RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 IREB2P48200 963 aaKnown RBP6.88□□□□□ -1.31
RFC4-213ENST00000489028 PIP4K2BP78356 416 aa6.88□□□□□ -1.31
RFC4-213ENST00000489028 FMR1Q06787 632 aaKnown RBP eCLIP6.88□□□□□ -1.31
RFC4-213ENST00000489028 ENOX2Q16206 610 aaKnown RBP6.88□□□□□ -1.31
RFC4-213ENST00000489028 SND1Q7KZF4 910 aaKnown RBP eCLIP6.88□□□□□ -1.31
RFC4-213ENST00000489028 AGGF1Q8N302 714 aaeCLIP6.88□□□□□ -1.31
RFC4-213ENST00000489028 SLC7A3Q8WY07 619 aa6.88□□□□□ -1.31
RFC4-213ENST00000489028 SSBP4Q9BWG4 385 aaPredicted RBP6.88□□□□□ -1.31
RFC4-213ENST00000489028 MRPL18Q9H0U6 180 aaKnown RBP6.88□□□□□ -1.31
RFC4-213ENST00000489028 SEC31BQ9NQW1 1179 aa6.88□□□□□ -1.31
RFC4-213ENST00000489028 A0A096LPE4 126 aa6.87□□□□□ -1.31
RFC4-213ENST00000489028 A0A1W2PPZ6 126 aa6.87□□□□□ -1.31
RFC4-213ENST00000489028 ESRRAP11474 423 aaPredicted RBP6.87□□□□□ -1.31
RFC4-213ENST00000489028 CABP4P57796 275 aa6.87□□□□□ -1.31
RFC4-213ENST00000489028 PLCB3Q01970 1234 aa6.87□□□□□ -1.31
RFC4-213ENST00000489028 FAM117BQ6P1L5 589 aa6.87□□□□□ -1.31
RFC4-213ENST00000489028 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.87□□□□□ -1.31
RFC4-213ENST00000489028 KLHL23Q8NBE8 558 aa6.87□□□□□ -1.31
RFC4-213ENST00000489028 GLIS3Q8NEA6 775 aa6.87□□□□□ -1.31
RFC4-213ENST00000489028 UBASH3BQ8TF42 649 aa6.87□□□□□ -1.31
RFC4-213ENST00000489028 WNT8BQ93098 351 aa6.87□□□□□ -1.31
RFC4-213ENST00000489028 MEGF10Q96KG7 1140 aa6.87□□□□□ -1.31
RFC4-213ENST00000489028 EHD4Q9H223 541 aa6.87□□□□□ -1.31
RFC4-213ENST00000489028 ABCB6Q9NP58 842 aa6.87□□□□□ -1.31
RFC4-213ENST00000489028 FAM177BA6PVY3 158 aa6.86□□□□□ -1.31
RFC4-213ENST00000489028 IKBKEQ14164 716 aa6.86□□□□□ -1.31
RFC4-213ENST00000489028 GRM2Q14416 872 aa6.86□□□□□ -1.31
RFC4-213ENST00000489028 RSPO4Q2I0M5 234 aaPredicted RBP6.86□□□□□ -1.31
RFC4-213ENST00000489028 ZNF423Q2M1K9 1284 aa6.86□□□□□ -1.31
RFC4-213ENST00000489028 KIAA1211Q6ZU35 1233 aa6.86□□□□□ -1.31
RFC4-213ENST00000489028 ZSCAN29Q8IWY8 852 aaPredicted RBP6.86□□□□□ -1.31
RFC4-213ENST00000489028 TMEM130Q8N3G9 435 aa6.86□□□□□ -1.31
RFC4-213ENST00000489028 AKTIPQ9H8T0 292 aa6.86□□□□□ -1.31
RFC4-213ENST00000489028 OSGEPQ9NPF4 335 aa6.86□□□□□ -1.31
RFC4-213ENST00000489028 WWC3Q9ULE0 1092 aa6.86□□□□□ -1.31
RFC4-213ENST00000489028 GADD45BO75293 160 aaPredicted RBP6.85□□□□□ -1.31
RFC4-213ENST00000489028 P4HBP07237 508 aaKnown RBP6.85□□□□□ -1.31
RFC4-213ENST00000489028 MAPK8P45983 427 aa6.85□□□□□ -1.31
RFC4-213ENST00000489028 NLRP12P59046 1061 aa6.85□□□□□ -1.31
RFC4-213ENST00000489028 SUZ12Q15022 739 aaKnown RBP6.85□□□□□ -1.31
RFC4-213ENST00000489028 NKAPLQ5M9Q1 402 aa6.85□□□□□ -1.31
RFC4-213ENST00000489028 PRPF40BQ6NWY9 871 aaKnown RBP6.85□□□□□ -1.31
RFC4-213ENST00000489028 Q6ZS46 218 aa6.85□□□□□ -1.31
RFC4-213ENST00000489028 ACAD11Q709F0 780 aa6.85□□□□□ -1.31
RFC4-213ENST00000489028 ZNF576Q9H609 170 aa6.85□□□□□ -1.31
RFC4-213ENST00000489028 ITPKAP23677 461 aa6.84□□□□□ -1.31
RFC4-213ENST00000489028 ITGB7P26010 798 aa6.84□□□□□ -1.31
RFC4-213ENST00000489028 PCDH1Q08174 1060 aa6.84□□□□□ -1.31
RFC4-213ENST00000489028 C19orf57Q0VDD7 668 aa6.84□□□□□ -1.31
RFC4-213ENST00000489028 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.84□□□□□ -1.31
RFC4-213ENST00000489028 TMEM238LA0A1B0GVL6 79 aa6.83□□□□□ -1.32
RFC4-213ENST00000489028 ADAM23O75077 832 aa6.83□□□□□ -1.32
RFC4-213ENST00000489028 DLGAP3O95886 979 aa6.83□□□□□ -1.32
RFC4-213ENST00000489028 DUOXA2Q1HG44 320 aa6.83□□□□□ -1.32
RFC4-213ENST00000489028 DCAF11Q8TEB1 546 aa6.83□□□□□ -1.32
RFC4-213ENST00000489028 NRSN2Q9GZP1 204 aa6.83□□□□□ -1.32
RFC4-213ENST00000489028 CLEC4MQ9H2X3 399 aaPredicted RBP6.83□□□□□ -1.32
RFC4-213ENST00000489028 FAAP100Q0VG06 881 aa6.82□□□□□ -1.32
RFC4-213ENST00000489028 DNAJC14Q6Y2X3 702 aaPredicted RBP6.82□□□□□ -1.32
RFC4-213ENST00000489028 DZIP1LQ8IYY4 767 aaKnown RBP6.82□□□□□ -1.32
RFC4-213ENST00000489028 TP53INP1Q96A56 240 aa6.82□□□□□ -1.32
RFC4-213ENST00000489028 UBL7Q96S82 380 aaPredicted RBP6.82□□□□□ -1.32
RFC4-213ENST00000489028 BCO2Q9BYV7 579 aa6.82□□□□□ -1.32
RFC4-213ENST00000489028 GZF1Q9H116 711 aaPredicted RBP6.82□□□□□ -1.32
RFC4-213ENST00000489028 SOX17Q9H6I2 414 aaPredicted RBP6.82□□□□□ -1.32
RFC4-213ENST00000489028 ANKRD33BA6NCL7 494 aa6.81□□□□□ -1.32
RFC4-213ENST00000489028 K7ELQ4 463 aaPredicted RBP6.81□□□□□ -1.32
RFC4-213ENST00000489028 CTSBP07858 339 aa6.81□□□□□ -1.32
RFC4-213ENST00000489028 GSTM4Q03013 218 aa6.81□□□□□ -1.32
RFC4-213ENST00000489028 NXPE4Q6UWF7 544 aa6.81□□□□□ -1.32
RFC4-213ENST00000489028 TRIM56Q9BRZ2 755 aaKnown RBP6.81□□□□□ -1.32
RFC4-213ENST00000489028 NLRP2Q9NX02 1062 aa6.81□□□□□ -1.32
RFC4-213ENST00000489028 LOC100289279A0A1B0GTE1 492 aa6.8□□□□□ -1.32
RFC4-213ENST00000489028 DYRK3O43781 588 aa6.8□□□□□ -1.32
RFC4-213ENST00000489028 B3GALT4O96024 378 aa6.8□□□□□ -1.32
RFC4-213ENST00000489028 GLB1P16278 677 aa6.8□□□□□ -1.32
RFC4-213ENST00000489028 ARL4DP49703 201 aa6.8□□□□□ -1.32
RFC4-213ENST00000489028 FCGRTP55899 365 aa6.8□□□□□ -1.32
RFC4-213ENST00000489028 PTPN12Q05209 780 aaKnown RBP6.8□□□□□ -1.32
RFC4-213ENST00000489028 USP26Q9BXU7 913 aa6.8□□□□□ -1.32
RFC4-213ENST00000489028 OSBPL7Q9BZF2 842 aa6.8□□□□□ -1.32
RFC4-213ENST00000489028 RNF19AQ9NV58 838 aa6.8□□□□□ -1.32
RFC4-213ENST00000489028 TRAK1Q9UPV9 953 aa6.8□□□□□ -1.32
RFC4-213ENST00000489028 ECEL1O95672 775 aa6.79□□□□□ -1.32
RFC4-213ENST00000489028 NPAS4Q8IUM7 802 aa6.79□□□□□ -1.32
RFC4-213ENST00000489028 FBF1Q8TES7 1133 aa6.79□□□□□ -1.32
RFC4-213ENST00000489028 SEMA6BQ9H3T3 888 aa6.79□□□□□ -1.32
RFC4-213ENST00000489028 ZNF157P51786 506 aaPredicted RBP6.78□□□□□ -1.32
RFC4-213ENST00000489028 C3orf58Q8NDZ4 430 aa6.78□□□□□ -1.32
RFC4-213ENST00000489028 RUSC1Q9BVN2 902 aa6.78□□□□□ -1.32
RFC4-213ENST00000489028 LDHBP07195 334 aaKnown RBP6.77□□□□□ -1.33
RFC4-213ENST00000489028 H2AFB1P0C5Y9 115 aa6.77□□□□□ -1.33
RFC4-213ENST00000489028 H2AFB2P0C5Z0 115 aa6.77□□□□□ -1.33
RFC4-213ENST00000489028 MAOBP27338 520 aa6.77□□□□□ -1.33
RFC4-213ENST00000489028 PREPP48147 710 aa6.77□□□□□ -1.33
RFC4-213ENST00000489028 RPS26P11Q5JNZ5 115 aaPredicted RBP6.77□□□□□ -1.33
RFC4-213ENST00000489028 ALG1LQ6GMV1 187 aa6.77□□□□□ -1.33
RFC4-213ENST00000489028 DTHD1Q6ZMT9 781 aa6.77□□□□□ -1.33
RFC4-213ENST00000489028 ARMC10Q8N2F6 343 aa6.77□□□□□ -1.33
RFC4-213ENST00000489028 FAM46AQ96IP4 442 aaKnown RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms