RNA–Protein interactions for RNA: ENST00000488128.6

COL16A1-214, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 2,854 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-214ENST00000488128 SERPINC1P01008 464 aa16.45■□□□□ 0.22
COL16A1-214ENST00000488128 FANCCQ00597 558 aa16.45■□□□□ 0.22
COL16A1-214ENST00000488128 STK11IPQ8N1F8 1099 aa16.45■□□□□ 0.22
COL16A1-214ENST00000488128 CABLES1Q8TDN4 633 aa16.45■□□□□ 0.22
COL16A1-214ENST00000488128 PFKFB2O60825 505 aa16.45■□□□□ 0.22
COL16A1-214ENST00000488128 ARGLU1Q9NWB6 273 aaPredicted RBP16.45■□□□□ 0.22
COL16A1-214ENST00000488128 CACNA1FO60840 1977 aa16.44■□□□□ 0.22
COL16A1-214ENST00000488128 ZRANB2O95218 330 aaKnown RBP eCLIP16.44■□□□□ 0.22
COL16A1-214ENST00000488128 HAND2P61296 217 aa16.44■□□□□ 0.22
COL16A1-214ENST00000488128 PDILTQ8N807 584 aa16.44■□□□□ 0.22
COL16A1-214ENST00000488128 CCDC150Q8NCX0 1101 aa16.44■□□□□ 0.22
COL16A1-214ENST00000488128 LCMT1Q9UIC8 334 aa16.44■□□□□ 0.22
COL16A1-214ENST00000488128 ZNF609O15014 1411 aa16.44■□□□□ 0.22
COL16A1-214ENST00000488128 TULP2O00295 520 aa16.44■□□□□ 0.22
COL16A1-214ENST00000488128 TRIM65Q6PJ69 517 aa16.44■□□□□ 0.22
COL16A1-214ENST00000488128 DHX32Q7L7V1 743 aaKnown RBP16.44■□□□□ 0.22
COL16A1-214ENST00000488128 C10orf67Q8IYJ2 551 aa16.44■□□□□ 0.22
COL16A1-214ENST00000488128 NEUROD6Q96NK8 337 aa16.44■□□□□ 0.22
COL16A1-214ENST00000488128 FEZ2Q9UHY8 353 aaPredicted RBP16.44■□□□□ 0.22
COL16A1-214ENST00000488128 ZNF202O95125 648 aa16.44■□□□□ 0.22
COL16A1-214ENST00000488128 IGKV5-2P06315 115 aa16.44■□□□□ 0.22
COL16A1-214ENST00000488128 NCAPHQ15003 741 aa16.44■□□□□ 0.22
COL16A1-214ENST00000488128 TSGA10IPQ3SY00 556 aa16.44■□□□□ 0.22
COL16A1-214ENST00000488128 USPL1Q5W0Q7 1092 aa16.44■□□□□ 0.22
COL16A1-214ENST00000488128 WDR24Q96S15 920 aa16.44■□□□□ 0.22
COL16A1-214ENST00000488128 ALDH8A1Q9H2A2 487 aaPredicted RBP16.44■□□□□ 0.22
COL16A1-214ENST00000488128 IMPACTQ9P2X3 320 aa16.44■□□□□ 0.22
COL16A1-214ENST00000488128 MED1Q15648 1581 aaPredicted RBP16.43■□□□□ 0.22
COL16A1-214ENST00000488128 GOLIM4O00461 696 aa16.43■□□□□ 0.22
COL16A1-214ENST00000488128 NRDCO43847 1150 aa16.43■□□□□ 0.22
COL16A1-214ENST00000488128 UBASH3AP57075 661 aa16.43■□□□□ 0.22
COL16A1-214ENST00000488128 MCMDC2Q4G0Z9 681 aa16.43■□□□□ 0.22
COL16A1-214ENST00000488128 NAA16Q6N069 864 aaPredicted RBP16.43■□□□□ 0.22
COL16A1-214ENST00000488128 NFATC2IPQ8NCF5 419 aa16.43■□□□□ 0.22
COL16A1-214ENST00000488128 PSDA5PKW4 1024 aaPredicted RBP16.43■□□□□ 0.22
COL16A1-214ENST00000488128 FDPSP14324 419 aaKnown RBP16.43■□□□□ 0.22
COL16A1-214ENST00000488128 GNG11P61952 73 aa16.43■□□□□ 0.22
COL16A1-214ENST00000488128 LINS1Q8NG48 757 aa16.43■□□□□ 0.22
COL16A1-214ENST00000488128 U3KPZ7 1027 aaPredicted RBP16.43■□□□□ 0.22
COL16A1-214ENST00000488128 USP54Q70EL1 1684 aa16.43■□□□□ 0.22
COL16A1-214ENST00000488128 TADA3O75528 432 aa16.42■□□□□ 0.22
COL16A1-214ENST00000488128 PDIA3P30101 505 aaKnown RBP16.42■□□□□ 0.22
COL16A1-214ENST00000488128 SMC1AQ14683 1233 aaKnown RBP16.42■□□□□ 0.22
COL16A1-214ENST00000488128 MYD88Q99836 296 aa16.42■□□□□ 0.22
COL16A1-214ENST00000488128 IRX2Q9BZI1 471 aaPredicted RBP16.42■□□□□ 0.22
COL16A1-214ENST00000488128 SNRKQ9NRH2 765 aa16.42■□□□□ 0.22
COL16A1-214ENST00000488128 CRYBG1Q9Y4K1 1723 aa16.42■□□□□ 0.22
COL16A1-214ENST00000488128 TBC1D8O95759 1140 aa16.42■□□□□ 0.22
COL16A1-214ENST00000488128 ADALQ6DHV7 355 aa16.42■□□□□ 0.22
COL16A1-214ENST00000488128 LINC00301Q8NCQ3 95 aa16.42■□□□□ 0.22
COL16A1-214ENST00000488128 RAPGEF4Q8WZA2 1011 aa16.42■□□□□ 0.22
COL16A1-214ENST00000488128 DESI2Q9BSY9 194 aa16.42■□□□□ 0.22
COL16A1-214ENST00000488128 PARP3Q9Y6F1 533 aa16.42■□□□□ 0.22
COL16A1-214ENST00000488128 TNNT3P45378 269 aaPredicted RBP16.41■□□□□ 0.22
COL16A1-214ENST00000488128 LMAN1P49257 510 aa16.41■□□□□ 0.22
COL16A1-214ENST00000488128 CHRNA2Q15822 529 aa16.41■□□□□ 0.22
COL16A1-214ENST00000488128 ATP5J2-PTCD1G3V325 749 aa16.41■□□□□ 0.22
COL16A1-214ENST00000488128 PTCD1O75127 700 aaKnown RBP16.41■□□□□ 0.22
COL16A1-214ENST00000488128 CSB-PGBD3P0DP91 1061 aa16.41■□□□□ 0.22
COL16A1-214ENST00000488128 KARSQ15046 597 aaKnown RBP16.41■□□□□ 0.22
COL16A1-214ENST00000488128 PDIA6Q15084 440 aa16.41■□□□□ 0.22
COL16A1-214ENST00000488128 HSP90AB3PQ58FF7 597 aa16.41■□□□□ 0.22
COL16A1-214ENST00000488128 TNNI3KQ59H18 835 aa16.41■□□□□ 0.22
COL16A1-214ENST00000488128 FPGT-TNNI3KV9GXZ4 949 aa16.41■□□□□ 0.22
COL16A1-214ENST00000488128 SPTLC2O15270 562 aa16.4■□□□□ 0.22
COL16A1-214ENST00000488128 TPM4P67936 248 aa16.4■□□□□ 0.22
COL16A1-214ENST00000488128 CCDC191Q8NCU4 936 aa16.4■□□□□ 0.22
COL16A1-214ENST00000488128 CARMIL3Q8ND23 1372 aa16.4■□□□□ 0.22
COL16A1-214ENST00000488128 E7EWF7 191 aa16.4■□□□□ 0.22
COL16A1-214ENST00000488128 ADKP55263 362 aaKnown RBP16.4■□□□□ 0.22
COL16A1-214ENST00000488128 TIMM10P62072 90 aa16.4■□□□□ 0.22
COL16A1-214ENST00000488128 PNOCQ13519 176 aa16.4■□□□□ 0.22
COL16A1-214ENST00000488128 ZNF790Q6PG37 636 aa16.4■□□□□ 0.22
COL16A1-214ENST00000488128 AIFM3Q96NN9 605 aa16.4■□□□□ 0.22
COL16A1-214ENST00000488128 HSD3B7Q9H2F3 369 aa16.4■□□□□ 0.22
COL16A1-214ENST00000488128 NEDD4P46934 1319 aa16.4■□□□□ 0.22
COL16A1-214ENST00000488128 PFKFB1P16118 471 aa16.4■□□□□ 0.22
COL16A1-214ENST00000488128 CC2D1AQ6P1N0 951 aaPredicted RBP16.4■□□□□ 0.22
COL16A1-214ENST00000488128 UBE3BQ7Z3V4 1068 aa16.4■□□□□ 0.22
COL16A1-214ENST00000488128 REXO1L1PQ8IX06 675 aa16.4■□□□□ 0.22
COL16A1-214ENST00000488128 KIF28PB7ZC32 967 aa16.39■□□□□ 0.21
COL16A1-214ENST00000488128 ZSCAN26Q16670 478 aa16.39■□□□□ 0.21
COL16A1-214ENST00000488128 SKIDA1Q1XH10 827 aa16.39■□□□□ 0.21
COL16A1-214ENST00000488128 SPECC1Q5M775 1068 aa16.39■□□□□ 0.21
COL16A1-214ENST00000488128 C8orf76Q96K31 380 aa16.39■□□□□ 0.21
COL16A1-214ENST00000488128 DDX21Q9NR30 783 aaKnown RBP eCLIP16.39■□□□□ 0.21
COL16A1-214ENST00000488128 FANCLQ9NW38 375 aa16.39■□□□□ 0.21
COL16A1-214ENST00000488128 TFRCP02786 760 aaKnown RBP16.39■□□□□ 0.21
COL16A1-214ENST00000488128 RXRAP19793 462 aa16.39■□□□□ 0.21
COL16A1-214ENST00000488128 MCM6Q14566 821 aa16.39■□□□□ 0.21
COL16A1-214ENST00000488128 IPO4Q8TEX9 1081 aaKnown RBP16.39■□□□□ 0.21
COL16A1-214ENST00000488128 XAGE3Q8WTP9 111 aa16.39■□□□□ 0.21
COL16A1-214ENST00000488128 LLPHQ9BRT6 129 aaKnown RBP16.39■□□□□ 0.21
COL16A1-214ENST00000488128 RSPH14Q9UHP6 348 aa16.39■□□□□ 0.21
COL16A1-214ENST00000488128 VWA3AA6NCI4 1184 aa16.38■□□□□ 0.21
COL16A1-214ENST00000488128 ANKRD65E5RJM6 399 aa16.38■□□□□ 0.21
COL16A1-214ENST00000488128 WDHD1O75717 1129 aaPredicted RBP16.38■□□□□ 0.21
COL16A1-214ENST00000488128 TOP1P11387 765 aaKnown RBP16.38■□□□□ 0.21
COL16A1-214ENST00000488128 ATP5JP18859 108 aa16.38■□□□□ 0.21
COL16A1-214ENST00000488128 NLRP12P59046 1061 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms