RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-219ENST00000492602 TRMT112Q9UI30 125 aaKnown RBP7.21□□□□□ -1.26
SEC13-219ENST00000492602 FAM205AQ6ZU69 1335 aa7.21□□□□□ -1.26
SEC13-219ENST00000492602 PRKCZQ05513 592 aa7.2□□□□□ -1.26
SEC13-219ENST00000492602 NBPF12Q5TAG4 269 aaPredicted RBP7.2□□□□□ -1.26
SEC13-219ENST00000492602 PODNQ7Z5L7 613 aa7.2□□□□□ -1.26
SEC13-219ENST00000492602 HELBQ8NG08 1087 aaPredicted RBP7.2□□□□□ -1.26
SEC13-219ENST00000492602 ADAMTS19Q8TE59 1207 aa7.2□□□□□ -1.26
SEC13-219ENST00000492602 ZNF428Q96B54 188 aa7.2□□□□□ -1.26
SEC13-219ENST00000492602 UHRF1Q96T88 793 aaPredicted RBP7.2□□□□□ -1.26
SEC13-219ENST00000492602 CPA4Q9UI42 421 aa7.2□□□□□ -1.26
SEC13-219ENST00000492602 GGA1Q9UJY5 639 aa7.2□□□□□ -1.26
SEC13-219ENST00000492602 LRRC37AA6NMS7 1700 aa7.2□□□□□ -1.26
SEC13-219ENST00000492602 SH3TC1Q8TE82 1336 aa7.2□□□□□ -1.26
SEC13-219ENST00000492602 LAMB1P07942 1786 aa7.2□□□□□ -1.26
SEC13-219ENST00000492602 SSC5DA1L4H1 1573 aa7.2□□□□□ -1.26
SEC13-219ENST00000492602 ALPK3Q96L96 1907 aa7.19□□□□□ -1.26
SEC13-219ENST00000492602 ANKRD36CQ5JPF3 1778 aa7.19□□□□□ -1.26
SEC13-219ENST00000492602 DIAPH1O60610 1272 aaKnown RBP7.19□□□□□ -1.26
SEC13-219ENST00000492602 INHAP05111 366 aa7.19□□□□□ -1.26
SEC13-219ENST00000492602 DACT2Q5SW24 774 aa7.19□□□□□ -1.26
SEC13-219ENST00000492602 C17orf99Q6UX52 265 aa7.19□□□□□ -1.26
SEC13-219ENST00000492602 NLRP10Q86W26 655 aa7.19□□□□□ -1.26
SEC13-219ENST00000492602 USP38Q8NB14 1042 aa7.19□□□□□ -1.26
SEC13-219ENST00000492602 NBPF3Q9H094 633 aa7.19□□□□□ -1.26
SEC13-219ENST00000492602 CRISPLD2Q9H0B8 497 aa7.19□□□□□ -1.26
SEC13-219ENST00000492602 PODXL2Q9NZ53 605 aa7.19□□□□□ -1.26
SEC13-219ENST00000492602 PPP2R3BQ9Y5P8 575 aa7.19□□□□□ -1.26
SEC13-219ENST00000492602 COL1A1P02452 1464 aaPredicted RBP7.18□□□□□ -1.26
SEC13-219ENST00000492602 LAMB2P55268 1798 aa7.18□□□□□ -1.26
SEC13-219ENST00000492602 BTBD19C9JJ37 291 aa7.18□□□□□ -1.26
SEC13-219ENST00000492602 ADCY3O60266 1144 aa7.18□□□□□ -1.26
SEC13-219ENST00000492602 ELNP15502 786 aa7.18□□□□□ -1.26
SEC13-219ENST00000492602 RPS8P62241 208 aaKnown RBP7.18□□□□□ -1.26
SEC13-219ENST00000492602 MCM10Q7L590 875 aa7.18□□□□□ -1.26
SEC13-219ENST00000492602 KIAA0825Q8IV33 1275 aa7.18□□□□□ -1.26
SEC13-219ENST00000492602 RTF1Q92541 710 aaKnown RBP7.18□□□□□ -1.26
SEC13-219ENST00000492602 P2RX7Q99572 595 aaKnown RBP7.18□□□□□ -1.26
SEC13-219ENST00000492602 LRFN3Q9BTN0 628 aa7.18□□□□□ -1.26
SEC13-219ENST00000492602 TTYH1Q9H313 450 aaPredicted RBP7.18□□□□□ -1.26
SEC13-219ENST00000492602 C11orf49Q9H6J7 331 aa7.18□□□□□ -1.26
SEC13-219ENST00000492602 PAK6Q9NQU5 681 aaPredicted RBP7.18□□□□□ -1.26
SEC13-219ENST00000492602 MIS18AQ9NYP9 233 aa7.18□□□□□ -1.26
SEC13-219ENST00000492602 GABRQQ9UN88 632 aa7.18□□□□□ -1.26
SEC13-219ENST00000492602 MYO3BQ8WXR4 1341 aa7.18□□□□□ -1.26
SEC13-219ENST00000492602 COL2A1P02458 1487 aaPredicted RBP7.17□□□□□ -1.26
SEC13-219ENST00000492602 U2SURPO15042 1029 aaKnown RBP7.17□□□□□ -1.26
SEC13-219ENST00000492602 SF3B3Q15393 1217 aaKnown RBP7.17□□□□□ -1.26
SEC13-219ENST00000492602 HSP90AB3PQ58FF7 597 aa7.17□□□□□ -1.26
SEC13-219ENST00000492602 ANKLE1Q8NAG6 615 aa7.17□□□□□ -1.26
SEC13-219ENST00000492602 IL27Q8NEV9 243 aa7.17□□□□□ -1.26
SEC13-219ENST00000492602 ATXN2LQ8WWM7 1075 aaKnown RBP7.17□□□□□ -1.26
SEC13-219ENST00000492602 ASB2Q96Q27 587 aa7.17□□□□□ -1.26
SEC13-219ENST00000492602 THUMPD2Q9BTF0 503 aaKnown RBP7.17□□□□□ -1.26
SEC13-219ENST00000492602 PANK3Q9H999 370 aa7.17□□□□□ -1.26
SEC13-219ENST00000492602 VEZTQ9HBM0 779 aa7.17□□□□□ -1.26
SEC13-219ENST00000492602 ADGRA2Q96PE1 1338 aa7.17□□□□□ -1.26
SEC13-219ENST00000492602 CLRN2A0PK11 232 aa7.16□□□□□ -1.26
SEC13-219ENST00000492602 CETPP11597 493 aa7.16□□□□□ -1.26
SEC13-219ENST00000492602 MRE11P49959 708 aa7.16□□□□□ -1.26
SEC13-219ENST00000492602 MMP14P50281 582 aa7.16□□□□□ -1.26
SEC13-219ENST00000492602 FCGRTP55899 365 aa7.16□□□□□ -1.26
SEC13-219ENST00000492602 DCTN1Q14203 1278 aa7.16□□□□□ -1.26
SEC13-219ENST00000492602 DLGAP5Q15398 846 aa7.16□□□□□ -1.26
SEC13-219ENST00000492602 STRIP1Q5VSL9 837 aa7.16□□□□□ -1.26
SEC13-219ENST00000492602 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.16□□□□□ -1.26
SEC13-219ENST00000492602 PPM1EQ8WY54 764 aa7.16□□□□□ -1.26
SEC13-219ENST00000492602 ZBED3Q96IU2 234 aaPredicted RBP7.16□□□□□ -1.26
SEC13-219ENST00000492602 LBHD1Q9BQE6 289 aaPredicted RBP7.16□□□□□ -1.26
SEC13-219ENST00000492602 ZCCHC17Q9NP64 241 aaKnown RBP7.16□□□□□ -1.26
SEC13-219ENST00000492602 TAOK2Q9UL54 1235 aa7.16□□□□□ -1.26
SEC13-219ENST00000492602 ZNF804BA4D1E1 1349 aa7.16□□□□□ -1.26
SEC13-219ENST00000492602 MYO1BO43795 1136 aa7.15□□□□□ -1.26
SEC13-219ENST00000492602 FLT3LGP49771 235 aa7.15□□□□□ -1.26
SEC13-219ENST00000492602 MAP3K9P80192 1104 aa7.15□□□□□ -1.26
SEC13-219ENST00000492602 VGLL4Q14135 290 aa7.15□□□□□ -1.26
SEC13-219ENST00000492602 RASA3Q14644 834 aa7.15□□□□□ -1.26
SEC13-219ENST00000492602 PXYLP1Q8TE99 480 aa7.15□□□□□ -1.26
SEC13-219ENST00000492602 PHACTR3Q96KR7 559 aa7.15□□□□□ -1.26
SEC13-219ENST00000492602 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.15□□□□□ -1.26
SEC13-219ENST00000492602 THEGQ9P2T0 379 aa7.15□□□□□ -1.26
SEC13-219ENST00000492602 CSADQ9Y600 493 aa7.15□□□□□ -1.26
SEC13-219ENST00000492602 COL4A1P02462 1669 aa7.15□□□□□ -1.27
SEC13-219ENST00000492602 PSME4Q14997 1843 aa7.15□□□□□ -1.27
SEC13-219ENST00000492602 NCOR1O75376 2440 aa7.15□□□□□ -1.27
SEC13-219ENST00000492602 MUC6Q6W4X9 2439 aa7.15□□□□□ -1.27
SEC13-219ENST00000492602 ZBTB22O15209 634 aa7.14□□□□□ -1.27
SEC13-219ENST00000492602 ATP2B4P23634 1241 aa7.14□□□□□ -1.27
SEC13-219ENST00000492602 XDHP47989 1333 aa7.14□□□□□ -1.27
SEC13-219ENST00000492602 MRPS5P82675 430 aaKnown RBP7.14□□□□□ -1.27
SEC13-219ENST00000492602 SNAPC2Q13487 334 aa7.14□□□□□ -1.27
SEC13-219ENST00000492602 TAF7Q15545 349 aaPredicted RBP7.14□□□□□ -1.27
SEC13-219ENST00000492602 RTL5Q5HYW3 569 aaPredicted RBP7.14□□□□□ -1.27
SEC13-219ENST00000492602 TMEM31Q5JXX7 168 aa7.14□□□□□ -1.27
SEC13-219ENST00000492602 TTLL5Q6EMB2 1281 aa7.14□□□□□ -1.27
SEC13-219ENST00000492602 FAM89AQ96GI7 184 aa7.14□□□□□ -1.27
SEC13-219ENST00000492602 NECAB3Q96P71 396 aaPredicted RBP7.14□□□□□ -1.27
SEC13-219ENST00000492602 EPHX3Q9H6B9 360 aa7.14□□□□□ -1.27
SEC13-219ENST00000492602 SEC31BQ9NQW1 1179 aa7.14□□□□□ -1.27
SEC13-219ENST00000492602 PCDHAC2Q9Y5I4 1007 aa7.14□□□□□ -1.27
SEC13-219ENST00000492602 PFASO15067 1338 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms