RNA–Protein interactions for RNA: ENST00000488914.1

CTNNB1-215, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-215ENST00000488914 STOML1Q9UBI4 398 aa8.73□□□□□ -1.01
CTNNB1-215ENST00000488914 EGFL7Q9UHF1 273 aa8.73□□□□□ -1.01
CTNNB1-215ENST00000488914 PREPP48147 710 aa8.72□□□□□ -1.01
CTNNB1-215ENST00000488914 ARHGAP4P98171 946 aa8.72□□□□□ -1.01
CTNNB1-215ENST00000488914 IKBKEQ14164 716 aa8.72□□□□□ -1.01
CTNNB1-215ENST00000488914 HMX2A2RU54 273 aa8.71□□□□□ -1.02
CTNNB1-215ENST00000488914 DHX15O43143 795 aaKnown RBP8.71□□□□□ -1.02
CTNNB1-215ENST00000488914 DLGAP3O95886 979 aa8.71□□□□□ -1.02
CTNNB1-215ENST00000488914 TRIM42Q8IWZ5 723 aa8.71□□□□□ -1.02
CTNNB1-215ENST00000488914 RETREG2Q8NC44 543 aa8.71□□□□□ -1.02
CTNNB1-215ENST00000488914 MYRFLQ96LU7 910 aa8.71□□□□□ -1.02
CTNNB1-215ENST00000488914 RUSC1Q9BVN2 902 aa8.71□□□□□ -1.02
CTNNB1-215ENST00000488914 C7orf69Q9H7B7 122 aa8.71□□□□□ -1.02
CTNNB1-215ENST00000488914 A0A1W2PP55 124 aa8.7□□□□□ -1.02
CTNNB1-215ENST00000488914 IGLV1-40P01703 118 aa8.7□□□□□ -1.02
CTNNB1-215ENST00000488914 SSTR4P31391 388 aa8.7□□□□□ -1.02
CTNNB1-215ENST00000488914 GLYCTKQ8IVS8 523 aa8.7□□□□□ -1.02
CTNNB1-215ENST00000488914 BRPF3Q9ULD4 1205 aa8.7□□□□□ -1.02
CTNNB1-215ENST00000488914 MED26O95402 600 aa8.69□□□□□ -1.02
CTNNB1-215ENST00000488914 ESRRAP11474 423 aaPredicted RBP8.69□□□□□ -1.02
CTNNB1-215ENST00000488914 ARL4DP49703 201 aa8.69□□□□□ -1.02
CTNNB1-215ENST00000488914 SPRED3Q2MJR0 410 aa8.69□□□□□ -1.02
CTNNB1-215ENST00000488914 NBPF11Q86T75 865 aa8.69□□□□□ -1.02
CTNNB1-215ENST00000488914 TXNDC2Q86VQ3 553 aa8.69□□□□□ -1.02
CTNNB1-215ENST00000488914 TCF12Q99081 682 aa8.69□□□□□ -1.02
CTNNB1-215ENST00000488914 KRTAP4-8Q9BYQ9 185 aa8.69□□□□□ -1.02
CTNNB1-215ENST00000488914 RNF208Q9H0X6 261 aa8.69□□□□□ -1.02
CTNNB1-215ENST00000488914 TGFB1P01137 390 aa8.68□□□□□ -1.02
CTNNB1-215ENST00000488914 BMP3P12645 472 aa8.68□□□□□ -1.02
CTNNB1-215ENST00000488914 GRIA4P48058 902 aa8.68□□□□□ -1.02
CTNNB1-215ENST00000488914 ORC1Q13415 861 aa8.68□□□□□ -1.02
CTNNB1-215ENST00000488914 UVSSAQ2YD98 709 aa8.68□□□□□ -1.02
CTNNB1-215ENST00000488914 GALNT12Q8IXK2 581 aa8.68□□□□□ -1.02
CTNNB1-215ENST00000488914 FAM20CQ8IXL6 584 aa8.68□□□□□ -1.02
CTNNB1-215ENST00000488914 USP26Q9BXU7 913 aa8.68□□□□□ -1.02
CTNNB1-215ENST00000488914 LOC100289279A0A1B0GTE1 492 aa8.67□□□□□ -1.02
CTNNB1-215ENST00000488914 ZNF423Q2M1K9 1284 aa8.67□□□□□ -1.02
CTNNB1-215ENST00000488914 ANKRD34AQ69YU3 496 aa8.67□□□□□ -1.02
CTNNB1-215ENST00000488914 B4GALNT3Q6L9W6 998 aa8.67□□□□□ -1.02
CTNNB1-215ENST00000488914 A0A096LPE4 126 aa8.66□□□□□ -1.02
CTNNB1-215ENST00000488914 A0A1W2PPZ6 126 aa8.66□□□□□ -1.02
CTNNB1-215ENST00000488914 MEGF11A6BM72 1044 aa8.66□□□□□ -1.02
CTNNB1-215ENST00000488914 SART1O43290 800 aaKnown RBP8.66□□□□□ -1.02
CTNNB1-215ENST00000488914 GSTM4Q03013 218 aa8.66□□□□□ -1.02
CTNNB1-215ENST00000488914 NFIAQ12857 509 aa8.66□□□□□ -1.02
CTNNB1-215ENST00000488914 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.66□□□□□ -1.02
CTNNB1-215ENST00000488914 SLC51AQ86UW1 340 aa8.66□□□□□ -1.02
CTNNB1-215ENST00000488914 ZDHHC13Q8IUH4 622 aa8.66□□□□□ -1.02
CTNNB1-215ENST00000488914 CCNJLQ8IV13 435 aa8.66□□□□□ -1.02
CTNNB1-215ENST00000488914 TMPRSS13Q9BYE2 586 aa8.66□□□□□ -1.02
CTNNB1-215ENST00000488914 KCNF1Q9H3M0 494 aa8.66□□□□□ -1.02
CTNNB1-215ENST00000488914 LIN7BQ9HAP6 207 aa8.66□□□□□ -1.02
CTNNB1-215ENST00000488914 IGHA2P01877 340 aa8.65□□□□□ -1.02
CTNNB1-215ENST00000488914 DRD2P14416 443 aa8.65□□□□□ -1.02
CTNNB1-215ENST00000488914 FDX2Q6P4F2 183 aa8.65□□□□□ -1.02
CTNNB1-215ENST00000488914 BEND4Q6ZU67 534 aa8.65□□□□□ -1.02
CTNNB1-215ENST00000488914 FAM129BQ96TA1 746 aa8.65□□□□□ -1.02
CTNNB1-215ENST00000488914 NRSN2Q9GZP1 204 aa8.65□□□□□ -1.02
CTNNB1-215ENST00000488914 CTSBP07858 339 aa8.64□□□□□ -1.03
CTNNB1-215ENST00000488914 CD97P48960 835 aa8.64□□□□□ -1.03
CTNNB1-215ENST00000488914 SGO2Q562F6 1265 aa8.64□□□□□ -1.03
CTNNB1-215ENST00000488914 RNF43Q68DV7 783 aa8.64□□□□□ -1.03
CTNNB1-215ENST00000488914 CLEC10AQ8IUN9 316 aa8.64□□□□□ -1.03
CTNNB1-215ENST00000488914 PSMG3-AS1Q96PY0 264 aa8.64□□□□□ -1.03
CTNNB1-215ENST00000488914 FAM83CQ9BQN1 747 aa8.64□□□□□ -1.03
CTNNB1-215ENST00000488914 SOX17Q9H6I2 414 aaPredicted RBP8.64□□□□□ -1.03
CTNNB1-215ENST00000488914 PRR19A6NJB7 356 aa8.63□□□□□ -1.03
CTNNB1-215ENST00000488914 GPR182O15218 404 aa8.63□□□□□ -1.03
CTNNB1-215ENST00000488914 PCDH1Q08174 1060 aa8.63□□□□□ -1.03
CTNNB1-215ENST00000488914 NUTM2GQ5VZR2 741 aa8.63□□□□□ -1.03
CTNNB1-215ENST00000488914 C12orf50Q8NA57 414 aaPredicted RBP8.63□□□□□ -1.03
CTNNB1-215ENST00000488914 PCMTD2Q9NV79 361 aa8.63□□□□□ -1.03
CTNNB1-215ENST00000488914 GSC2O15499 205 aa8.62□□□□□ -1.03
CTNNB1-215ENST00000488914 NDUFB5O43674 189 aa8.62□□□□□ -1.03
CTNNB1-215ENST00000488914 TIAF1O95411 115 aa8.62□□□□□ -1.03
CTNNB1-215ENST00000488914 SMG8Q8ND04 991 aaKnown RBP8.62□□□□□ -1.03
CTNNB1-215ENST00000488914 NIF3L1Q9GZT8 377 aa8.62□□□□□ -1.03
CTNNB1-215ENST00000488914 NPHS2Q9NP85 383 aa8.62□□□□□ -1.03
CTNNB1-215ENST00000488914 TIMELESSQ9UNS1 1208 aa8.62□□□□□ -1.03
CTNNB1-215ENST00000488914 TTBK1Q5TCY1 1321 aaPredicted RBP8.61□□□□□ -1.03
CTNNB1-215ENST00000488914 MAP4P27816 1152 aaKnown RBP8.61□□□□□ -1.03
CTNNB1-215ENST00000488914 KIAA0319Q5VV43 1072 aa8.61□□□□□ -1.03
CTNNB1-215ENST00000488914 SHISA5Q8N114 240 aa8.61□□□□□ -1.03
CTNNB1-215ENST00000488914 SHKBP1Q8TBC3 707 aa8.61□□□□□ -1.03
CTNNB1-215ENST00000488914 DBNDD2Q9BQY9 259 aa8.61□□□□□ -1.03
CTNNB1-215ENST00000488914 CLEC4MQ9H2X3 399 aaPredicted RBP8.61□□□□□ -1.03
CTNNB1-215ENST00000488914 GAS2O43903 313 aaKnown RBP8.6□□□□□ -1.03
CTNNB1-215ENST00000488914 CPNE3O75131 537 aaKnown RBP8.6□□□□□ -1.03
CTNNB1-215ENST00000488914 ADAMTS4O75173 837 aa8.6□□□□□ -1.03
CTNNB1-215ENST00000488914 ECEL1O95672 775 aa8.6□□□□□ -1.03
CTNNB1-215ENST00000488914 EXOSC6Q5RKV6 272 aaKnown RBP8.6□□□□□ -1.03
CTNNB1-215ENST00000488914 SUGCTQ9HAC7 445 aa8.6□□□□□ -1.03
CTNNB1-215ENST00000488914 EIF1AYO14602 144 aaKnown RBP8.59□□□□□ -1.03
CTNNB1-215ENST00000488914 MAOBP27338 520 aa8.59□□□□□ -1.03
CTNNB1-215ENST00000488914 CDPF1Q6NVV7 123 aa8.59□□□□□ -1.03
CTNNB1-215ENST00000488914 TMC1Q8TDI8 760 aa8.59□□□□□ -1.03
CTNNB1-215ENST00000488914 MFSD14AQ96MC6 490 aa8.59□□□□□ -1.03
CTNNB1-215ENST00000488914 TRIM56Q9BRZ2 755 aaKnown RBP8.59□□□□□ -1.03
CTNNB1-215ENST00000488914 EHD4Q9H223 541 aa8.59□□□□□ -1.03
CTNNB1-215ENST00000488914 HIF3AQ9Y2N7 669 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms