RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 USP17L4A6NCW7 530 aa14.08□□□□□ -0.16
LSM2-214ENST00000493387 FZD9O00144 591 aa14.08□□□□□ -0.16
LSM2-214ENST00000493387 IGSF3O75054 1194 aa14.08□□□□□ -0.16
LSM2-214ENST00000493387 PDE4AP27815 886 aa14.08□□□□□ -0.16
LSM2-214ENST00000493387 PRELPP51888 382 aa14.08□□□□□ -0.16
LSM2-214ENST00000493387 FKBP1AP62942 108 aaKnown RBP14.08□□□□□ -0.16
LSM2-214ENST00000493387 RASGRF1Q13972 1273 aa14.08□□□□□ -0.16
LSM2-214ENST00000493387 STRIP1Q5VSL9 837 aa14.08□□□□□ -0.16
LSM2-214ENST00000493387 TTLL5Q6EMB2 1281 aa14.08□□□□□ -0.16
LSM2-214ENST00000493387 USP17L1Q7RTZ2 530 aa14.08□□□□□ -0.16
LSM2-214ENST00000493387 SPATA5Q8NB90 893 aa14.08□□□□□ -0.16
LSM2-214ENST00000493387 HAUS7Q99871 368 aa14.08□□□□□ -0.16
LSM2-214ENST00000493387 MCAMP43121 646 aa14.07□□□□□ -0.16
LSM2-214ENST00000493387 TTF1Q15361 905 aaPredicted RBP14.07□□□□□ -0.16
LSM2-214ENST00000493387 CIAPIN1Q6FI81 312 aa14.07□□□□□ -0.16
LSM2-214ENST00000493387 BOLA2Q9H3K6 86 aa14.07□□□□□ -0.16
LSM2-214ENST00000493387 HMG20BQ9P0W2 317 aa14.07□□□□□ -0.16
LSM2-214ENST00000493387 IQSEC3Q9UPP2 1182 aaPredicted RBP14.07□□□□□ -0.16
LSM2-214ENST00000493387 YDJCA8MPS7 323 aa14.06□□□□□ -0.16
LSM2-214ENST00000493387 GTF2IP78347 998 aa14.06□□□□□ -0.16
LSM2-214ENST00000493387 CHAF1AQ13111 956 aaPredicted RBP14.06□□□□□ -0.16
LSM2-214ENST00000493387 SPTY2D1Q68D10 685 aaPredicted RBP14.06□□□□□ -0.16
LSM2-214ENST00000493387 PI4K2BQ8TCG2 481 aa14.06□□□□□ -0.16
LSM2-214ENST00000493387 SUGT1Q9Y2Z0 365 aa14.06□□□□□ -0.16
LSM2-214ENST00000493387 MYO3BQ8WXR4 1341 aa14.06□□□□□ -0.16
LSM2-214ENST00000493387 SALL1Q9NSC2 1324 aa14.06□□□□□ -0.16
LSM2-214ENST00000493387 CHD4Q14839 1912 aa14.05□□□□□ -0.16
LSM2-214ENST00000493387 VIL1P09327 827 aaKnown RBP14.05□□□□□ -0.16
LSM2-214ENST00000493387 MMP14P50281 582 aa14.05□□□□□ -0.16
LSM2-214ENST00000493387 CXCL9Q07325 125 aa14.05□□□□□ -0.16
LSM2-214ENST00000493387 DPY19L2Q6NUT2 758 aa14.05□□□□□ -0.16
LSM2-214ENST00000493387 FBXW7Q969H0 707 aa14.05□□□□□ -0.16
LSM2-214ENST00000493387 SBF1O95248 1867 aa14.05□□□□□ -0.16
LSM2-214ENST00000493387 DICER1Q9UPY3 1922 aaKnown RBP14.04□□□□□ -0.16
LSM2-214ENST00000493387 RAD17O75943 681 aa14.04□□□□□ -0.16
LSM2-214ENST00000493387 RPS12P25398 132 aaKnown RBP14.04□□□□□ -0.16
LSM2-214ENST00000493387 ZAP70P43403 619 aa14.04□□□□□ -0.16
LSM2-214ENST00000493387 SCARF1Q14162 830 aa14.04□□□□□ -0.16
LSM2-214ENST00000493387 LRRFIP1Q32MZ4 808 aaKnown RBP14.04□□□□□ -0.16
LSM2-214ENST00000493387 MFSD14BQ5SR56 506 aa14.04□□□□□ -0.16
LSM2-214ENST00000493387 DACT2Q5SW24 774 aa14.04□□□□□ -0.16
LSM2-214ENST00000493387 TSHZ3Q63HK5 1081 aa14.04□□□□□ -0.16
LSM2-214ENST00000493387 TMED8Q6PL24 325 aaPredicted RBP14.04□□□□□ -0.16
LSM2-214ENST00000493387 TICAM2Q86XR7 235 aa14.04□□□□□ -0.16
LSM2-214ENST00000493387 AGBL3Q8NEM8 1001 aa14.04□□□□□ -0.16
LSM2-214ENST00000493387 DNAJC2Q99543 621 aaKnown RBP14.04□□□□□ -0.16
LSM2-214ENST00000493387 SNRKQ9NRH2 765 aa14.04□□□□□ -0.16
LSM2-214ENST00000493387 PAG1Q9NWQ8 432 aa14.04□□□□□ -0.16
LSM2-214ENST00000493387 CCDC88AQ3V6T2 1871 aa14.04□□□□□ -0.16
LSM2-214ENST00000493387 PSMD14O00487 310 aa14.03□□□□□ -0.16
LSM2-214ENST00000493387 RGS3P49796 1198 aa14.03□□□□□ -0.16
LSM2-214ENST00000493387 TTC22Q5TAA0 569 aa14.03□□□□□ -0.16
LSM2-214ENST00000493387 RSBN1LQ6PCB5 846 aaPredicted RBP14.03□□□□□ -0.16
LSM2-214ENST00000493387 ERICH6Q7L0X2 663 aa14.03□□□□□ -0.16
LSM2-214ENST00000493387 GPC2Q8N158 579 aa14.03□□□□□ -0.16
LSM2-214ENST00000493387 EVI5LQ96CN4 794 aa14.03□□□□□ -0.16
LSM2-214ENST00000493387 KCNQ5Q9NR82 932 aa14.03□□□□□ -0.16
LSM2-214ENST00000493387 COL4A5P29400 1685 aa14.03□□□□□ -0.16
LSM2-214ENST00000493387 MAST3O60307 1309 aa14.02□□□□□ -0.17
LSM2-214ENST00000493387 GOLIM4O00461 696 aa14.02□□□□□ -0.17
LSM2-214ENST00000493387 CYP2E1P05181 493 aaPredicted RBP14.02□□□□□ -0.17
LSM2-214ENST00000493387 LDHBP07195 334 aaKnown RBP14.02□□□□□ -0.17
LSM2-214ENST00000493387 MAP3K12Q12852 859 aa14.02□□□□□ -0.17
LSM2-214ENST00000493387 PI16Q6UXB8 463 aa14.02□□□□□ -0.17
LSM2-214ENST00000493387 SLF2Q8IX21 1173 aa14.02□□□□□ -0.17
LSM2-214ENST00000493387 CNTROBQ8N137 903 aa14.02□□□□□ -0.17
LSM2-214ENST00000493387 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.02□□□□□ -0.17
LSM2-214ENST00000493387 LRP2BPQ9P2M1 347 aa14.02□□□□□ -0.17
LSM2-214ENST00000493387 ABCF2Q9UG63 623 aa14.02□□□□□ -0.17
LSM2-214ENST00000493387 COL1A1P02452 1464 aaPredicted RBP14.01□□□□□ -0.17
LSM2-214ENST00000493387 ZSCAN25Q6NSZ9 544 aa14.01□□□□□ -0.17
LSM2-214ENST00000493387 KBTBD3Q8NAB2 608 aa14.01□□□□□ -0.17
LSM2-214ENST00000493387 DPF2Q92785 391 aa14.01□□□□□ -0.17
LSM2-214ENST00000493387 MRIQ9BWK5 157 aa14.01□□□□□ -0.17
LSM2-214ENST00000493387 HDAC9Q9UKV0 1011 aa14.01□□□□□ -0.17
LSM2-214ENST00000493387 JAG2Q9Y219 1238 aa14.01□□□□□ -0.17
LSM2-214ENST00000493387 GJA3Q9Y6H8 435 aa14.01□□□□□ -0.17
LSM2-214ENST00000493387 AKAP11Q9UKA4 1901 aa14□□□□□ -0.17
LSM2-214ENST00000493387 ZNF541Q9H0D2 1346 aa14□□□□□ -0.17
LSM2-214ENST00000493387 GLTPD2A6NH11 291 aa14□□□□□ -0.17
LSM2-214ENST00000493387 TRIM6-TRIM34B2RNG4 842 aa14□□□□□ -0.17
LSM2-214ENST00000493387 GSTO1P78417 241 aa14□□□□□ -0.17
LSM2-214ENST00000493387 HDLBPQ00341 1268 aaKnown RBP14□□□□□ -0.17
LSM2-214ENST00000493387 BMP2KLQ5H9B9 411 aa14□□□□□ -0.17
LSM2-214ENST00000493387 TBC1D9Q6ZT07 1266 aa14□□□□□ -0.17
LSM2-214ENST00000493387 OGFOD1Q8N543 542 aa14□□□□□ -0.17
LSM2-214ENST00000493387 GMLQ99445 158 aa14□□□□□ -0.17
LSM2-214ENST00000493387 PIH1D3Q9NQM4 214 aaKnown RBP14□□□□□ -0.17
LSM2-214ENST00000493387 RAI14Q9P0K7 980 aa14□□□□□ -0.17
LSM2-214ENST00000493387 IDH1O75874 414 aaKnown RBP13.99□□□□□ -0.17
LSM2-214ENST00000493387 LDHCP07864 332 aa13.99□□□□□ -0.17
LSM2-214ENST00000493387 ZFYP08048 801 aaPredicted RBP13.99□□□□□ -0.17
LSM2-214ENST00000493387 DZIP1Q86YF9 867 aaKnown RBP13.99□□□□□ -0.17
LSM2-214ENST00000493387 CERS5Q8N5B7 392 aa13.99□□□□□ -0.17
LSM2-214ENST00000493387 RILPL2Q969X0 211 aa13.99□□□□□ -0.17
LSM2-214ENST00000493387 FSD1Q9BTV5 496 aa13.99□□□□□ -0.17
LSM2-214ENST00000493387 ANTXR1Q9H6X2 564 aa13.99□□□□□ -0.17
LSM2-214ENST00000493387 NDUFB9Q9Y6M9 179 aa13.99□□□□□ -0.17
LSM2-214ENST00000493387 SCN9AQ15858 1988 aa13.99□□□□□ -0.17
LSM2-214ENST00000493387 MYH13Q9UKX3 1938 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms