RNA–Protein interactions for RNA: ENST00000491203.5

CNOT4-210, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-210ENST00000491203 FOXO4P98177 505 aa10.59□□□□□ -0.71
CNOT4-210ENST00000491203 SF3B3Q15393 1217 aaKnown RBP10.59□□□□□ -0.71
CNOT4-210ENST00000491203 CCDC152Q4G0S7 254 aa10.59□□□□□ -0.71
CNOT4-210ENST00000491203 EPHA10Q5JZY3 1008 aa10.59□□□□□ -0.71
CNOT4-210ENST00000491203 C2CD5Q86YS7 1000 aa10.59□□□□□ -0.71
CNOT4-210ENST00000491203 EXOC6Q8TAG9 804 aa10.59□□□□□ -0.71
CNOT4-210ENST00000491203 RPGRQ92834 1020 aaKnown RBP10.59□□□□□ -0.71
CNOT4-210ENST00000491203 KAZALD1Q96I82 304 aa10.59□□□□□ -0.71
CNOT4-210ENST00000491203 BICC1Q9H694 974 aaKnown RBP10.59□□□□□ -0.71
CNOT4-210ENST00000491203 C1orf115Q9H7X2 142 aa10.59□□□□□ -0.71
CNOT4-210ENST00000491203 ZBTB40Q9NUA8 1239 aa10.59□□□□□ -0.71
CNOT4-210ENST00000491203 CHMP3Q9Y3E7 222 aa10.59□□□□□ -0.71
CNOT4-210ENST00000491203 LAMB2P55268 1798 aa10.58□□□□□ -0.72
CNOT4-210ENST00000491203 KLRG2A4D1S0 409 aaPredicted RBP10.58□□□□□ -0.72
CNOT4-210ENST00000491203 H0YIN7 160 aa10.58□□□□□ -0.72
CNOT4-210ENST00000491203 AAMPQ13685 434 aa10.58□□□□□ -0.72
CNOT4-210ENST00000491203 LMBR1LQ6UX01 489 aa10.58□□□□□ -0.72
CNOT4-210ENST00000491203 ANKRD44Q8N8A2 993 aa10.58□□□□□ -0.72
CNOT4-210ENST00000491203 TTLL11Q8NHH1 800 aa10.58□□□□□ -0.72
CNOT4-210ENST00000491203 CCDC85AQ96PX6 553 aaPredicted RBP10.58□□□□□ -0.72
CNOT4-210ENST00000491203 PRR14Q9BWN1 585 aa10.58□□□□□ -0.72
CNOT4-210ENST00000491203 PRKD2Q9BZL6 878 aa10.58□□□□□ -0.72
CNOT4-210ENST00000491203 DDX60Q8IY21 1712 aaKnown RBP10.58□□□□□ -0.72
CNOT4-210ENST00000491203 TNRC6CQ9HCJ0 1690 aaKnown RBP10.57□□□□□ -0.72
CNOT4-210ENST00000491203 CSF1RP07333 972 aa10.57□□□□□ -0.72
CNOT4-210ENST00000491203 SRGNP10124 158 aa10.57□□□□□ -0.72
CNOT4-210ENST00000491203 NPR1P16066 1061 aa10.57□□□□□ -0.72
CNOT4-210ENST00000491203 CHRNA5P30532 468 aa10.57□□□□□ -0.72
CNOT4-210ENST00000491203 TGFB2P61812 414 aa10.57□□□□□ -0.72
CNOT4-210ENST00000491203 RABL6Q3YEC7 729 aaPredicted RBP10.57□□□□□ -0.72
CNOT4-210ENST00000491203 CRY2Q49AN0 593 aa10.57□□□□□ -0.72
CNOT4-210ENST00000491203 DDX46Q7L014 1031 aaKnown RBP10.57□□□□□ -0.72
CNOT4-210ENST00000491203 GPIHBP1Q8IV16 184 aa10.57□□□□□ -0.72
CNOT4-210ENST00000491203 RBM17Q96I25 401 aaKnown RBP10.57□□□□□ -0.72
CNOT4-210ENST00000491203 GREM2Q9H772 168 aa10.57□□□□□ -0.72
CNOT4-210ENST00000491203 ANKRD31Q8N7Z5 1873 aa10.57□□□□□ -0.72
CNOT4-210ENST00000491203 RTL9Q8NET4 1388 aa10.56□□□□□ -0.72
CNOT4-210ENST00000491203 A0A0G2JLW4 131 aa10.56□□□□□ -0.72
CNOT4-210ENST00000491203 ANKRD18BA2A2Z9 1011 aa10.56□□□□□ -0.72
CNOT4-210ENST00000491203 DPEP1P16444 411 aa10.56□□□□□ -0.72
CNOT4-210ENST00000491203 IFIT5Q13325 482 aaKnown RBP10.56□□□□□ -0.72
CNOT4-210ENST00000491203 CCDC57Q2TAC2 916 aa10.56□□□□□ -0.72
CNOT4-210ENST00000491203 STYK1Q6J9G0 422 aa10.56□□□□□ -0.72
CNOT4-210ENST00000491203 ZNF622Q969S3 477 aaKnown RBP eCLIP10.56□□□□□ -0.721e-8■□□□□ 8.5
CNOT4-210ENST00000491203 EMID1Q96A84 441 aaPredicted RBP10.56□□□□□ -0.72
CNOT4-210ENST00000491203 MASTLQ96GX5 879 aa10.56□□□□□ -0.72
CNOT4-210ENST00000491203 FHDC1Q9C0D6 1143 aaPredicted RBP10.56□□□□□ -0.72
CNOT4-210ENST00000491203 LRP5O75197 1615 aa10.55□□□□□ -0.72
CNOT4-210ENST00000491203 SRGAP3O43295 1099 aa10.55□□□□□ -0.72
CNOT4-210ENST00000491203 ITGA6P23229 1130 aa10.55□□□□□ -0.72
CNOT4-210ENST00000491203 HOXA10P31260 410 aaPredicted RBP10.55□□□□□ -0.72
CNOT4-210ENST00000491203 ATP8B2P98198 1209 aa10.55□□□□□ -0.72
CNOT4-210ENST00000491203 MTX1Q13505 466 aa10.55□□□□□ -0.72
CNOT4-210ENST00000491203 KMT5BQ4FZB7 885 aa10.55□□□□□ -0.72
CNOT4-210ENST00000491203 TAF7LQ5H9L4 462 aa10.55□□□□□ -0.72
CNOT4-210ENST00000491203 CEP85Q6P2H3 762 aa10.55□□□□□ -0.72
CNOT4-210ENST00000491203 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.55□□□□□ -0.72
CNOT4-210ENST00000491203 RPAP2Q8IXW5 612 aaPredicted RBP10.55□□□□□ -0.72
CNOT4-210ENST00000491203 CNKSR1Q969H4 720 aa10.55□□□□□ -0.72
CNOT4-210ENST00000491203 CRAMP1Q96RY5 1269 aa10.55□□□□□ -0.72
CNOT4-210ENST00000491203 CDC5LQ99459 802 aaKnown RBP10.55□□□□□ -0.72
CNOT4-210ENST00000491203 KIF13BQ9NQT8 1826 aa10.55□□□□□ -0.72
CNOT4-210ENST00000491203 MYH3P11055 1940 aa10.54□□□□□ -0.72
CNOT4-210ENST00000491203 LCE2BO14633 110 aa10.54□□□□□ -0.72
CNOT4-210ENST00000491203 HMMRO75330 724 aa10.54□□□□□ -0.72
CNOT4-210ENST00000491203 ALDH1B1P30837 517 aa10.54□□□□□ -0.72
CNOT4-210ENST00000491203 IGHMBP2P38935 993 aaKnown RBP10.54□□□□□ -0.72
CNOT4-210ENST00000491203 GRAPQ13588 217 aa10.54□□□□□ -0.72
CNOT4-210ENST00000491203 ANKRD18AQ8IVF6 992 aa10.54□□□□□ -0.72
CNOT4-210ENST00000491203 NLGN2Q8NFZ4 835 aa10.54□□□□□ -0.72
CNOT4-210ENST00000491203 GRAPLQ8TC17 118 aaPredicted RBP10.54□□□□□ -0.72
CNOT4-210ENST00000491203 SEC31BQ9NQW1 1179 aa10.54□□□□□ -0.72
CNOT4-210ENST00000491203 COL11A2P13942 1736 aaPredicted RBP10.53□□□□□ -0.72
CNOT4-210ENST00000491203 PNMA6EA0A0J9YXQ4 647 aa10.53□□□□□ -0.72
CNOT4-210ENST00000491203 RPS8P62241 208 aaKnown RBP10.53□□□□□ -0.72
CNOT4-210ENST00000491203 TTLL6Q8N841 843 aa10.53□□□□□ -0.72
CNOT4-210ENST00000491203 CELF1Q92879 486 aaKnown RBP10.53□□□□□ -0.72
CNOT4-210ENST00000491203 SYT17Q9BSW7 474 aa10.53□□□□□ -0.72
CNOT4-210ENST00000491203 PIM2Q9P1W9 311 aa10.53□□□□□ -0.72
CNOT4-210ENST00000491203 PCDHB15Q9Y5E8 787 aa10.53□□□□□ -0.72
CNOT4-210ENST00000491203 RNF223E7ERA6 249 aa10.52□□□□□ -0.73
CNOT4-210ENST00000491203 PPEF1O14829 653 aaPredicted RBP10.52□□□□□ -0.73
CNOT4-210ENST00000491203 BBOX1O75936 387 aa10.52□□□□□ -0.73
CNOT4-210ENST00000491203 KCNA3P22001 575 aa10.52□□□□□ -0.73
CNOT4-210ENST00000491203 RFX5P48382 616 aaPredicted RBP10.52□□□□□ -0.73
CNOT4-210ENST00000491203 DALRD3Q5D0E6 543 aaKnown RBP10.52□□□□□ -0.73
CNOT4-210ENST00000491203 PRPF40BQ6NWY9 871 aaKnown RBP10.52□□□□□ -0.73
CNOT4-210ENST00000491203 TMC4Q7Z404 712 aa10.52□□□□□ -0.73
CNOT4-210ENST00000491203 SSH3Q8TE77 659 aa10.52□□□□□ -0.73
CNOT4-210ENST00000491203 ZNF594Q96JF6 807 aaPredicted RBP10.52□□□□□ -0.73
CNOT4-210ENST00000491203 MPHOSPH8Q99549 860 aa10.52□□□□□ -0.73
CNOT4-210ENST00000491203 TMX4Q9H1E5 349 aaPredicted RBP10.52□□□□□ -0.73
CNOT4-210ENST00000491203 DAXXQ9UER7 740 aaPredicted RBP10.52□□□□□ -0.73
CNOT4-210ENST00000491203 V9GY48 417 aaPredicted RBP10.52□□□□□ -0.73
CNOT4-210ENST00000491203 KIAA1551Q9HCM1 1747 aa10.51□□□□□ -0.73
CNOT4-210ENST00000491203 PUS10Q3MIT2 529 aaKnown RBP10.51□□□□□ -0.73
CNOT4-210ENST00000491203 SIRT2Q8IXJ6 389 aa10.51□□□□□ -0.73
CNOT4-210ENST00000491203 KLHDC4Q8TBB5 520 aa10.51□□□□□ -0.73
CNOT4-210ENST00000491203 COPRSQ9NQ92 184 aa10.51□□□□□ -0.73
CNOT4-210ENST00000491203 CNNM1Q9NRU3 951 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms