RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 LLPHQ9BRT6 129 aaKnown RBP14.87□□□□□ -0.03
CLIC4-202ENST00000488683 ATG3Q9NT62 314 aa14.87□□□□□ -0.03
CLIC4-202ENST00000488683 DDX19AQ9NUU7 478 aaKnown RBP14.87□□□□□ -0.03
CLIC4-202ENST00000488683 MCAMP43121 646 aa14.87□□□□□ -0.03
CLIC4-202ENST00000488683 KLHL34Q8N239 644 aa14.87□□□□□ -0.03
CLIC4-202ENST00000488683 KIAA1524Q8TCG1 905 aa14.87□□□□□ -0.03
CLIC4-202ENST00000488683 C16orf45Q96MC5 204 aaPredicted RBP14.87□□□□□ -0.03
CLIC4-202ENST00000488683 PRC1O43663 620 aa14.86□□□□□ -0.03
CLIC4-202ENST00000488683 APPP05067 770 aa14.86□□□□□ -0.03
CLIC4-202ENST00000488683 ANTXR2P58335 489 aa14.86□□□□□ -0.03
CLIC4-202ENST00000488683 METTL24Q5JXM2 366 aa14.86□□□□□ -0.03
CLIC4-202ENST00000488683 SLC4A9Q96Q91 983 aa14.86□□□□□ -0.03
CLIC4-202ENST00000488683 ZSCAN16Q9H4T2 348 aaPredicted RBP14.86□□□□□ -0.03
CLIC4-202ENST00000488683 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.86□□□□□ -0.03
CLIC4-202ENST00000488683 GOLGA8BA8MQT2 603 aa14.86□□□□□ -0.03
CLIC4-202ENST00000488683 KIF28PB7ZC32 967 aa14.86□□□□□ -0.03
CLIC4-202ENST00000488683 IDH1O75874 414 aaKnown RBP14.86□□□□□ -0.03
CLIC4-202ENST00000488683 SNW1Q13573 536 aaKnown RBP14.86□□□□□ -0.03
CLIC4-202ENST00000488683 NAA30Q147X3 362 aaPredicted RBP14.86□□□□□ -0.03
CLIC4-202ENST00000488683 CCDC158Q5M9N0 1113 aa14.86□□□□□ -0.03
CLIC4-202ENST00000488683 ZNF710Q8N1W2 664 aa14.86□□□□□ -0.03
CLIC4-202ENST00000488683 FSIP1Q8NA03 581 aa14.86□□□□□ -0.03
CLIC4-202ENST00000488683 CARMIL3Q8ND23 1372 aa14.86□□□□□ -0.03
CLIC4-202ENST00000488683 ZNF335Q9H4Z2 1342 aaPredicted RBP14.86□□□□□ -0.03
CLIC4-202ENST00000488683 ITGA6P23229 1130 aa14.86□□□□□ -0.03
CLIC4-202ENST00000488683 LDHAL6AQ6ZMR3 332 aa14.86□□□□□ -0.03
CLIC4-202ENST00000488683 GPAA1O43292 621 aa14.85□□□□□ -0.03
CLIC4-202ENST00000488683 ZNF75DP51815 510 aa14.85□□□□□ -0.03
CLIC4-202ENST00000488683 IFIT5Q13325 482 aaKnown RBP14.85□□□□□ -0.03
CLIC4-202ENST00000488683 NAA16Q6N069 864 aaPredicted RBP14.85□□□□□ -0.03
CLIC4-202ENST00000488683 PHKBQ93100 1093 aa14.85□□□□□ -0.03
CLIC4-202ENST00000488683 NBPF3Q9H094 633 aa14.85□□□□□ -0.03
CLIC4-202ENST00000488683 PRDM10Q9NQV6 1147 aa14.85□□□□□ -0.03
CLIC4-202ENST00000488683 PCDHA7Q9UN72 937 aa14.85□□□□□ -0.03
CLIC4-202ENST00000488683 RIC1Q4ADV7 1423 aa14.85□□□□□ -0.03
CLIC4-202ENST00000488683 MYH7P12883 1935 aa14.85□□□□□ -0.03
CLIC4-202ENST00000488683 AKAP11Q9UKA4 1901 aa14.85□□□□□ -0.03
CLIC4-202ENST00000488683 MARCKSP29966 332 aaPredicted RBP14.85□□□□□ -0.03
CLIC4-202ENST00000488683 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.85□□□□□ -0.03
CLIC4-202ENST00000488683 CACTINQ8WUQ7 758 aaKnown RBP14.85□□□□□ -0.03
CLIC4-202ENST00000488683 SLAIN2Q9P270 581 aa14.85□□□□□ -0.03
CLIC4-202ENST00000488683 WTIPA6NIX2 430 aaPredicted RBP14.84□□□□□ -0.03
CLIC4-202ENST00000488683 FILIP1Q7Z7B0 1213 aa14.84□□□□□ -0.03
CLIC4-202ENST00000488683 CCDC82Q8N4S0 544 aa14.84□□□□□ -0.03
CLIC4-202ENST00000488683 PIH1D3Q9NQM4 214 aaKnown RBP14.84□□□□□ -0.03
CLIC4-202ENST00000488683 CNNM1Q9NRU3 951 aa14.84□□□□□ -0.03
CLIC4-202ENST00000488683 SPTLC3Q9NUV7 552 aa14.84□□□□□ -0.03
CLIC4-202ENST00000488683 CLIP2Q9UDT6 1046 aa14.84□□□□□ -0.03
CLIC4-202ENST00000488683 CFAP45Q9UL16 551 aa14.84□□□□□ -0.03
CLIC4-202ENST00000488683 IQSEC3Q9UPP2 1182 aaPredicted RBP14.84□□□□□ -0.03
CLIC4-202ENST00000488683 HPS5Q9UPZ3 1129 aa14.84□□□□□ -0.03
CLIC4-202ENST00000488683 ZBTB1Q9Y2K1 713 aa14.84□□□□□ -0.03
CLIC4-202ENST00000488683 USP27XA6NNY8 438 aa14.84□□□□□ -0.03
CLIC4-202ENST00000488683 RIOK3O14730 519 aaKnown RBP14.84□□□□□ -0.03
CLIC4-202ENST00000488683 PHKA1P46020 1223 aa14.84□□□□□ -0.03
CLIC4-202ENST00000488683 NDUFA8P51970 172 aa14.84□□□□□ -0.03
CLIC4-202ENST00000488683 HMGN5P82970 282 aaKnown RBP14.84□□□□□ -0.03
CLIC4-202ENST00000488683 SLC9C2Q5TAH2 1124 aa14.84□□□□□ -0.03
CLIC4-202ENST00000488683 PDCL3Q9H2J4 239 aa14.84□□□□□ -0.03
CLIC4-202ENST00000488683 BTG4Q9NY30 223 aa14.84□□□□□ -0.03
CLIC4-202ENST00000488683 RCOR1Q9UKL0 485 aa14.84□□□□□ -0.03
CLIC4-202ENST00000488683 SMIM22K7EJ46 135 aa14.83□□□□□ -0.04
CLIC4-202ENST00000488683 PCCAP05165 728 aaPredicted RBP14.83□□□□□ -0.04
CLIC4-202ENST00000488683 CSF1RP07333 972 aa14.83□□□□□ -0.04
CLIC4-202ENST00000488683 ATP2B3Q16720 1220 aa14.83□□□□□ -0.04
CLIC4-202ENST00000488683 CYB5R4Q7L1T6 521 aa14.83□□□□□ -0.04
CLIC4-202ENST00000488683 TBC1D10CQ8IV04 446 aa14.83□□□□□ -0.04
CLIC4-202ENST00000488683 CMTR1Q8N1G2 835 aaKnown RBP14.83□□□□□ -0.04
CLIC4-202ENST00000488683 ZNF274Q96GC6 653 aaPredicted RBP14.83□□□□□ -0.04
CLIC4-202ENST00000488683 WWC3Q9ULE0 1092 aa14.83□□□□□ -0.04
CLIC4-202ENST00000488683 ITGB4P16144 1822 aa14.83□□□□□ -0.04
CLIC4-202ENST00000488683 SMIM5Q71RC9 77 aa14.83□□□□□ -0.04
CLIC4-202ENST00000488683 AOPEPQ8N6M6 819 aa14.83□□□□□ -0.04
CLIC4-202ENST00000488683 ZBTB38Q8NAP3 1195 aaPredicted RBP14.83□□□□□ -0.04
CLIC4-202ENST00000488683 MYRIPQ8NFW9 859 aa14.83□□□□□ -0.04
CLIC4-202ENST00000488683 TRIM28Q13263 835 aaKnown RBP14.82□□□□□ -0.04
CLIC4-202ENST00000488683 ZSCAN25Q6NSZ9 544 aa14.82□□□□□ -0.04
CLIC4-202ENST00000488683 KIF6Q6ZMV9 814 aa14.82□□□□□ -0.04
CLIC4-202ENST00000488683 ZNF592Q92610 1267 aa14.82□□□□□ -0.04
CLIC4-202ENST00000488683 ZKSCAN3Q9BRR0 538 aa14.82□□□□□ -0.04
CLIC4-202ENST00000488683 ORC3Q9UBD5 711 aaPredicted RBP14.82□□□□□ -0.04
CLIC4-202ENST00000488683 DDX60Q8IY21 1712 aaKnown RBP14.82□□□□□ -0.04
CLIC4-202ENST00000488683 B4E1Z4 1266 aa14.82□□□□□ -0.04
CLIC4-202ENST00000488683 IQCB1Q15051 598 aa14.82□□□□□ -0.04
CLIC4-202ENST00000488683 IMMTQ16891 758 aaKnown RBP14.82□□□□□ -0.04
CLIC4-202ENST00000488683 PLA2G4DQ86XP0 818 aa14.82□□□□□ -0.04
CLIC4-202ENST00000488683 TTLL11Q8NHH1 800 aa14.82□□□□□ -0.04
CLIC4-202ENST00000488683 TRMT112Q9UI30 125 aaKnown RBP14.82□□□□□ -0.04
CLIC4-202ENST00000488683 CTDSPL2Q05D32 466 aa14.81□□□□□ -0.04
CLIC4-202ENST00000488683 MICU3Q86XE3 530 aa14.81□□□□□ -0.04
CLIC4-202ENST00000488683 TDRD7Q8NHU6 1098 aaKnown RBP14.81□□□□□ -0.04
CLIC4-202ENST00000488683 C8orf76Q96K31 380 aa14.81□□□□□ -0.04
CLIC4-202ENST00000488683 PLA2G12BQ9BX93 195 aa14.81□□□□□ -0.04
CLIC4-202ENST00000488683 TRMT1Q9NXH9 659 aaKnown RBP14.81□□□□□ -0.04
CLIC4-202ENST00000488683 AKAP2Q9Y2D5 859 aa14.81□□□□□ -0.04
CLIC4-202ENST00000488683 RIPOR2Q9Y4F9 1068 aa14.81□□□□□ -0.04
CLIC4-202ENST00000488683 ZNF213O14771 459 aa14.81□□□□□ -0.04
CLIC4-202ENST00000488683 SPECC1Q5M775 1068 aa14.81□□□□□ -0.04
CLIC4-202ENST00000488683 CCDC73Q6ZRK6 1079 aa14.81□□□□□ -0.04
CLIC4-202ENST00000488683 TICAM2Q86XR7 235 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms