RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 MSX1P28360 303 aa11.23□□□□□ -0.61
TRAPPC12-221ENST00000489032 ZNF211Q13398 564 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC12-221ENST00000489032 SAFB2Q14151 953 aaKnown RBP eCLIP11.23□□□□□ -0.619e-7■■■□□ 15.2
TRAPPC12-221ENST00000489032 C11orf91Q3C1V1 193 aa11.23□□□□□ -0.61
TRAPPC12-221ENST00000489032 COX20Q5RI15 118 aa11.23□□□□□ -0.61
TRAPPC12-221ENST00000489032 FAM196AQ6ZSG2 479 aa11.23□□□□□ -0.61
TRAPPC12-221ENST00000489032 CARD11Q9BXL7 1154 aa11.23□□□□□ -0.61
TRAPPC12-221ENST00000489032 TUT1Q9H6E5 874 aaKnown RBP11.23□□□□□ -0.61
TRAPPC12-221ENST00000489032 GPAMQ9HCL2 828 aa11.23□□□□□ -0.61
TRAPPC12-221ENST00000489032 ANKIB1Q9P2G1 1089 aa11.23□□□□□ -0.61
TRAPPC12-221ENST00000489032 EIF3AQ14152 1382 aaKnown RBP11.23□□□□□ -0.61
TRAPPC12-221ENST00000489032 RREB1Q92766 1687 aa11.23□□□□□ -0.61
TRAPPC12-221ENST00000489032 NRAPQ86VF7 1730 aa11.23□□□□□ -0.61
TRAPPC12-221ENST00000489032 F11P03951 625 aa11.22□□□□□ -0.61
TRAPPC12-221ENST00000489032 PTSQ03393 145 aa11.22□□□□□ -0.61
TRAPPC12-221ENST00000489032 DGKZQ13574 1117 aa11.22□□□□□ -0.61
TRAPPC12-221ENST00000489032 NUP188Q5SRE5 1749 aa11.22□□□□□ -0.61
TRAPPC12-221ENST00000489032 RIPOR1Q6ZS17 1223 aa11.22□□□□□ -0.61
TRAPPC12-221ENST00000489032 SAP130Q9H0E3 1048 aa11.22□□□□□ -0.61
TRAPPC12-221ENST00000489032 BTG4Q9NY30 223 aa11.22□□□□□ -0.61
TRAPPC12-221ENST00000489032 GPC6Q9Y625 555 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC12-221ENST00000489032 DNMT3AQ9Y6K1 912 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC12-221ENST00000489032 CHD4Q14839 1912 aa11.21□□□□□ -0.61
TRAPPC12-221ENST00000489032 ABCA3Q99758 1704 aa11.21□□□□□ -0.61
TRAPPC12-221ENST00000489032 FAM13AO94988 1023 aa11.21□□□□□ -0.61
TRAPPC12-221ENST00000489032 AAMPQ13685 434 aa11.21□□□□□ -0.61
TRAPPC12-221ENST00000489032 ABTB2Q8N961 1025 aa11.21□□□□□ -0.61
TRAPPC12-221ENST00000489032 STIM2Q9P246 746 aa11.21□□□□□ -0.61
TRAPPC12-221ENST00000489032 THSD7AQ9UPZ6 1657 aa11.2□□□□□ -0.62
TRAPPC12-221ENST00000489032 ARHGEF10O15013 1369 aa11.2□□□□□ -0.62
TRAPPC12-221ENST00000489032 GPRASP1Q5JY77 1395 aa11.2□□□□□ -0.62
TRAPPC12-221ENST00000489032 PLEKHH1Q9ULM0 1364 aa11.2□□□□□ -0.62
TRAPPC12-221ENST00000489032 CENPJQ9HC77 1338 aaPredicted RBP11.2□□□□□ -0.62
TRAPPC12-221ENST00000489032 SOWAHDA6NJG2 315 aa11.2□□□□□ -0.62
TRAPPC12-221ENST00000489032 ICMTO60725 284 aa11.2□□□□□ -0.62
TRAPPC12-221ENST00000489032 EFHC2Q5JST6 749 aa11.2□□□□□ -0.62
TRAPPC12-221ENST00000489032 TMCO4Q5TGY1 634 aa11.2□□□□□ -0.62
TRAPPC12-221ENST00000489032 PODXL2Q9NZ53 605 aa11.2□□□□□ -0.62
TRAPPC12-221ENST00000489032 SPATA31A5Q5VU36 1347 aa11.19□□□□□ -0.62
TRAPPC12-221ENST00000489032 SPATA31A7Q8IWB4 1347 aa11.19□□□□□ -0.62
TRAPPC12-221ENST00000489032 MTMR3Q13615 1198 aa11.19□□□□□ -0.62
TRAPPC12-221ENST00000489032 SND1Q7KZF4 910 aaKnown RBP eCLIP11.19□□□□□ -0.62
TRAPPC12-221ENST00000489032 KLK14Q9P0G3 267 aa11.19□□□□□ -0.62
TRAPPC12-221ENST00000489032 LRFN2Q9ULH4 789 aa11.19□□□□□ -0.62
TRAPPC12-221ENST00000489032 COL14A1Q05707 1796 aaKnown RBP11.18□□□□□ -0.62
TRAPPC12-221ENST00000489032 ARHGEF28Q8N1W1 1705 aaKnown RBP11.18□□□□□ -0.62
TRAPPC12-221ENST00000489032 SBNO1A3KN83 1393 aa11.18□□□□□ -0.62
TRAPPC12-221ENST00000489032 H7C1W4 665 aa11.18□□□□□ -0.62
TRAPPC12-221ENST00000489032 ALKBH2Q6NS38 261 aa11.18□□□□□ -0.62
TRAPPC12-221ENST00000489032 IFT43Q96FT9 208 aa11.18□□□□□ -0.62
TRAPPC12-221ENST00000489032 RUBCNLQ9H714 662 aa11.18□□□□□ -0.62
TRAPPC12-221ENST00000489032 FMN2Q9NZ56 1722 aa11.18□□□□□ -0.62
TRAPPC12-221ENST00000489032 A0A1W2PNR3 127 aa11.17□□□□□ -0.62
TRAPPC12-221ENST00000489032 SNRPBP14678 240 aaKnown RBP11.17□□□□□ -0.62
TRAPPC12-221ENST00000489032 ATP4AP20648 1035 aa11.17□□□□□ -0.62
TRAPPC12-221ENST00000489032 ZIC5Q96T25 663 aa11.17□□□□□ -0.62
TRAPPC12-221ENST00000489032 HIRIP3Q9BW71 556 aaPredicted RBP11.17□□□□□ -0.62
TRAPPC12-221ENST00000489032 SLC35F4A4IF30 521 aa11.16□□□□□ -0.62
TRAPPC12-221ENST00000489032 NOM1Q5C9Z4 860 aaKnown RBP11.16□□□□□ -0.62
TRAPPC12-221ENST00000489032 LRRC69Q6ZNQ3 347 aa11.16□□□□□ -0.62
TRAPPC12-221ENST00000489032 CCDC155Q8N6L0 562 aa11.16□□□□□ -0.62
TRAPPC12-221ENST00000489032 SUSD3Q96L08 255 aa11.16□□□□□ -0.62
TRAPPC12-221ENST00000489032 CEP350Q5VT06 3117 aa11.16□□□□□ -0.62
TRAPPC12-221ENST00000489032 MPSTP25325 297 aa11.15□□□□□ -0.62
TRAPPC12-221ENST00000489032 CRISPLD1Q9H336 500 aa11.15□□□□□ -0.62
TRAPPC12-221ENST00000489032 NRKQ7Z2Y5 1582 aa11.15□□□□□ -0.62
TRAPPC12-221ENST00000489032 RGPD8O14715 1765 aaPredicted RBP11.14□□□□□ -0.63
TRAPPC12-221ENST00000489032 LBRQ14739 615 aaKnown RBP11.14□□□□□ -0.63
TRAPPC12-221ENST00000489032 CCDC27Q2M243 656 aa11.14□□□□□ -0.63
TRAPPC12-221ENST00000489032 FAM13BQ9NYF5 915 aa11.14□□□□□ -0.63
TRAPPC12-221ENST00000489032 EVC2Q86UK5 1308 aa11.13□□□□□ -0.63
TRAPPC12-221ENST00000489032 TGFBR3LH3BV60 316 aa11.13□□□□□ -0.63
TRAPPC12-221ENST00000489032 PDE3BQ13370 1112 aa11.13□□□□□ -0.63
TRAPPC12-221ENST00000489032 FIGNL1Q6PIW4 674 aa11.13□□□□□ -0.63
TRAPPC12-221ENST00000489032 NLRP8Q86W28 1048 aa11.13□□□□□ -0.63
TRAPPC12-221ENST00000489032 HSH2DQ96JZ2 352 aa11.13□□□□□ -0.63
TRAPPC12-221ENST00000489032 CDK19Q9BWU1 502 aa11.13□□□□□ -0.63
TRAPPC12-221ENST00000489032 NUCKS1Q9H1E3 243 aaKnown RBP11.13□□□□□ -0.63
TRAPPC12-221ENST00000489032 USP47Q96K76 1375 aa11.13□□□□□ -0.63
TRAPPC12-221ENST00000489032 SPATA31A1Q5TZJ5 1347 aa11.12□□□□□ -0.63
TRAPPC12-221ENST00000489032 ANKARQ7Z5J8 1434 aa11.12□□□□□ -0.63
TRAPPC12-221ENST00000489032 QRICH2Q9H0J4 1663 aa11.12□□□□□ -0.63
TRAPPC12-221ENST00000489032 TNFRSF10BO14763 440 aa11.12□□□□□ -0.63
TRAPPC12-221ENST00000489032 TREML1Q86YW5 311 aa11.12□□□□□ -0.63
TRAPPC12-221ENST00000489032 TTC16Q8NEE8 873 aa11.12□□□□□ -0.63
TRAPPC12-221ENST00000489032 GMCL1Q96IK5 515 aa11.12□□□□□ -0.63
TRAPPC12-221ENST00000489032 UTRNP46939 3433 aa11.12□□□□□ -0.63
TRAPPC12-221ENST00000489032 MYOM1P52179 1685 aa11.11□□□□□ -0.63
TRAPPC12-221ENST00000489032 CASZ1Q86V15 1759 aa11.11□□□□□ -0.63
TRAPPC12-221ENST00000489032 ST20-MTHFSA0A0A6YYL1 179 aa11.11□□□□□ -0.63
TRAPPC12-221ENST00000489032 MICAL2O94851 1124 aa11.11□□□□□ -0.63
TRAPPC12-221ENST00000489032 EIF1AXP47813 144 aaKnown RBP11.11□□□□□ -0.63
TRAPPC12-221ENST00000489032 IER5Q5VY09 327 aa11.11□□□□□ -0.63
TRAPPC12-221ENST00000489032 ZNF280CQ8ND82 737 aa11.11□□□□□ -0.63
TRAPPC12-221ENST00000489032 C7orf43Q8WVR3 580 aa11.11□□□□□ -0.63
TRAPPC12-221ENST00000489032 CEP63Q96MT8 703 aa11.11□□□□□ -0.63
TRAPPC12-221ENST00000489032 SYT17Q9BSW7 474 aa11.11□□□□□ -0.63
TRAPPC12-221ENST00000489032 SBNO2Q9Y2G9 1366 aa11.11□□□□□ -0.63
TRAPPC12-221ENST00000489032 TULP4Q9NRJ4 1543 aa11.1□□□□□ -0.63
TRAPPC12-221ENST00000489032 LCE2BO14633 110 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms