RNA–Protein interactions for RNA: ENST00000488737.6

ABCB1-207, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 1 (best)

Gene ABCB1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-207ENST00000488737 LRP5O75197 1615 aa16.67■□□□□ 0.26
ABCB1-207ENST00000488737 FGAP02671 866 aa16.67■□□□□ 0.26
ABCB1-207ENST00000488737 CTSWP56202 376 aa16.67■□□□□ 0.26
ABCB1-207ENST00000488737 PLCB2Q00722 1185 aa16.67■□□□□ 0.26
ABCB1-207ENST00000488737 SCARF1Q14162 830 aa16.67■□□□□ 0.26
ABCB1-207ENST00000488737 NOLC1Q14978 699 aaKnown RBP eCLIP16.67■□□□□ 0.26
ABCB1-207ENST00000488737 TTF1Q15361 905 aaPredicted RBP16.67■□□□□ 0.26
ABCB1-207ENST00000488737 MB21D2Q8IYB1 491 aaPredicted RBP16.67■□□□□ 0.26
ABCB1-207ENST00000488737 TTC12Q9H892 705 aaPredicted RBP16.67■□□□□ 0.26
ABCB1-207ENST00000488737 ANKRD18BA2A2Z9 1011 aa16.66■□□□□ 0.26
ABCB1-207ENST00000488737 ITGA6P23229 1130 aa16.66■□□□□ 0.26
ABCB1-207ENST00000488737 LDHAL6AQ6ZMR3 332 aa16.66■□□□□ 0.26
ABCB1-207ENST00000488737 NCOA7Q8NI08 942 aa16.66■□□□□ 0.26
ABCB1-207ENST00000488737 NCOA5Q9HCD5 579 aaKnown RBP16.66■□□□□ 0.26
ABCB1-207ENST00000488737 CYP19A1P11511 503 aaPredicted RBP16.65■□□□□ 0.26
ABCB1-207ENST00000488737 HSP90AA2PQ14568 343 aaPredicted RBP16.65■□□□□ 0.26
ABCB1-207ENST00000488737 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.65■□□□□ 0.26
ABCB1-207ENST00000488737 LUZP1Q86V48 1076 aa16.65■□□□□ 0.26
ABCB1-207ENST00000488737 ZNF830Q96NB3 372 aaPredicted RBP16.65■□□□□ 0.26
ABCB1-207ENST00000488737 ERVV-1B6SEH8 477 aa16.65■□□□□ 0.26
ABCB1-207ENST00000488737 GPAA1O43292 621 aa16.65■□□□□ 0.26
ABCB1-207ENST00000488737 PRC1O43663 620 aa16.65■□□□□ 0.26
ABCB1-207ENST00000488737 C4AP0C0L4 1744 aa16.65■□□□□ 0.26
ABCB1-207ENST00000488737 C4BP0C0L5 1744 aa16.65■□□□□ 0.26
ABCB1-207ENST00000488737 HLFQ16534 295 aa16.65■□□□□ 0.26
ABCB1-207ENST00000488737 CCDC73Q6ZRK6 1079 aa16.65■□□□□ 0.26
ABCB1-207ENST00000488737 VGLL2Q8N8G2 317 aa16.65■□□□□ 0.26
ABCB1-207ENST00000488737 USP28Q96RU2 1077 aa16.65■□□□□ 0.26
ABCB1-207ENST00000488737 PUS7LQ9H0K6 701 aaKnown RBP16.65■□□□□ 0.26
ABCB1-207ENST00000488737 GREM2Q9H772 168 aa16.65■□□□□ 0.26
ABCB1-207ENST00000488737 NAP1L2Q9ULW6 460 aaPredicted RBP16.65■□□□□ 0.26
ABCB1-207ENST00000488737 UQCRHLA0A096LP55 91 aa16.64■□□□□ 0.25
ABCB1-207ENST00000488737 DYNC1I1O14576 645 aa16.64■□□□□ 0.25
ABCB1-207ENST00000488737 UQCRHP07919 91 aa16.64■□□□□ 0.25
ABCB1-207ENST00000488737 FDPSP14324 419 aaKnown RBP16.64■□□□□ 0.25
ABCB1-207ENST00000488737 ADD2P35612 726 aa16.64■□□□□ 0.25
ABCB1-207ENST00000488737 MCAMP43121 646 aa16.64■□□□□ 0.25
ABCB1-207ENST00000488737 CHST3Q7LGC8 479 aa16.64■□□□□ 0.25
ABCB1-207ENST00000488737 RALYLQ86SE5 291 aaKnown RBP16.64■□□□□ 0.25
ABCB1-207ENST00000488737 CCAR1Q8IX12 1150 aaKnown RBP16.64■□□□□ 0.25
ABCB1-207ENST00000488737 CCDC85AQ96PX6 553 aaPredicted RBP16.64■□□□□ 0.25
ABCB1-207ENST00000488737 IRS4O14654 1257 aaPredicted RBP16.63■□□□□ 0.25
ABCB1-207ENST00000488737 ZNF213O14771 459 aa16.63■□□□□ 0.25
ABCB1-207ENST00000488737 PDE8AO60658 829 aa16.63■□□□□ 0.25
ABCB1-207ENST00000488737 ZNF165P49910 485 aa16.63■□□□□ 0.25
ABCB1-207ENST00000488737 UBE3CQ15386 1083 aa16.63■□□□□ 0.25
ABCB1-207ENST00000488737 ILDR1Q86SU0 546 aaPredicted RBP16.63■□□□□ 0.25
ABCB1-207ENST00000488737 PRIMPOLQ96LW4 560 aa16.63■□□□□ 0.25
ABCB1-207ENST00000488737 AK7Q96M32 723 aa16.63■□□□□ 0.25
ABCB1-207ENST00000488737 CNNM1Q9NRU3 951 aa16.63■□□□□ 0.25
ABCB1-207ENST00000488737 BTG4Q9NY30 223 aa16.63■□□□□ 0.25
ABCB1-207ENST00000488737 RTEL1Q9NZ71 1219 aa16.63■□□□□ 0.25
ABCB1-207ENST00000488737 MYO5AQ9Y4I1 1855 aaKnown RBP16.63■□□□□ 0.25
ABCB1-207ENST00000488737 DOCK2Q92608 1830 aa16.63■□□□□ 0.25
ABCB1-207ENST00000488737 GPTP24298 496 aa16.63■□□□□ 0.25
ABCB1-207ENST00000488737 ARID4AP29374 1257 aaPredicted RBP16.63■□□□□ 0.25
ABCB1-207ENST00000488737 HAND2P61296 217 aa16.63■□□□□ 0.25
ABCB1-207ENST00000488737 FAM160A1Q05DH4 1040 aa16.63■□□□□ 0.25
ABCB1-207ENST00000488737 PLA2G4DQ86XP0 818 aa16.63■□□□□ 0.25
ABCB1-207ENST00000488737 ENGASEQ8NFI3 743 aa16.63■□□□□ 0.25
ABCB1-207ENST00000488737 KIAA1524Q8TCG1 905 aa16.63■□□□□ 0.25
ABCB1-207ENST00000488737 KLF18A0A0U1RQI7 1052 aa16.62■□□□□ 0.25
ABCB1-207ENST00000488737 PDE8BO95263 885 aa16.62■□□□□ 0.25
ABCB1-207ENST00000488737 UQCRFS1P1P0C7P4 283 aa16.62■□□□□ 0.25
ABCB1-207ENST00000488737 IL6STP40189 918 aaPredicted RBP16.62■□□□□ 0.25
ABCB1-207ENST00000488737 ANTXR2P58335 489 aa16.62■□□□□ 0.25
ABCB1-207ENST00000488737 CEBPZQ03701 1054 aaKnown RBP16.62■□□□□ 0.25
ABCB1-207ENST00000488737 STX1AQ16623 288 aa16.62■□□□□ 0.25
ABCB1-207ENST00000488737 BRAPQ7Z569 592 aa16.62■□□□□ 0.25
ABCB1-207ENST00000488737 MPNDQ8N594 471 aa16.62■□□□□ 0.25
ABCB1-207ENST00000488737 KCNF1Q9H3M0 494 aa16.62■□□□□ 0.25
ABCB1-207ENST00000488737 HPS5Q9UPZ3 1129 aa16.62■□□□□ 0.25
ABCB1-207ENST00000488737 A0A1W2PQ27 194 aa16.61■□□□□ 0.25
ABCB1-207ENST00000488737 A0A1W2PQ64 194 aa16.61■□□□□ 0.25
ABCB1-207ENST00000488737 A0A1W2PQD8 194 aa16.61■□□□□ 0.25
ABCB1-207ENST00000488737 GOLGA8BA8MQT2 603 aa16.61■□□□□ 0.25
ABCB1-207ENST00000488737 KINO60870 393 aaKnown RBP16.61■□□□□ 0.25
ABCB1-207ENST00000488737 CDC25BP30305 580 aa16.61■□□□□ 0.25
ABCB1-207ENST00000488737 ZNF75DP51815 510 aa16.61■□□□□ 0.25
ABCB1-207ENST00000488737 FOSBP53539 338 aa16.61■□□□□ 0.25
ABCB1-207ENST00000488737 SNW1Q13573 536 aaKnown RBP16.61■□□□□ 0.25
ABCB1-207ENST00000488737 PI16Q6UXB8 463 aa16.61■□□□□ 0.25
ABCB1-207ENST00000488737 SYNE4Q8N205 404 aa16.61■□□□□ 0.25
ABCB1-207ENST00000488737 C8orf76Q96K31 380 aa16.61■□□□□ 0.25
ABCB1-207ENST00000488737 SLC4A9Q96Q91 983 aa16.61■□□□□ 0.25
ABCB1-207ENST00000488737 DNAJC25Q9H1X3 360 aa16.61■□□□□ 0.25
ABCB1-207ENST00000488737 GOLPH3LQ9H4A5 285 aa16.61■□□□□ 0.25
ABCB1-207ENST00000488737 TRMT112Q9UI30 125 aaKnown RBP16.61■□□□□ 0.25
ABCB1-207ENST00000488737 ZMYM6O95789 1325 aa16.61■□□□□ 0.25
ABCB1-207ENST00000488737 CHD4Q14839 1912 aa16.61■□□□□ 0.25
ABCB1-207ENST00000488737 TRDNQ13061 729 aa16.61■□□□□ 0.25
ABCB1-207ENST00000488737 DNTTIP2Q5QJE6 756 aaKnown RBP16.61■□□□□ 0.25
ABCB1-207ENST00000488737 SARM1Q6SZW1 724 aa16.61■□□□□ 0.25
ABCB1-207ENST00000488737 FBXO18Q8NFZ0 1043 aa16.61■□□□□ 0.25
ABCB1-207ENST00000488737 ZBTB1Q9Y2K1 713 aa16.61■□□□□ 0.25
ABCB1-207ENST00000488737 KAT6BQ8WYB5 2073 aa16.6■□□□□ 0.25
ABCB1-207ENST00000488737 MROH5Q6ZUA9 1318 aa16.6■□□□□ 0.25
ABCB1-207ENST00000488737 NUTM2BA6NNL0 878 aaPredicted RBP16.6■□□□□ 0.25
ABCB1-207ENST00000488737 NUTM2EB1AL46 878 aaPredicted RBP16.6■□□□□ 0.25
ABCB1-207ENST00000488737 YEATS4O95619 227 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms