5	P30044	214 aa		13.74	□□□□□ -0.21
MCF2L-231	ENST00000494043	SLFNL1	Q499Z3	407 aa		13.74	□□□□□ -0.21
MCF2L-231	ENST00000494043	MFSD14B	Q5SR56	506 aa		13.74	□□□□□ -0.21
MCF2L-231	ENST00000494043	TTLL5	Q6EMB2	1281 aa		13.74	□□□□□ -0.21
MCF2L-231	ENST00000494043	TMED8	Q6PL24	325 aa	Predicted RBP	13.74	□□□□□ -0.21
MCF2L-231	ENST00000494043	NIM1K	Q8IY84	436 aa		13.74	□□□□□ -0.21
MCF2L-231	ENST00000494043	MAGEB6	Q8N7X4	407 aa		13.74	□□□□□ -0.21
MCF2L-231	ENST00000494043	FBXW7	Q969H0	707 aa		13.74	□□□□□ -0.21
MCF2L-231	ENST00000494043	MAST3	O60307	1309 aa		13.73	□□□□□ -0.21
MCF2L-231	ENST00000494043	USP17L3	A6NCW0	530 aa		13.73	□□□□□ -0.21
MCF2L-231	ENST00000494043	USP17L4	A6NCW7	530 aa		13.73	□□□□□ -0.21
MCF2L-231	ENST00000494043	YDJC	A8MPS7	323 aa		13.73	□□□□□ -0.21
MCF2L-231	ENST00000494043	FKBP1A	P62942	108 aa	Known RBP	13.73	□□□□□ -0.21
MCF2L-231	ENST00000494043	MCMDC2	Q4G0Z9	681 aa		13.73	□□□□□ -0.21
MCF2L-231	ENST00000494043	STRIP1	Q5VSL9	837 aa		13.73	□□□□□ -0.21
MCF2L-231	ENST00000494043	USP17L1	Q7RTZ2	530 aa		13.73	□□□□□ -0.21
MCF2L-231	ENST00000494043	DZIP1	Q86YF9	867 aa	Known RBP	13.73	□□□□□ -0.21
MCF2L-231	ENST00000494043	OSBP2	Q969R2	916 aa		13.73	□□□□□ -0.21
MCF2L-231	ENST00000494043	NSUN4	Q96CB9	384 aa	Known RBP	13.73	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 34 ms