RNA–Protein interactions for RNA: ENST00000488053.1

TNFSF4-203, Transcript of TNF superfamily member 4, humanhuman

TSL 3

Gene TNFSF4, Length 520 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-203ENST00000488053 CASZ1Q86V15 1759 aa8.92□□□□□ -0.98
TNFSF4-203ENST00000488053 CD163L1Q9NR16 1453 aa8.92□□□□□ -0.98
TNFSF4-203ENST00000488053 EXOC5O00471 708 aa8.92□□□□□ -0.98
TNFSF4-203ENST00000488053 PLSCR1O15162 318 aa8.92□□□□□ -0.98
TNFSF4-203ENST00000488053 ZBTB7AO95365 584 aa8.92□□□□□ -0.98
TNFSF4-203ENST00000488053 RHOQP17081 205 aa8.92□□□□□ -0.98
TNFSF4-203ENST00000488053 PSMA6P60900 246 aaKnown RBP8.92□□□□□ -0.98
TNFSF4-203ENST00000488053 C4orf17Q53FE4 359 aa8.92□□□□□ -0.98
TNFSF4-203ENST00000488053 ACSBG1Q96GR2 724 aa8.92□□□□□ -0.98
TNFSF4-203ENST00000488053 TSPAN10Q9H1Z9 355 aaPredicted RBP8.92□□□□□ -0.98
TNFSF4-203ENST00000488053 NLRP2Q9NX02 1062 aa8.92□□□□□ -0.98
TNFSF4-203ENST00000488053 TNS2Q63HR2 1409 aa8.91□□□□□ -0.98
TNFSF4-203ENST00000488053 CCDC7Q96M83 1385 aa8.91□□□□□ -0.98
TNFSF4-203ENST00000488053 SBNO2Q9Y2G9 1366 aa8.91□□□□□ -0.98
TNFSF4-203ENST00000488053 PTSQ03393 145 aa8.91□□□□□ -0.98
TNFSF4-203ENST00000488053 TXNRD1Q16881 649 aa8.91□□□□□ -0.98
TNFSF4-203ENST00000488053 HDGFL2Q7Z4V5 671 aaPredicted RBP8.91□□□□□ -0.98
TNFSF4-203ENST00000488053 ZNF295-AS1Q8N0V1 137 aa8.91□□□□□ -0.98
TNFSF4-203ENST00000488053 SCG3Q8WXD2 468 aaKnown RBP8.91□□□□□ -0.98
TNFSF4-203ENST00000488053 CLP1Q92989 425 aaKnown RBP8.91□□□□□ -0.98
TNFSF4-203ENST00000488053 SLC12A5Q9H2X9 1139 aa8.91□□□□□ -0.98
TNFSF4-203ENST00000488053 TIMMDC1Q9NPL8 285 aa8.91□□□□□ -0.98
TNFSF4-203ENST00000488053 USP3Q9Y6I4 520 aa8.91□□□□□ -0.98
TNFSF4-203ENST00000488053 A0A1W2PP64 1363 aa8.9□□□□□ -0.98
TNFSF4-203ENST00000488053 USP31Q70CQ4 1352 aa8.9□□□□□ -0.98
TNFSF4-203ENST00000488053 TONSLQ96HA7 1378 aa8.9□□□□□ -0.98
TNFSF4-203ENST00000488053 PPP1R12BO60237 982 aaPredicted RBP8.9□□□□□ -0.98
TNFSF4-203ENST00000488053 IGFBP4P22692 258 aa8.9□□□□□ -0.98
TNFSF4-203ENST00000488053 YY1P25490 414 aa8.9□□□□□ -0.98
TNFSF4-203ENST00000488053 PLA2G4AP47712 749 aa8.9□□□□□ -0.98
TNFSF4-203ENST00000488053 TEAD4Q15561 434 aa8.9□□□□□ -0.98
TNFSF4-203ENST00000488053 RETREG2Q8NC44 543 aa8.9□□□□□ -0.98
TNFSF4-203ENST00000488053 ANKRD24Q8TF21 1146 aa8.9□□□□□ -0.98
TNFSF4-203ENST00000488053 LTV1Q96GA3 475 aaPredicted RBP8.9□□□□□ -0.98
TNFSF4-203ENST00000488053 DYRK1BQ9Y463 629 aa8.9□□□□□ -0.98
TNFSF4-203ENST00000488053 MYOM1P52179 1685 aa8.9□□□□□ -0.98
TNFSF4-203ENST00000488053 NHSQ6T4R5 1651 aa8.9□□□□□ -0.98
TNFSF4-203ENST00000488053 USP54Q70EL1 1684 aa8.9□□□□□ -0.98
TNFSF4-203ENST00000488053 ABCC6O95255 1503 aa8.9□□□□□ -0.99
TNFSF4-203ENST00000488053 A0A1B0GTH6 734 aa8.89□□□□□ -0.99
TNFSF4-203ENST00000488053 SERTM1A2A2V5 107 aa8.89□□□□□ -0.99
TNFSF4-203ENST00000488053 TMEM88BA6NKF7 163 aa8.89□□□□□ -0.99
TNFSF4-203ENST00000488053 WEE1P30291 646 aa8.89□□□□□ -0.99
TNFSF4-203ENST00000488053 PHKA2P46019 1235 aa8.89□□□□□ -0.99
TNFSF4-203ENST00000488053 TBCELQ5QJ74 424 aa8.89□□□□□ -0.99
TNFSF4-203ENST00000488053 STAG2Q8N3U4 1231 aa8.89□□□□□ -0.99
TNFSF4-203ENST00000488053 STK32BQ9NY57 414 aa8.89□□□□□ -0.99
TNFSF4-203ENST00000488053 BTAF1O14981 1849 aa8.89□□□□□ -0.99
TNFSF4-203ENST00000488053 RGPD2P0DJD1 1756 aa8.89□□□□□ -0.99
TNFSF4-203ENST00000488053 BCL9O00512 1426 aa8.88□□□□□ -0.99
TNFSF4-203ENST00000488053 SENP3-EIF4A1A0A087X0R7 540 aa8.88□□□□□ -0.99
TNFSF4-203ENST00000488053 C21orf2O43822 256 aa8.88□□□□□ -0.99
TNFSF4-203ENST00000488053 IL2RBP14784 551 aa8.88□□□□□ -0.99
TNFSF4-203ENST00000488053 FBLN1P23142 703 aa8.88□□□□□ -0.99
TNFSF4-203ENST00000488053 SLC15A2Q16348 729 aa8.88□□□□□ -0.99
TNFSF4-203ENST00000488053 TERF2IPQ9NYB0 399 aa8.88□□□□□ -0.99
TNFSF4-203ENST00000488053 ZNF232Q9UNY5 417 aa8.88□□□□□ -0.99
TNFSF4-203ENST00000488053 EDC4Q6P2E9 1401 aaKnown RBP8.88□□□□□ -0.99
TNFSF4-203ENST00000488053 NINLQ9Y2I6 1382 aa8.87□□□□□ -0.99
TNFSF4-203ENST00000488053 SLC35F4A4IF30 521 aa8.87□□□□□ -0.99
TNFSF4-203ENST00000488053 PRMT3O60678 531 aa8.87□□□□□ -0.99
TNFSF4-203ENST00000488053 LGR5O75473 907 aa8.87□□□□□ -0.99
TNFSF4-203ENST00000488053 NOS2P35228 1153 aa8.87□□□□□ -0.99
TNFSF4-203ENST00000488053 HIRAP54198 1017 aaPredicted RBP8.87□□□□□ -0.99
TNFSF4-203ENST00000488053 C1orf216Q8TAB5 229 aa8.87□□□□□ -0.99
TNFSF4-203ENST00000488053 ST20-MTHFSA0A0A6YYL1 179 aa8.86□□□□□ -0.99
TNFSF4-203ENST00000488053 EML1O00423 815 aa8.86□□□□□ -0.99
TNFSF4-203ENST00000488053 ATP2B4P23634 1241 aa8.86□□□□□ -0.99
TNFSF4-203ENST00000488053 OCLNQ16625 522 aa8.86□□□□□ -0.99
TNFSF4-203ENST00000488053 CCDC155Q8N6L0 562 aa8.86□□□□□ -0.99
TNFSF4-203ENST00000488053 DDX54Q8TDD1 881 aaKnown RBP8.86□□□□□ -0.99
TNFSF4-203ENST00000488053 ZDHHC1Q8WTX9 485 aa8.86□□□□□ -0.99
TNFSF4-203ENST00000488053 PRIMPOLQ96LW4 560 aa8.86□□□□□ -0.99
TNFSF4-203ENST00000488053 C2orf49Q9BVC5 232 aaPredicted RBP8.86□□□□□ -0.99
TNFSF4-203ENST00000488053 ZDHHC3Q9NYG2 299 aa8.86□□□□□ -0.99
TNFSF4-203ENST00000488053 F11P03951 625 aa8.85□□□□□ -0.99
TNFSF4-203ENST00000488053 TATP17735 454 aaPredicted RBP8.85□□□□□ -0.99
TNFSF4-203ENST00000488053 ZNF827Q17R98 1081 aa8.85□□□□□ -0.99
TNFSF4-203ENST00000488053 B4GALNT3Q6L9W6 998 aa8.85□□□□□ -0.99
TNFSF4-203ENST00000488053 NPAS3Q8IXF0 933 aa8.85□□□□□ -0.99
TNFSF4-203ENST00000488053 IP6K1Q92551 441 aa8.85□□□□□ -0.99
TNFSF4-203ENST00000488053 VTI1AQ96AJ9 217 aa8.85□□□□□ -0.99
TNFSF4-203ENST00000488053 AIDAQ96BJ3 306 aa8.85□□□□□ -0.99
TNFSF4-203ENST00000488053 COG3Q96JB2 828 aa8.85□□□□□ -0.99
TNFSF4-203ENST00000488053 TESK2Q96S53 571 aa8.85□□□□□ -0.99
TNFSF4-203ENST00000488053 CXXC1Q9P0U4 656 aaPredicted RBP8.85□□□□□ -0.99
TNFSF4-203ENST00000488053 NXF1Q9UBU9 619 aaKnown RBP8.85□□□□□ -0.99
TNFSF4-203ENST00000488053 PARP3Q9Y6F1 533 aa8.85□□□□□ -0.99
TNFSF4-203ENST00000488053 FAM208AQ9UK61 1670 aaKnown RBP8.85□□□□□ -0.99
TNFSF4-203ENST00000488053 PAPPAQ13219 1627 aa8.84□□□□□ -0.99
TNFSF4-203ENST00000488053 KCNQ4P56696 695 aa8.84□□□□□ -0.99
TNFSF4-203ENST00000488053 SYTL4Q96C24 671 aaPredicted RBP8.84□□□□□ -0.99
TNFSF4-203ENST00000488053 GAS2L1Q99501 681 aaPredicted RBP8.84□□□□□ -0.99
TNFSF4-203ENST00000488053 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.84□□□□□ -0.99
TNFSF4-203ENST00000488053 LRRC4BQ9NT99 713 aa8.84□□□□□ -0.99
TNFSF4-203ENST00000488053 UTRNP46939 3433 aa8.84□□□□□ -0.99
TNFSF4-203ENST00000488053 MAP3K19Q56UN5 1328 aa8.83□□□□□ -1
TNFSF4-203ENST00000488053 DOT1LQ8TEK3 1739 aa8.83□□□□□ -1
TNFSF4-203ENST00000488053 SHANK3Q9BYB0 1731 aa8.83□□□□□ -1
TNFSF4-203ENST00000488053 PPFIA3O75145 1194 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms