RNA–Protein interactions for RNA: ENST00000491761.1

SNED1-211, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best)

Gene SNED1, Length 4,125 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-211ENST00000491761 ANO10Q9NW15 660 aa12.48□□□□□ -0.41
SNED1-211ENST00000491761 ZNF219Q9P2Y4 722 aaPredicted RBP12.48□□□□□ -0.41
SNED1-211ENST00000491761 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.48□□□□□ -0.41
SNED1-211ENST00000491761 MRVI1Q9Y6F6 885 aa12.48□□□□□ -0.41
SNED1-211ENST00000491761 V9GYY5 206 aaPredicted RBP12.48□□□□□ -0.41
SNED1-211ENST00000491761 ZNF213O14771 459 aa12.48□□□□□ -0.41
SNED1-211ENST00000491761 CIAO1O76071 339 aa12.48□□□□□ -0.41
SNED1-211ENST00000491761 FOXO4P98177 505 aa12.48□□□□□ -0.41
SNED1-211ENST00000491761 RESTQ13127 1097 aa12.48□□□□□ -0.41
SNED1-211ENST00000491761 ZNF609O15014 1411 aa12.48□□□□□ -0.41
SNED1-211ENST00000491761 SPATA31A3Q5VYP0 1347 aa12.48□□□□□ -0.41
SNED1-211ENST00000491761 GOLGA8BA8MQT2 603 aa12.48□□□□□ -0.41
SNED1-211ENST00000491761 NBPF26B4DH59 902 aa12.48□□□□□ -0.41
SNED1-211ENST00000491761 H0YHG0 523 aa12.48□□□□□ -0.41
SNED1-211ENST00000491761 IBSPP21815 317 aaPredicted RBP12.48□□□□□ -0.41
SNED1-211ENST00000491761 AXDND1Q5T1B0 1012 aaPredicted RBP12.48□□□□□ -0.41
SNED1-211ENST00000491761 NBPF14Q5TI25 921 aa12.48□□□□□ -0.41
SNED1-211ENST00000491761 NBPF10Q6P3W6 841 aaKnown RBP12.48□□□□□ -0.41
SNED1-211ENST00000491761 C17orf53Q8N3J3 647 aaPredicted RBP12.48□□□□□ -0.41
SNED1-211ENST00000491761 NBPF15Q8N660 670 aa12.48□□□□□ -0.41
SNED1-211ENST00000491761 NCOA5Q9HCD5 579 aaKnown RBP12.48□□□□□ -0.41
SNED1-211ENST00000491761 NR1I2O75469 434 aa12.47□□□□□ -0.41
SNED1-211ENST00000491761 OLFM4Q6UX06 510 aa12.47□□□□□ -0.41
SNED1-211ENST00000491761 CCDC186Q7Z3E2 898 aa12.47□□□□□ -0.41
SNED1-211ENST00000491761 NCOA7Q8NI08 942 aa12.47□□□□□ -0.41
SNED1-211ENST00000491761 NOL10Q9BSC4 688 aaKnown RBP12.47□□□□□ -0.41
SNED1-211ENST00000491761 CLIP2Q9UDT6 1046 aa12.47□□□□□ -0.41
SNED1-211ENST00000491761 LDHAL6AQ6ZMR3 332 aa12.47□□□□□ -0.41
SNED1-211ENST00000491761 ATG3Q9NT62 314 aa12.47□□□□□ -0.41
SNED1-211ENST00000491761 TNS3Q68CZ2 1445 aa12.47□□□□□ -0.41
SNED1-211ENST00000491761 SETQ01105 290 aaPredicted RBP12.47□□□□□ -0.41
SNED1-211ENST00000491761 ATP2B3Q16720 1220 aa12.47□□□□□ -0.41
SNED1-211ENST00000491761 NSUN7Q8NE18 718 aaKnown RBP12.47□□□□□ -0.41
SNED1-211ENST00000491761 XAGE2Q96GT9 111 aa12.47□□□□□ -0.41
SNED1-211ENST00000491761 ORC3Q9UBD5 711 aaPredicted RBP12.47□□□□□ -0.41
SNED1-211ENST00000491761 KLF18A0A0U1RQI7 1052 aa12.47□□□□□ -0.41
SNED1-211ENST00000491761 EXOC5O00471 708 aa12.47□□□□□ -0.41
SNED1-211ENST00000491761 CHGBP05060 677 aa12.47□□□□□ -0.41
SNED1-211ENST00000491761 PTGS1P23219 599 aa12.47□□□□□ -0.41
SNED1-211ENST00000491761 TCIRG1Q13488 830 aa12.47□□□□□ -0.41
SNED1-211ENST00000491761 HSP90AB3PQ58FF7 597 aa12.47□□□□□ -0.41
SNED1-211ENST00000491761 ATG9AQ7Z3C6 839 aa12.47□□□□□ -0.41
SNED1-211ENST00000491761 ANKRD20A12PQ8NF67 263 aa12.47□□□□□ -0.41
SNED1-211ENST00000491761 ZNF274Q96GC6 653 aaPredicted RBP12.47□□□□□ -0.41
SNED1-211ENST00000491761 PUS3Q9BZE2 481 aaKnown RBP12.47□□□□□ -0.41
SNED1-211ENST00000491761 HOOK1Q9UJC3 728 aaKnown RBP12.47□□□□□ -0.41
SNED1-211ENST00000491761 WDR17Q8IZU2 1322 aa12.47□□□□□ -0.41
SNED1-211ENST00000491761 PRC1O43663 620 aa12.46□□□□□ -0.41
SNED1-211ENST00000491761 GPTP24298 496 aa12.46□□□□□ -0.41
SNED1-211ENST00000491761 FUCA2Q9BTY2 467 aa12.46□□□□□ -0.41
SNED1-211ENST00000491761 ANKRD18BA2A2Z9 1011 aa12.46□□□□□ -0.41
SNED1-211ENST00000491761 IDH1O75874 414 aaKnown RBP12.46□□□□□ -0.41
SNED1-211ENST00000491761 ISM2Q6H9L7 571 aa12.46□□□□□ -0.41
SNED1-211ENST00000491761 FAM89AQ96GI7 184 aa12.46□□□□□ -0.41
SNED1-211ENST00000491761 CEP89Q96ST8 783 aa12.46□□□□□ -0.41
SNED1-211ENST00000491761 MAST3O60307 1309 aa12.46□□□□□ -0.41
SNED1-211ENST00000491761 MARF1Q9Y4F3 1742 aaKnown RBP12.46□□□□□ -0.42
SNED1-211ENST00000491761 RGPD2P0DJD1 1756 aa12.46□□□□□ -0.42
SNED1-211ENST00000491761 FAM193AP78312 1265 aa12.46□□□□□ -0.42
SNED1-211ENST00000491761 CCDC70Q6NSX1 233 aa12.46□□□□□ -0.42
SNED1-211ENST00000491761 AMOTL1Q8IY63 956 aa12.46□□□□□ -0.42
SNED1-211ENST00000491761 CAGE1Q8TC20 777 aa12.46□□□□□ -0.42
SNED1-211ENST00000491761 N4BP2Q86UW6 1770 aaPredicted RBP12.46□□□□□ -0.42
SNED1-211ENST00000491761 TNNT1P13805 278 aa12.45□□□□□ -0.42
SNED1-211ENST00000491761 RUFY1Q96T51 708 aa12.45□□□□□ -0.42
SNED1-211ENST00000491761 FBXO3Q9UK99 471 aa12.45□□□□□ -0.42
SNED1-211ENST00000491761 COL15A1P39059 1388 aa12.45□□□□□ -0.42
SNED1-211ENST00000491761 PALLDQ8WX93 1383 aa12.45□□□□□ -0.42
SNED1-211ENST00000491761 BIN1O00499 593 aa12.45□□□□□ -0.42
SNED1-211ENST00000491761 CDKL5O76039 1030 aa12.45□□□□□ -0.42
SNED1-211ENST00000491761 MYRIPQ8NFW9 859 aa12.45□□□□□ -0.42
SNED1-211ENST00000491761 APPBP2Q92624 585 aa12.45□□□□□ -0.42
SNED1-211ENST00000491761 PDIA3P30101 505 aaKnown RBP12.45□□□□□ -0.42
SNED1-211ENST00000491761 ZNF75DP51815 510 aa12.45□□□□□ -0.42
SNED1-211ENST00000491761 SLFNL1Q499Z3 407 aa12.45□□□□□ -0.42
SNED1-211ENST00000491761 STOX1Q6ZVD7 989 aa12.45□□□□□ -0.42
SNED1-211ENST00000491761 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.45□□□□□ -0.42
SNED1-211ENST00000491761 MRPS27Q92552 414 aaKnown RBP12.45□□□□□ -0.42
SNED1-211ENST00000491761 ACSBG1Q96GR2 724 aa12.45□□□□□ -0.42
SNED1-211ENST00000491761 PGBD1Q96JS3 809 aa12.45□□□□□ -0.42
SNED1-211ENST00000491761 POLR3DP05423 398 aaPredicted RBP12.44□□□□□ -0.42
SNED1-211ENST00000491761 CASP7P55210 303 aa12.44□□□□□ -0.42
SNED1-211ENST00000491761 FAM160A1Q05DH4 1040 aa12.44□□□□□ -0.42
SNED1-211ENST00000491761 TTF1Q15361 905 aaPredicted RBP12.44□□□□□ -0.42
SNED1-211ENST00000491761 SMARCC2Q8TAQ2 1214 aa12.44□□□□□ -0.42
SNED1-211ENST00000491761 TSC1Q92574 1164 aa12.44□□□□□ -0.42
SNED1-211ENST00000491761 UBXN4Q92575 508 aa12.44□□□□□ -0.42
SNED1-211ENST00000491761 TRMT112Q9UI30 125 aaKnown RBP12.44□□□□□ -0.42
SNED1-211ENST00000491761 RCOR1Q9UKL0 485 aa12.44□□□□□ -0.42
SNED1-211ENST00000491761 COL9A3Q14050 684 aaPredicted RBP12.44□□□□□ -0.42
SNED1-211ENST00000491761 PTPN14Q15678 1187 aa12.44□□□□□ -0.42
SNED1-211ENST00000491761 LRP10Q7Z4F1 713 aa12.44□□□□□ -0.42
SNED1-211ENST00000491761 RAB11FIP4Q86YS3 637 aa12.44□□□□□ -0.42
SNED1-211ENST00000491761 JMYQ8N9B5 988 aa12.44□□□□□ -0.42
SNED1-211ENST00000491761 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.44□□□□□ -0.42
SNED1-211ENST00000491761 USP28Q96RU2 1077 aa12.44□□□□□ -0.42
SNED1-211ENST00000491761 CCDC82Q8N4S0 544 aa12.43□□□□□ -0.42
SNED1-211ENST00000491761 KCNG4Q8TDN1 519 aa12.43□□□□□ -0.42
SNED1-211ENST00000491761 ZSWIM4Q9H7M6 989 aa12.43□□□□□ -0.42
SNED1-211ENST00000491761 M0R2C6 588 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms