RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 PDRG1Q9NUG6 133 aa24.15■■□□□ 1.46
NECAB3-213ENST00000488489 ZNF532Q9HCE3 1301 aa24.15■■□□□ 1.46
NECAB3-213ENST00000488489 DOCK2Q92608 1830 aa24.14■■□□□ 1.46
NECAB3-213ENST00000488489 PNPLA7Q6ZV29 1317 aa24.14■■□□□ 1.45
NECAB3-213ENST00000488489 GPAA1O43292 621 aa24.13■■□□□ 1.45
NECAB3-213ENST00000488489 PSMA5P28066 241 aa24.13■■□□□ 1.45
NECAB3-213ENST00000488489 NLGN1Q8N2Q7 840 aa24.13■■□□□ 1.45
NECAB3-213ENST00000488489 RPGRQ92834 1020 aaKnown RBP24.13■■□□□ 1.45
NECAB3-213ENST00000488489 COL1A1P02452 1464 aaPredicted RBP24.13■■□□□ 1.45
NECAB3-213ENST00000488489 CAVIN4Q5BKX8 364 aa24.13■■□□□ 1.45
NECAB3-213ENST00000488489 TTLL5Q6EMB2 1281 aa24.12■■□□□ 1.45
NECAB3-213ENST00000488489 FBXO33Q7Z6M2 555 aa24.12■■□□□ 1.45
NECAB3-213ENST00000488489 RGPD3A6NKT7 1758 aaPredicted RBP24.12■■□□□ 1.45
NECAB3-213ENST00000488489 RGPD4Q7Z3J3 1758 aa24.12■■□□□ 1.45
NECAB3-213ENST00000488489 EZH2Q15910 746 aaKnown RBP24.11■■□□□ 1.45
NECAB3-213ENST00000488489 BLOC1S2Q6QNY1 142 aa24.11■■□□□ 1.45
NECAB3-213ENST00000488489 STOX1Q6ZVD7 989 aa24.11■■□□□ 1.45
NECAB3-213ENST00000488489 TCEANC2Q96MN5 208 aa24.11■■□□□ 1.45
NECAB3-213ENST00000488489 LIMCH1Q9UPQ0 1083 aa24.11■■□□□ 1.45
NECAB3-213ENST00000488489 EN1Q05925 392 aaPredicted RBP24.11■■□□□ 1.45
NECAB3-213ENST00000488489 MAP3K12Q12852 859 aa24.11■■□□□ 1.45
NECAB3-213ENST00000488489 RAB3GAP1Q15042 981 aa24.11■■□□□ 1.45
NECAB3-213ENST00000488489 TXNRD3Q86VQ6 643 aa24.11■■□□□ 1.45
NECAB3-213ENST00000488489 VPS37DQ86XT2 251 aa24.11■■□□□ 1.45
NECAB3-213ENST00000488489 MAGEB6Q8N7X4 407 aa24.11■■□□□ 1.45
NECAB3-213ENST00000488489 FLAD1Q8NFF5 587 aa24.11■■□□□ 1.45
NECAB3-213ENST00000488489 GNL3LQ9NVN8 582 aaKnown RBP24.11■■□□□ 1.45
NECAB3-213ENST00000488489 KLRG2A4D1S0 409 aaPredicted RBP24.1■■□□□ 1.45
NECAB3-213ENST00000488489 RPS6KB1P23443 525 aa24.1■■□□□ 1.45
NECAB3-213ENST00000488489 KRT32Q14532 448 aa24.1■■□□□ 1.45
NECAB3-213ENST00000488489 CAMKK2Q96RR4 588 aa24.1■■□□□ 1.45
NECAB3-213ENST00000488489 IRS2Q9Y4H2 1338 aa24.1■■□□□ 1.45
NECAB3-213ENST00000488489 L1TD1Q5T7N2 865 aaKnown RBP24.1■■□□□ 1.45
NECAB3-213ENST00000488489 ANO8Q9HCE9 1232 aaPredicted RBP24.1■■□□□ 1.45
NECAB3-213ENST00000488489 CWC22Q9HCG8 908 aaKnown RBP24.1■■□□□ 1.45
NECAB3-213ENST00000488489 LARGE1O95461 756 aa24.09■■□□□ 1.45
NECAB3-213ENST00000488489 FGAP02671 866 aa24.09■■□□□ 1.45
NECAB3-213ENST00000488489 INTS4Q96HW7 963 aaKnown RBP24.09■■□□□ 1.45
NECAB3-213ENST00000488489 NEK1Q96PY6 1258 aa24.09■■□□□ 1.45
NECAB3-213ENST00000488489 HOXA10P31260 410 aaPredicted RBP24.08■■□□□ 1.45
NECAB3-213ENST00000488489 PKP1Q13835 747 aa24.08■■□□□ 1.45
NECAB3-213ENST00000488489 TNPO1Q92973 898 aaKnown RBP24.08■■□□□ 1.45
NECAB3-213ENST00000488489 ANKIB1Q9P2G1 1089 aa24.08■■□□□ 1.45
NECAB3-213ENST00000488489 MCM4P33991 863 aa24.08■■□□□ 1.45
NECAB3-213ENST00000488489 HIBADHP31937 336 aaKnown RBP24.07■■□□□ 1.44
NECAB3-213ENST00000488489 ANKRD31Q8N7Z5 1873 aa24.07■■□□□ 1.44
NECAB3-213ENST00000488489 RBM17Q96I25 401 aaKnown RBP24.07■■□□□ 1.44
NECAB3-213ENST00000488489 LRP2BPQ9P2M1 347 aa24.07■■□□□ 1.44
NECAB3-213ENST00000488489 MMP10P09238 476 aa24.07■■□□□ 1.44
NECAB3-213ENST00000488489 MSL1Q68DK7 614 aa24.07■■□□□ 1.44
NECAB3-213ENST00000488489 FAM43AQ8N2R8 423 aa24.07■■□□□ 1.44
NECAB3-213ENST00000488489 ABCF2Q9UG63 623 aa24.07■■□□□ 1.44
NECAB3-213ENST00000488489 STRBPQ96SI9 672 aaKnown RBP24.06■■□□□ 1.44
NECAB3-213ENST00000488489 ALDH8A1Q9H2A2 487 aaPredicted RBP24.06■■□□□ 1.44
NECAB3-213ENST00000488489 DENND2AQ9ULE3 1009 aa24.06■■□□□ 1.44
NECAB3-213ENST00000488489 NRXN2Q9P2S2 1712 aa24.06■■□□□ 1.44
NECAB3-213ENST00000488489 TOB2Q14106 344 aaPredicted RBP24.05■■□□□ 1.44
NECAB3-213ENST00000488489 TPCN1Q9ULQ1 816 aa24.05■■□□□ 1.44
NECAB3-213ENST00000488489 XDHP47989 1333 aa24.05■■□□□ 1.44
NECAB3-213ENST00000488489 LAMA4Q16363 1823 aa24.05■■□□□ 1.44
NECAB3-213ENST00000488489 E7EWF7 191 aa24.05■■□□□ 1.44
NECAB3-213ENST00000488489 BRIP1Q9BX63 1249 aa24.05■■□□□ 1.44
NECAB3-213ENST00000488489 CTNNA3Q9UI47 895 aa24.05■■□□□ 1.44
NECAB3-213ENST00000488489 LEMD3Q9Y2U8 911 aa24.05■■□□□ 1.44
NECAB3-213ENST00000488489 HAND2P61296 217 aa24.04■■□□□ 1.44
NECAB3-213ENST00000488489 GPSM2P81274 684 aa24.04■■□□□ 1.44
NECAB3-213ENST00000488489 ME3Q16798 604 aa24.04■■□□□ 1.44
NECAB3-213ENST00000488489 AIDAQ96BJ3 306 aa24.04■■□□□ 1.44
NECAB3-213ENST00000488489 SEMA3EO15041 775 aa24.04■■□□□ 1.44
NECAB3-213ENST00000488489 SLC15A2Q16348 729 aa24.04■■□□□ 1.44
NECAB3-213ENST00000488489 CRAMP1Q96RY5 1269 aa24.04■■□□□ 1.44
NECAB3-213ENST00000488489 BBOX1O75936 387 aa24.03■■□□□ 1.44
NECAB3-213ENST00000488489 MBD4O95243 580 aa24.03■■□□□ 1.44
NECAB3-213ENST00000488489 ADGRA1Q86SQ6 560 aa24.03■■□□□ 1.44
NECAB3-213ENST00000488489 GPR101Q96P66 508 aaPredicted RBP24.03■■□□□ 1.44
NECAB3-213ENST00000488489 ST3GAL1Q11201 340 aa24.02■■□□□ 1.44
NECAB3-213ENST00000488489 ARMT1Q9H993 441 aa24.02■■□□□ 1.44
NECAB3-213ENST00000488489 NSFL1CQ9UNZ2 370 aaKnown RBP24.02■■□□□ 1.44
NECAB3-213ENST00000488489 ZDHHC9Q9Y397 364 aa24.02■■□□□ 1.44
NECAB3-213ENST00000488489 GOLGB1Q14789 3259 aaKnown RBP24.02■■□□□ 1.44
NECAB3-213ENST00000488489 IMMTQ16891 758 aaKnown RBP24.02■■□□□ 1.44
NECAB3-213ENST00000488489 ZNF384Q8TF68 577 aa24.02■■□□□ 1.44
NECAB3-213ENST00000488489 ZSCAN31Q96LW9 406 aaPredicted RBP24.02■■□□□ 1.44
NECAB3-213ENST00000488489 RAI14Q9P0K7 980 aa24.02■■□□□ 1.44
NECAB3-213ENST00000488489 NUCB2P80303 420 aa24.01■■□□□ 1.43
NECAB3-213ENST00000488489 PARP3Q9Y6F1 533 aa24.01■■□□□ 1.43
NECAB3-213ENST00000488489 MYH13Q9UKX3 1938 aa24.01■■□□□ 1.43
NECAB3-213ENST00000488489 CACNA1SQ13698 1873 aa24.01■■□□□ 1.43
NECAB3-213ENST00000488489 APPP05067 770 aa24.01■■□□□ 1.43
NECAB3-213ENST00000488489 SRGNP10124 158 aa24.01■■□□□ 1.43
NECAB3-213ENST00000488489 MIGA1Q8NAN2 632 aa24.01■■□□□ 1.43
NECAB3-213ENST00000488489 LRRC2Q9BYS8 371 aa24.01■■□□□ 1.43
NECAB3-213ENST00000488489 SH2B1Q9NRF2 756 aaPredicted RBP24.01■■□□□ 1.43
NECAB3-213ENST00000488489 PDS5AQ29RF7 1337 aaKnown RBP24■■□□□ 1.43
NECAB3-213ENST00000488489 CYP7A1P22680 504 aa24■■□□□ 1.43
NECAB3-213ENST00000488489 EXOSC10Q01780 885 aaKnown RBP24■■□□□ 1.43
NECAB3-213ENST00000488489 ANKRD1Q15327 319 aa24■■□□□ 1.43
NECAB3-213ENST00000488489 Q6ZUG5 572 aa24■■□□□ 1.43
NECAB3-213ENST00000488489 DHX32Q7L7V1 743 aaKnown RBP24■■□□□ 1.43
NECAB3-213ENST00000488489 CCDC83Q8IWF9 413 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms