RNA–Protein interactions for RNA: ENST00000488255.1

VPS8-224, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-224ENST00000488255 TREHO43280 583 aa8.68□□□□□ -1.02
VPS8-224ENST00000488255 NOS3P29474 1203 aa8.68□□□□□ -1.02
VPS8-224ENST00000488255 GRIA4P48058 902 aa8.68□□□□□ -1.02
VPS8-224ENST00000488255 ARL4DP49703 201 aa8.68□□□□□ -1.02
VPS8-224ENST00000488255 PIP4K2BP78356 416 aa8.68□□□□□ -1.02
VPS8-224ENST00000488255 ACAD11Q709F0 780 aa8.68□□□□□ -1.02
VPS8-224ENST00000488255 CCNJLQ8IV13 435 aa8.68□□□□□ -1.02
VPS8-224ENST00000488255 KLHL23Q8NBE8 558 aa8.68□□□□□ -1.02
VPS8-224ENST00000488255 TCF12Q99081 682 aa8.68□□□□□ -1.02
VPS8-224ENST00000488255 MRPL18Q9H0U6 180 aaKnown RBP8.68□□□□□ -1.02
VPS8-224ENST00000488255 TPSG1Q9NRR2 321 aa8.68□□□□□ -1.02
VPS8-224ENST00000488255 SOX1O00570 391 aaPredicted RBP8.67□□□□□ -1.02
VPS8-224ENST00000488255 WISP1O95388 367 aa8.67□□□□□ -1.02
VPS8-224ENST00000488255 C19orf57Q0VDD7 668 aa8.67□□□□□ -1.02
VPS8-224ENST00000488255 DSC3Q14574 896 aa8.67□□□□□ -1.02
VPS8-224ENST00000488255 DUOXA2Q1HG44 320 aa8.67□□□□□ -1.02
VPS8-224ENST00000488255 KIAA0319Q5VV43 1072 aa8.67□□□□□ -1.02
VPS8-224ENST00000488255 SND1Q7KZF4 910 aaKnown RBP eCLIP8.67□□□□□ -1.02
VPS8-224ENST00000488255 DCAF11Q8TEB1 546 aa8.67□□□□□ -1.02
VPS8-224ENST00000488255 UBASH3BQ8TF42 649 aa8.67□□□□□ -1.02
VPS8-224ENST00000488255 ASB16Q96NS5 453 aa8.67□□□□□ -1.02
VPS8-224ENST00000488255 AKTIPQ9H8T0 292 aa8.67□□□□□ -1.02
VPS8-224ENST00000488255 NLRP2Q9NX02 1062 aa8.67□□□□□ -1.02
VPS8-224ENST00000488255 ADAM11O75078 769 aa8.66□□□□□ -1.02
VPS8-224ENST00000488255 SUZ12Q15022 739 aaKnown RBP8.66□□□□□ -1.02
VPS8-224ENST00000488255 SETDB2Q96T68 719 aa8.66□□□□□ -1.02
VPS8-224ENST00000488255 GZF1Q9H116 711 aaPredicted RBP8.66□□□□□ -1.02
VPS8-224ENST00000488255 F8W735 103 aaPredicted RBP8.65□□□□□ -1.02
VPS8-224ENST00000488255 ESRRAP11474 423 aaPredicted RBP8.65□□□□□ -1.02
VPS8-224ENST00000488255 GLB1P16278 677 aa8.65□□□□□ -1.02
VPS8-224ENST00000488255 FOXD4L4Q8WXT5 416 aaPredicted RBP8.65□□□□□ -1.02
VPS8-224ENST00000488255 OSGEPQ9NPF4 335 aa8.65□□□□□ -1.02
VPS8-224ENST00000488255 WWC3Q9ULE0 1092 aa8.65□□□□□ -1.02
VPS8-224ENST00000488255 GSTM4Q03013 218 aa8.64□□□□□ -1.03
VPS8-224ENST00000488255 PCDH1Q08174 1060 aa8.64□□□□□ -1.03
VPS8-224ENST00000488255 GRM2Q14416 872 aa8.64□□□□□ -1.03
VPS8-224ENST00000488255 ENOX2Q16206 610 aaKnown RBP8.64□□□□□ -1.03
VPS8-224ENST00000488255 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.64□□□□□ -1.03
VPS8-224ENST00000488255 TP53INP1Q96A56 240 aa8.64□□□□□ -1.03
VPS8-224ENST00000488255 MEGF10Q96KG7 1140 aa8.64□□□□□ -1.03
VPS8-224ENST00000488255 USP26Q9BXU7 913 aa8.64□□□□□ -1.03
VPS8-224ENST00000488255 TM4SF5O14894 197 aa8.63□□□□□ -1.03
VPS8-224ENST00000488255 WNT8BQ93098 351 aa8.63□□□□□ -1.03
VPS8-224ENST00000488255 CLEC4MQ9H2X3 399 aaPredicted RBP8.63□□□□□ -1.03
VPS8-224ENST00000488255 ZNF157P51786 506 aaPredicted RBP8.62□□□□□ -1.03
VPS8-224ENST00000488255 FCGRTP55899 365 aa8.62□□□□□ -1.03
VPS8-224ENST00000488255 ZNF423Q2M1K9 1284 aa8.62□□□□□ -1.03
VPS8-224ENST00000488255 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.62□□□□□ -1.03
VPS8-224ENST00000488255 TMEM130Q8N3G9 435 aa8.62□□□□□ -1.03
VPS8-224ENST00000488255 BCO2Q9BYV7 579 aa8.62□□□□□ -1.03
VPS8-224ENST00000488255 SEMA6BQ9H3T3 888 aa8.62□□□□□ -1.03
VPS8-224ENST00000488255 ABCB6Q9NP58 842 aa8.62□□□□□ -1.03
VPS8-224ENST00000488255 TMEM238LA0A1B0GVL6 79 aa8.61□□□□□ -1.03
VPS8-224ENST00000488255 P4HBP07237 508 aaKnown RBP8.61□□□□□ -1.03
VPS8-224ENST00000488255 ATP2B2Q01814 1243 aa8.61□□□□□ -1.03
VPS8-224ENST00000488255 FMR1Q06787 632 aaKnown RBP eCLIP8.61□□□□□ -1.03
VPS8-224ENST00000488255 NXPE4Q6UWF7 544 aa8.61□□□□□ -1.03
VPS8-224ENST00000488255 KIAA1211Q6ZU35 1233 aa8.61□□□□□ -1.03
VPS8-224ENST00000488255 TRAK1Q9UPV9 953 aa8.61□□□□□ -1.03
VPS8-224ENST00000488255 ANKRD33BA6NCL7 494 aa8.6□□□□□ -1.03
VPS8-224ENST00000488255 K7ELQ4 463 aaPredicted RBP8.6□□□□□ -1.03
VPS8-224ENST00000488255 DTHD1Q6ZMT9 781 aa8.6□□□□□ -1.03
VPS8-224ENST00000488255 RUSC1Q9BVN2 902 aa8.6□□□□□ -1.03
VPS8-224ENST00000488255 ZNF576Q9H609 170 aa8.6□□□□□ -1.03
VPS8-224ENST00000488255 PPP4R2Q9NY27 417 aa8.6□□□□□ -1.03
VPS8-224ENST00000488255 RSPO4Q2I0M5 234 aaPredicted RBP8.59□□□□□ -1.03
VPS8-224ENST00000488255 HOMEZQ8IX15 550 aa8.59□□□□□ -1.03
VPS8-224ENST00000488255 GLIS3Q8NEA6 775 aa8.59□□□□□ -1.03
VPS8-224ENST00000488255 AKAP2Q9Y2D5 859 aa8.59□□□□□ -1.03
VPS8-224ENST00000488255 LDHBP07195 334 aaKnown RBP8.58□□□□□ -1.04
VPS8-224ENST00000488255 ITPKAP23677 461 aa8.58□□□□□ -1.04
VPS8-224ENST00000488255 PRPF40BQ6NWY9 871 aaKnown RBP8.58□□□□□ -1.04
VPS8-224ENST00000488255 NKAPLQ5M9Q1 402 aa8.57□□□□□ -1.04
VPS8-224ENST00000488255 ALG1LQ6GMV1 187 aa8.57□□□□□ -1.04
VPS8-224ENST00000488255 UBL7Q96S82 380 aaPredicted RBP8.57□□□□□ -1.04
VPS8-224ENST00000488255 SSBP4Q9BWG4 385 aaPredicted RBP8.57□□□□□ -1.04
VPS8-224ENST00000488255 SOX17Q9H6I2 414 aaPredicted RBP8.57□□□□□ -1.04
VPS8-224ENST00000488255 GPN3Q9UHW5 284 aaPredicted RBP8.57□□□□□ -1.04
VPS8-224ENST00000488255 LOC100289279A0A1B0GTE1 492 aa8.56□□□□□ -1.04
VPS8-224ENST00000488255 SART1O43290 800 aaKnown RBP8.56□□□□□ -1.04
VPS8-224ENST00000488255 ADAM23O75077 832 aa8.56□□□□□ -1.04
VPS8-224ENST00000488255 CEP41Q9BYV8 373 aa8.56□□□□□ -1.04
VPS8-224ENST00000488255 RNF208Q9H0X6 261 aa8.56□□□□□ -1.04
VPS8-224ENST00000488255 DYRK3O43781 588 aa8.55□□□□□ -1.04
VPS8-224ENST00000488255 DLGAP3O95886 979 aa8.55□□□□□ -1.04
VPS8-224ENST00000488255 B3GALT4O96024 378 aa8.55□□□□□ -1.04
VPS8-224ENST00000488255 MAOBP27338 520 aa8.55□□□□□ -1.04
VPS8-224ENST00000488255 FAAP100Q0VG06 881 aa8.55□□□□□ -1.04
VPS8-224ENST00000488255 POU4F3Q15319 338 aa8.55□□□□□ -1.04
VPS8-224ENST00000488255 CCDC27Q2M243 656 aa8.55□□□□□ -1.04
VPS8-224ENST00000488255 FDX2Q6P4F2 183 aa8.55□□□□□ -1.04
VPS8-224ENST00000488255 DZIP1LQ8IYY4 767 aaKnown RBP8.55□□□□□ -1.04
VPS8-224ENST00000488255 C12orf50Q8NA57 414 aaPredicted RBP8.55□□□□□ -1.04
VPS8-224ENST00000488255 DDX54Q8TDD1 881 aaKnown RBP8.55□□□□□ -1.04
VPS8-224ENST00000488255 FBF1Q8TES7 1133 aa8.55□□□□□ -1.04
VPS8-224ENST00000488255 ECEL1O95672 775 aa8.54□□□□□ -1.04
VPS8-224ENST00000488255 EAPPQ56P03 285 aaPredicted RBP8.54□□□□□ -1.04
VPS8-224ENST00000488255 NUTM2GQ5VZR2 741 aa8.54□□□□□ -1.04
VPS8-224ENST00000488255 CORO1BQ9BR76 489 aa8.54□□□□□ -1.04
VPS8-224ENST00000488255 OSBPL7Q9BZF2 842 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms