RNA–Protein interactions for RNA: ENST00000491544.1

PCYT1A-216, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 3

Gene PCYT1A, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-216ENST00000491544 XAGE3Q8WTP9 111 aa13.17□□□□□ -0.3
PCYT1A-216ENST00000491544 MYLIPQ8WY64 445 aa13.17□□□□□ -0.3
PCYT1A-216ENST00000491544 ZNF428Q96B54 188 aa13.17□□□□□ -0.3
PCYT1A-216ENST00000491544 WNK4Q96J92 1243 aa13.17□□□□□ -0.3
PCYT1A-216ENST00000491544 PTPN18Q99952 460 aa13.17□□□□□ -0.3
PCYT1A-216ENST00000491544 CHMP4AQ9BY43 222 aa13.17□□□□□ -0.3
PCYT1A-216ENST00000491544 NYXQ9GZU5 481 aa13.17□□□□□ -0.3
PCYT1A-216ENST00000491544 RNF208Q9H0X6 261 aa13.17□□□□□ -0.3
PCYT1A-216ENST00000491544 NCOR1O75376 2440 aa13.17□□□□□ -0.3
PCYT1A-216ENST00000491544 ABCC4O15439 1325 aa13.16□□□□□ -0.3
PCYT1A-216ENST00000491544 ALPK3Q96L96 1907 aa13.16□□□□□ -0.3
PCYT1A-216ENST00000491544 SYN1P17600 705 aa13.16□□□□□ -0.3
PCYT1A-216ENST00000491544 COPS6Q7L5N1 327 aa13.16□□□□□ -0.3
PCYT1A-216ENST00000491544 FRAT1Q92837 279 aaPredicted RBP13.16□□□□□ -0.3
PCYT1A-216ENST00000491544 HYPKQ9NX55 129 aa13.16□□□□□ -0.3
PCYT1A-216ENST00000491544 FLIIQ13045 1269 aa13.15□□□□□ -0.3
PCYT1A-216ENST00000491544 HLFQ16534 295 aa13.15□□□□□ -0.3
PCYT1A-216ENST00000491544 TTLL7Q6ZT98 887 aa13.15□□□□□ -0.3
PCYT1A-216ENST00000491544 LRP10Q7Z4F1 713 aa13.15□□□□□ -0.3
PCYT1A-216ENST00000491544 ZSWIM8A7E2V4 1837 aa13.15□□□□□ -0.3
PCYT1A-216ENST00000491544 FOSL2P15408 326 aa13.14□□□□□ -0.31
PCYT1A-216ENST00000491544 MRE11P49959 708 aa13.14□□□□□ -0.31
PCYT1A-216ENST00000491544 FKBP5Q13451 457 aaPredicted RBP13.14□□□□□ -0.31
PCYT1A-216ENST00000491544 SP8Q8IXZ3 490 aa13.14□□□□□ -0.31
PCYT1A-216ENST00000491544 ADAMTS19Q8TE59 1207 aa13.14□□□□□ -0.31
PCYT1A-216ENST00000491544 SLC10A4Q96EP9 437 aa13.14□□□□□ -0.31
PCYT1A-216ENST00000491544 ZBTB3Q9H5J0 574 aa13.14□□□□□ -0.31
PCYT1A-216ENST00000491544 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.14□□□□□ -0.31
PCYT1A-216ENST00000491544 NOB1Q9ULX3 412 aaKnown RBP13.14□□□□□ -0.31
PCYT1A-216ENST00000491544 KIF16BQ96L93 1317 aa13.13□□□□□ -0.31
PCYT1A-216ENST00000491544 PLIN1O60240 522 aa13.13□□□□□ -0.31
PCYT1A-216ENST00000491544 ECE2O60344 883 aa13.13□□□□□ -0.31
PCYT1A-216ENST00000491544 PRMT2P55345 433 aa13.13□□□□□ -0.31
PCYT1A-216ENST00000491544 KIF6Q6ZMV9 814 aa13.13□□□□□ -0.31
PCYT1A-216ENST00000491544 USP38Q8NB14 1042 aa13.13□□□□□ -0.31
PCYT1A-216ENST00000491544 CLMNQ96JQ2 1002 aa13.13□□□□□ -0.31
PCYT1A-216ENST00000491544 LRFN3Q9BTN0 628 aa13.13□□□□□ -0.31
PCYT1A-216ENST00000491544 ANGEL1Q9UNK9 670 aaKnown RBP13.13□□□□□ -0.31
PCYT1A-216ENST00000491544 FZD1Q9UP38 647 aa13.13□□□□□ -0.31
PCYT1A-216ENST00000491544 TNNQ9UQP3 1299 aa13.13□□□□□ -0.31
PCYT1A-216ENST00000491544 IBTKQ9P2D0 1353 aaPredicted RBP13.12□□□□□ -0.31
PCYT1A-216ENST00000491544 TESPA1A2RU30 521 aaPredicted RBP13.12□□□□□ -0.31
PCYT1A-216ENST00000491544 F6X3S4 739 aa13.12□□□□□ -0.31
PCYT1A-216ENST00000491544 SGPL1O95470 568 aa13.12□□□□□ -0.31
PCYT1A-216ENST00000491544 VIL1P09327 827 aaKnown RBP13.12□□□□□ -0.31
PCYT1A-216ENST00000491544 GRK4P32298 578 aa13.12□□□□□ -0.31
PCYT1A-216ENST00000491544 UHRF1Q96T88 793 aaPredicted RBP13.12□□□□□ -0.31
PCYT1A-216ENST00000491544 SEMA6BQ9H3T3 888 aa13.12□□□□□ -0.31
PCYT1A-216ENST00000491544 MYOZ2Q9NPC6 264 aa13.12□□□□□ -0.31
PCYT1A-216ENST00000491544 TAF1P21675 1872 aa13.12□□□□□ -0.31
PCYT1A-216ENST00000491544 GJA5P36382 358 aa13.11□□□□□ -0.31
PCYT1A-216ENST00000491544 LACTBP83111 547 aaPredicted RBP13.11□□□□□ -0.31
PCYT1A-216ENST00000491544 WASHC4Q2M389 1173 aa13.11□□□□□ -0.31
PCYT1A-216ENST00000491544 RIC3Q7Z5B4 369 aa13.11□□□□□ -0.31
PCYT1A-216ENST00000491544 RIPOR2Q9Y4F9 1068 aa13.11□□□□□ -0.31
PCYT1A-216ENST00000491544 SUPT16HQ9Y5B9 1047 aaKnown RBP13.11□□□□□ -0.31
PCYT1A-216ENST00000491544 MAP3K15Q6ZN16 1313 aa13.11□□□□□ -0.31
PCYT1A-216ENST00000491544 XIRP2A4UGR9 3374 aa13.1□□□□□ -0.31
PCYT1A-216ENST00000491544 PI4KAP2A4QPH2 592 aa13.1□□□□□ -0.31
PCYT1A-216ENST00000491544 DDX58O95786 925 aaKnown RBP13.1□□□□□ -0.31
PCYT1A-216ENST00000491544 GNRH1P01148 92 aa13.1□□□□□ -0.31
PCYT1A-216ENST00000491544 KIF22Q14807 665 aa13.1□□□□□ -0.31
PCYT1A-216ENST00000491544 TAF1CQ15572 869 aaPredicted RBP13.1□□□□□ -0.31
PCYT1A-216ENST00000491544 DOK7Q18PE1 504 aa13.1□□□□□ -0.31
PCYT1A-216ENST00000491544 ZKSCAN2Q63HK3 967 aa13.1□□□□□ -0.31
PCYT1A-216ENST00000491544 SLC4A10Q6U841 1118 aa13.1□□□□□ -0.31
PCYT1A-216ENST00000491544 PI4KAP1Q8N8J0 262 aa13.1□□□□□ -0.31
PCYT1A-216ENST00000491544 PLBD2Q8NHP8 589 aa13.1□□□□□ -0.31
PCYT1A-216ENST00000491544 CLUAP1Q96AJ1 413 aa13.1□□□□□ -0.31
PCYT1A-216ENST00000491544 PAWRQ96IZ0 340 aaKnown RBP13.1□□□□□ -0.31
PCYT1A-216ENST00000491544 UNC93B1Q9H1C4 597 aa13.1□□□□□ -0.31
PCYT1A-216ENST00000491544 MAP3K2Q9Y2U5 619 aa13.1□□□□□ -0.31
PCYT1A-216ENST00000491544 PTPRCP08575 1304 aa13.1□□□□□ -0.31
PCYT1A-216ENST00000491544 FAM205AQ6ZU69 1335 aa13.1□□□□□ -0.31
PCYT1A-216ENST00000491544 RIMBP2O15034 1052 aa13.09□□□□□ -0.31
PCYT1A-216ENST00000491544 BBOX1O75936 387 aa13.09□□□□□ -0.31
PCYT1A-216ENST00000491544 TRIM27P14373 513 aa13.09□□□□□ -0.31
PCYT1A-216ENST00000491544 RRP1P56182 461 aaKnown RBP13.09□□□□□ -0.31
PCYT1A-216ENST00000491544 KSR2Q6VAB6 950 aa13.09□□□□□ -0.31
PCYT1A-216ENST00000491544 DIS3LQ8TF46 1054 aaKnown RBP13.09□□□□□ -0.31
PCYT1A-216ENST00000491544 ZFYVE28Q9HCC9 887 aa13.09□□□□□ -0.31
PCYT1A-216ENST00000491544 DDX60Q8IY21 1712 aaKnown RBP13.08□□□□□ -0.32
PCYT1A-216ENST00000491544 IPO8O15397 1037 aaKnown RBP13.08□□□□□ -0.32
PCYT1A-216ENST00000491544 NBPF9Q3BBW0 867 aa13.08□□□□□ -0.32
PCYT1A-216ENST00000491544 ATF7IPQ6VMQ6 1270 aa13.08□□□□□ -0.32
PCYT1A-216ENST00000491544 DNAAF4Q8WXU2 420 aa13.08□□□□□ -0.32
PCYT1A-216ENST00000491544 MYD88Q99836 296 aa13.08□□□□□ -0.32
PCYT1A-216ENST00000491544 API5Q9BZZ5 524 aaKnown RBP13.08□□□□□ -0.32
PCYT1A-216ENST00000491544 UBN2Q6ZU65 1347 aa13.08□□□□□ -0.32
PCYT1A-216ENST00000491544 ATP5J2-PTCD1G3V325 749 aa13.07□□□□□ -0.32
PCYT1A-216ENST00000491544 TFRCP02786 760 aaKnown RBP13.07□□□□□ -0.32
PCYT1A-216ENST00000491544 UBXN2AP68543 259 aa13.07□□□□□ -0.32
PCYT1A-216ENST00000491544 MAP3K11Q16584 847 aa13.07□□□□□ -0.32
PCYT1A-216ENST00000491544 SUSD4Q5VX71 490 aa13.07□□□□□ -0.32
PCYT1A-216ENST00000491544 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.07□□□□□ -0.32
PCYT1A-216ENST00000491544 AGBL3Q8NEM8 1001 aa13.07□□□□□ -0.32
PCYT1A-216ENST00000491544 RAET1EQ8TD07 263 aa13.07□□□□□ -0.32
PCYT1A-216ENST00000491544 TTYH1Q9H313 450 aaPredicted RBP13.07□□□□□ -0.32
PCYT1A-216ENST00000491544 BIN2Q9UBW5 565 aaPredicted RBP13.07□□□□□ -0.32
PCYT1A-216ENST00000491544 SRRDQ9UH36 339 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms