RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 HEATR3Q7Z4Q2 680 aa16.64■□□□□ 0.26
ARHGEF39-205ENST00000490638 SERPINC1P01008 464 aa16.64■□□□□ 0.25
ARHGEF39-205ENST00000490638 UBA7P41226 1012 aa16.64■□□□□ 0.25
ARHGEF39-205ENST00000490638 CHRNDQ07001 517 aa16.64■□□□□ 0.25
ARHGEF39-205ENST00000490638 TSPY26PQ9H489 355 aa16.64■□□□□ 0.25
ARHGEF39-205ENST00000490638 TCP11L1Q9NUJ3 509 aa16.64■□□□□ 0.25
ARHGEF39-205ENST00000490638 USP31Q70CQ4 1352 aa16.64■□□□□ 0.25
ARHGEF39-205ENST00000490638 EAF2Q96CJ1 260 aaPredicted RBP16.64■□□□□ 0.25
ARHGEF39-205ENST00000490638 TMX3Q96JJ7 454 aa16.64■□□□□ 0.25
ARHGEF39-205ENST00000490638 ALG1Q9BT22 464 aa16.64■□□□□ 0.25
ARHGEF39-205ENST00000490638 STX6O43752 255 aa16.64■□□□□ 0.25
ARHGEF39-205ENST00000490638 MCM4P33991 863 aa16.64■□□□□ 0.25
ARHGEF39-205ENST00000490638 DHX32Q7L7V1 743 aaKnown RBP16.64■□□□□ 0.25
ARHGEF39-205ENST00000490638 ZKSCAN3Q9BRR0 538 aa16.64■□□□□ 0.25
ARHGEF39-205ENST00000490638 CCDC39Q9UFE4 941 aa16.64■□□□□ 0.25
ARHGEF39-205ENST00000490638 ZNF853P0CG23 659 aa16.63■□□□□ 0.25
ARHGEF39-205ENST00000490638 NASPP49321 788 aaPredicted RBP16.63■□□□□ 0.25
ARHGEF39-205ENST00000490638 BCAMP50895 628 aa16.63■□□□□ 0.25
ARHGEF39-205ENST00000490638 EAPPQ56P03 285 aaPredicted RBP16.63■□□□□ 0.25
ARHGEF39-205ENST00000490638 EDC3Q96F86 508 aaKnown RBP16.63■□□□□ 0.25
ARHGEF39-205ENST00000490638 VPS72Q15906 364 aa16.63■□□□□ 0.25
ARHGEF39-205ENST00000490638 TXNRD1Q16881 649 aa16.63■□□□□ 0.25
ARHGEF39-205ENST00000490638 ERFEQ4G0M1 354 aa16.63■□□□□ 0.25
ARHGEF39-205ENST00000490638 PICK1Q9NRD5 415 aa16.63■□□□□ 0.25
ARHGEF39-205ENST00000490638 PDE8BO95263 885 aa16.63■□□□□ 0.25
ARHGEF39-205ENST00000490638 RBM25P49756 843 aaKnown RBP16.63■□□□□ 0.25
ARHGEF39-205ENST00000490638 TEKT1Q969V4 418 aa16.63■□□□□ 0.25
ARHGEF39-205ENST00000490638 MPHOSPH6Q99547 160 aaKnown RBP16.63■□□□□ 0.25
ARHGEF39-205ENST00000490638 BBOX1O75936 387 aa16.62■□□□□ 0.25
ARHGEF39-205ENST00000490638 MAPKAPK5Q8IW41 473 aa16.62■□□□□ 0.25
ARHGEF39-205ENST00000490638 SEC31BQ9NQW1 1179 aa16.62■□□□□ 0.25
ARHGEF39-205ENST00000490638 NAPAP54920 295 aa16.62■□□□□ 0.25
ARHGEF39-205ENST00000490638 PPP4R3AQ6IN85 833 aa16.62■□□□□ 0.25
ARHGEF39-205ENST00000490638 CCDC148Q8NFR7 591 aa16.62■□□□□ 0.25
ARHGEF39-205ENST00000490638 FAM227BQ96M60 508 aa16.62■□□□□ 0.25
ARHGEF39-205ENST00000490638 CERS3Q8IU89 383 aa16.62■□□□□ 0.25
ARHGEF39-205ENST00000490638 PANK2Q9BZ23 570 aa16.62■□□□□ 0.25
ARHGEF39-205ENST00000490638 CPSF1Q10570 1443 aaKnown RBP16.62■□□□□ 0.25
ARHGEF39-205ENST00000490638 ZNF532Q9HCE3 1301 aa16.62■□□□□ 0.25
ARHGEF39-205ENST00000490638 CALM1P0DP23 149 aa16.62■□□□□ 0.25
ARHGEF39-205ENST00000490638 CALM2P0DP24 149 aa16.62■□□□□ 0.25
ARHGEF39-205ENST00000490638 CALM3P0DP25 149 aa16.62■□□□□ 0.25
ARHGEF39-205ENST00000490638 SYCP1Q15431 976 aa16.62■□□□□ 0.25
ARHGEF39-205ENST00000490638 CCDC102BQ68D86 513 aa16.62■□□□□ 0.25
ARHGEF39-205ENST00000490638 PUS3Q9BZE2 481 aaKnown RBP16.62■□□□□ 0.25
ARHGEF39-205ENST00000490638 CRB1P82279 1406 aa16.62■□□□□ 0.25
ARHGEF39-205ENST00000490638 ZNF804BA4D1E1 1349 aa16.61■□□□□ 0.25
ARHGEF39-205ENST00000490638 ATP5JP18859 108 aa16.61■□□□□ 0.25
ARHGEF39-205ENST00000490638 SH2D4AQ9H788 454 aa16.61■□□□□ 0.25
ARHGEF39-205ENST00000490638 COPRSQ9NQ92 184 aa16.61■□□□□ 0.25
ARHGEF39-205ENST00000490638 FBXO3Q9UK99 471 aa16.61■□□□□ 0.25
ARHGEF39-205ENST00000490638 B4E1Z4 1266 aa16.61■□□□□ 0.25
ARHGEF39-205ENST00000490638 SSFA2P28290 1259 aa16.61■□□□□ 0.25
ARHGEF39-205ENST00000490638 UBA5Q9GZZ9 404 aa16.61■□□□□ 0.25
ARHGEF39-205ENST00000490638 IDEP14735 1019 aa16.61■□□□□ 0.25
ARHGEF39-205ENST00000490638 EN1Q05925 392 aaPredicted RBP16.61■□□□□ 0.25
ARHGEF39-205ENST00000490638 UBE4AQ14139 1066 aa16.61■□□□□ 0.25
ARHGEF39-205ENST00000490638 CLEC4GQ6UXB4 293 aa16.61■□□□□ 0.25
ARHGEF39-205ENST00000490638 SMARCC2Q8TAQ2 1214 aa16.6■□□□□ 0.25
ARHGEF39-205ENST00000490638 ZBTB7AO95365 584 aa16.6■□□□□ 0.25
ARHGEF39-205ENST00000490638 RXRAP19793 462 aa16.6■□□□□ 0.25
ARHGEF39-205ENST00000490638 ZYXQ15942 572 aaKnown RBP16.6■□□□□ 0.25
ARHGEF39-205ENST00000490638 USP40Q9NVE5 1235 aa16.6■□□□□ 0.25
ARHGEF39-205ENST00000490638 RBM27Q9P2N5 1060 aaKnown RBP16.6■□□□□ 0.25
ARHGEF39-205ENST00000490638 APOBRQ0VD83 1088 aa16.6■□□□□ 0.25
ARHGEF39-205ENST00000490638 TGFBRAP1Q8WUH2 860 aa16.6■□□□□ 0.25
ARHGEF39-205ENST00000490638 HOOK2Q96ED9 719 aa16.6■□□□□ 0.25
ARHGEF39-205ENST00000490638 GDPD2Q9HCC8 539 aa16.6■□□□□ 0.25
ARHGEF39-205ENST00000490638 CROCC2H7BZ55 1655 aa16.6■□□□□ 0.25
ARHGEF39-205ENST00000490638 SCNN1DP51172 638 aa16.59■□□□□ 0.25
ARHGEF39-205ENST00000490638 IL27Q8NEV9 243 aa16.59■□□□□ 0.25
ARHGEF39-205ENST00000490638 XDHP47989 1333 aa16.59■□□□□ 0.25
ARHGEF39-205ENST00000490638 PPEF1O14829 653 aaPredicted RBP16.59■□□□□ 0.25
ARHGEF39-205ENST00000490638 MRE11P49959 708 aa16.59■□□□□ 0.25
ARHGEF39-205ENST00000490638 KLHL10Q6JEL2 608 aa16.59■□□□□ 0.25
ARHGEF39-205ENST00000490638 CAMK4Q16566 473 aa16.59■□□□□ 0.25
ARHGEF39-205ENST00000490638 NARFQ9UHQ1 456 aa16.59■□□□□ 0.25
ARHGEF39-205ENST00000490638 RIMS1Q86UR5 1692 aaKnown RBP16.58■□□□□ 0.25
ARHGEF39-205ENST00000490638 OVOS2A0A0G2JMS6 1433 aa16.58■□□□□ 0.25
ARHGEF39-205ENST00000490638 OVOS2A0A0J9YW53 1432 aa16.58■□□□□ 0.25
ARHGEF39-205ENST00000490638 OVOS2Q6IE36 1432 aa16.58■□□□□ 0.25
ARHGEF39-205ENST00000490638 A0A0U1RQG5 324 aaPredicted RBP16.58■□□□□ 0.25
ARHGEF39-205ENST00000490638 SUSD4Q5VX71 490 aa16.58■□□□□ 0.25
ARHGEF39-205ENST00000490638 CALML4Q96GE6 196 aa16.58■□□□□ 0.25
ARHGEF39-205ENST00000490638 SOS2Q07890 1332 aaPredicted RBP16.58■□□□□ 0.24
ARHGEF39-205ENST00000490638 HLFQ16534 295 aa16.58■□□□□ 0.24
ARHGEF39-205ENST00000490638 MAP3K11Q16584 847 aa16.58■□□□□ 0.24
ARHGEF39-205ENST00000490638 RRP36Q96EU6 259 aaKnown RBP16.58■□□□□ 0.24
ARHGEF39-205ENST00000490638 LEMD3Q9Y2U8 911 aa16.58■□□□□ 0.24
ARHGEF39-205ENST00000490638 TNFAIP1Q13829 316 aa16.58■□□□□ 0.24
ARHGEF39-205ENST00000490638 TMC4Q7Z404 712 aa16.58■□□□□ 0.24
ARHGEF39-205ENST00000490638 ZNHIT6Q9NWK9 470 aaKnown RBP16.58■□□□□ 0.24
ARHGEF39-205ENST00000490638 SPDYE3A6NKU9 549 aa16.57■□□□□ 0.24
ARHGEF39-205ENST00000490638 PRKCSHP14314 528 aaPredicted RBP16.57■□□□□ 0.24
ARHGEF39-205ENST00000490638 PHKA1P46020 1223 aa16.57■□□□□ 0.24
ARHGEF39-205ENST00000490638 FSIP1Q8NA03 581 aa16.57■□□□□ 0.24
ARHGEF39-205ENST00000490638 SMARCE1Q969G3 411 aa16.57■□□□□ 0.24
ARHGEF39-205ENST00000490638 ARHGEF10LQ9HCE6 1279 aa16.57■□□□□ 0.24
ARHGEF39-205ENST00000490638 RTL9Q8NET4 1388 aa16.57■□□□□ 0.24
ARHGEF39-205ENST00000490638 MADDQ8WXG6 1647 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms