RNA–Protein interactions for RNA: ENST00000487932.5

PKD1-220, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 6,464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-220ENST00000487932 CTAGE8P0CG41 777 aa17.32■□□□□ 0.36
PKD1-220ENST00000487932 CUL4BQ13620 913 aa17.32■□□□□ 0.36
PKD1-220ENST00000487932 EAPPQ56P03 285 aaPredicted RBP17.32■□□□□ 0.36
PKD1-220ENST00000487932 TPTE2Q6XPS3 522 aa17.32■□□□□ 0.36
PKD1-220ENST00000487932 CTAGE6Q86UF2 777 aa17.32■□□□□ 0.36
PKD1-220ENST00000487932 CTAGE4Q8IX94 777 aa17.32■□□□□ 0.36
PKD1-220ENST00000487932 LMBR1Q8WVP7 490 aa17.32■□□□□ 0.36
PKD1-220ENST00000487932 EPSTI1Q96J88 318 aa17.32■□□□□ 0.36
PKD1-220ENST00000487932 TRIM7Q9C029 511 aa17.32■□□□□ 0.36
PKD1-220ENST00000487932 MSH6P52701 1360 aa17.32■□□□□ 0.36
PKD1-220ENST00000487932 LDHBP07195 334 aaKnown RBP17.32■□□□□ 0.36
PKD1-220ENST00000487932 AOPEPQ8N6M6 819 aa17.32■□□□□ 0.36
PKD1-220ENST00000487932 CNPY2Q9Y2B0 182 aa17.32■□□□□ 0.36
PKD1-220ENST00000487932 GOLGA1Q92805 767 aa17.32■□□□□ 0.36
PKD1-220ENST00000487932 PRPF31Q8WWY3 499 aaKnown RBP17.32■□□□□ 0.36
PKD1-220ENST00000487932 ANO3Q9BYT9 981 aa17.32■□□□□ 0.36
PKD1-220ENST00000487932 GRIN2BQ13224 1484 aa17.32■□□□□ 0.36
PKD1-220ENST00000487932 DYNC1I1O14576 645 aa17.32■□□□□ 0.36
PKD1-220ENST00000487932 MKRN1Q9UHC7 482 aaKnown RBP17.32■□□□□ 0.36
PKD1-220ENST00000487932 FAM170AA1A519 330 aa17.31■□□□□ 0.36
PKD1-220ENST00000487932 NOP56O00567 594 aaKnown RBP17.31■□□□□ 0.36
PKD1-220ENST00000487932 MBIPQ9NS73 344 aa17.31■□□□□ 0.36
PKD1-220ENST00000487932 SLC8A3P57103 927 aa17.31■□□□□ 0.36
PKD1-220ENST00000487932 CAMSAP2Q08AD1 1489 aa17.31■□□□□ 0.36
PKD1-220ENST00000487932 WDR44Q5JSH3 913 aa17.31■□□□□ 0.36
PKD1-220ENST00000487932 CCDC129Q6ZRS4 1044 aa17.31■□□□□ 0.36
PKD1-220ENST00000487932 DNAI1Q9UI46 699 aa17.31■□□□□ 0.36
PKD1-220ENST00000487932 TRIM27P14373 513 aa17.31■□□□□ 0.36
PKD1-220ENST00000487932 TTLL3Q9Y4R7 772 aa17.31■□□□□ 0.36
PKD1-220ENST00000487932 MNAT1P51948 309 aa17.31■□□□□ 0.36
PKD1-220ENST00000487932 CASKIN1Q8WXD9 1431 aa17.31■□□□□ 0.36
PKD1-220ENST00000487932 IVNS1ABPQ9Y6Y0 642 aa17.31■□□□□ 0.36
PKD1-220ENST00000487932 MCMDC2Q4G0Z9 681 aa17.3■□□□□ 0.36
PKD1-220ENST00000487932 ZSCAN16Q9H4T2 348 aaPredicted RBP17.3■□□□□ 0.36
PKD1-220ENST00000487932 PTPDC1A2A3K4 754 aa17.3■□□□□ 0.36
PKD1-220ENST00000487932 LEO1Q8WVC0 666 aaPredicted RBP17.3■□□□□ 0.36
PKD1-220ENST00000487932 RBM17Q96I25 401 aaKnown RBP17.3■□□□□ 0.36
PKD1-220ENST00000487932 RSPH14Q9UHP6 348 aa17.3■□□□□ 0.36
PKD1-220ENST00000487932 GUCA1BQ9UMX6 200 aa17.3■□□□□ 0.36
PKD1-220ENST00000487932 KARSQ15046 597 aaKnown RBP17.3■□□□□ 0.36
PKD1-220ENST00000487932 FAM204AQ9H8W3 233 aa17.3■□□□□ 0.36
PKD1-220ENST00000487932 AFG3L2Q9Y4W6 797 aa17.3■□□□□ 0.36
PKD1-220ENST00000487932 HCLS1P14317 486 aaPredicted RBP17.3■□□□□ 0.36
PKD1-220ENST00000487932 EYA3Q99504 573 aa17.3■□□□□ 0.36
PKD1-220ENST00000487932 PA2G4Q9UQ80 394 aaKnown RBP17.3■□□□□ 0.36
PKD1-220ENST00000487932 UBE2HP62256 183 aa17.29■□□□□ 0.36
PKD1-220ENST00000487932 STMN4Q9H169 189 aaPredicted RBP17.29■□□□□ 0.36
PKD1-220ENST00000487932 STX10O60499 249 aa17.29■□□□□ 0.36
PKD1-220ENST00000487932 INF2Q27J81 1249 aa17.29■□□□□ 0.36
PKD1-220ENST00000487932 CADPS2Q86UW7 1296 aa17.29■□□□□ 0.36
PKD1-220ENST00000487932 RHPN1Q8TCX5 695 aa17.29■□□□□ 0.36
PKD1-220ENST00000487932 FRMD4BQ9Y2L6 1034 aa17.29■□□□□ 0.36
PKD1-220ENST00000487932 RBM8AQ9Y5S9 174 aaKnown RBP17.29■□□□□ 0.36
PKD1-220ENST00000487932 ACEP12821 1306 aa17.29■□□□□ 0.36
PKD1-220ENST00000487932 GNPATO15228 680 aa17.29■□□□□ 0.36
PKD1-220ENST00000487932 ZBTB24O43167 697 aaPredicted RBP17.29■□□□□ 0.36
PKD1-220ENST00000487932 HSPA1LP34931 641 aa17.29■□□□□ 0.36
PKD1-220ENST00000487932 CALCOCO1Q9P1Z2 691 aa17.29■□□□□ 0.36
PKD1-220ENST00000487932 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.29■□□□□ 0.367e-7■■□□□ 13
PKD1-220ENST00000487932 V9GYY5 206 aaPredicted RBP17.29■□□□□ 0.36
PKD1-220ENST00000487932 BMP15O95972 392 aa17.29■□□□□ 0.36
PKD1-220ENST00000487932 TRPC3Q13507 836 aa17.29■□□□□ 0.36
PKD1-220ENST00000487932 BRDTQ58F21 947 aaPredicted RBP17.28■□□□□ 0.36
PKD1-220ENST00000487932 PARP1P09874 1014 aaKnown RBP17.28■□□□□ 0.36
PKD1-220ENST00000487932 ANKS4BQ8N8V4 417 aa17.28■□□□□ 0.36
PKD1-220ENST00000487932 PAG1Q9NWQ8 432 aa17.28■□□□□ 0.36
PKD1-220ENST00000487932 KIF5AQ12840 1032 aa17.28■□□□□ 0.36
PKD1-220ENST00000487932 CCDC42Q96M95 316 aa17.28■□□□□ 0.36
PKD1-220ENST00000487932 TRIM75PA6NK02 468 aa17.28■□□□□ 0.36
PKD1-220ENST00000487932 CSPG5O95196 566 aa17.28■□□□□ 0.36
PKD1-220ENST00000487932 ZFYP08048 801 aaPredicted RBP17.28■□□□□ 0.36
PKD1-220ENST00000487932 IRS4O14654 1257 aaPredicted RBP17.28■□□□□ 0.36
PKD1-220ENST00000487932 PSMD6Q15008 389 aa17.28■□□□□ 0.36
PKD1-220ENST00000487932 NOP9Q86U38 636 aaKnown RBP17.28■□□□□ 0.36
PKD1-220ENST00000487932 KCNG4Q8TDN1 519 aa17.28■□□□□ 0.36
PKD1-220ENST00000487932 UBLCP1Q8WVY7 318 aaPredicted RBP17.28■□□□□ 0.36
PKD1-220ENST00000487932 CTAGE9A4FU28 777 aa17.28■□□□□ 0.36
PKD1-220ENST00000487932 NAA25Q14CX7 972 aa17.28■□□□□ 0.36
PKD1-220ENST00000487932 ERICH3Q5RHP9 1530 aa17.27■□□□□ 0.36
PKD1-220ENST00000487932 RIOK3O14730 519 aaKnown RBP17.27■□□□□ 0.36
PKD1-220ENST00000487932 VPS52Q8N1B4 723 aa17.27■□□□□ 0.36
PKD1-220ENST00000487932 RTL9Q8NET4 1388 aa17.27■□□□□ 0.36
PKD1-220ENST00000487932 FAM160A1Q05DH4 1040 aa17.27■□□□□ 0.36
PKD1-220ENST00000487932 LETM2Q2VYF4 491 aa17.27■□□□□ 0.36
PKD1-220ENST00000487932 TTC22Q5TAA0 569 aa17.27■□□□□ 0.36
PKD1-220ENST00000487932 KAT6BQ8WYB5 2073 aa17.27■□□□□ 0.36
PKD1-220ENST00000487932 ZEB2O60315 1214 aa17.27■□□□□ 0.36
PKD1-220ENST00000487932 ZSCAN22P10073 491 aaPredicted RBP17.27■□□□□ 0.36
PKD1-220ENST00000487932 GSDMBQ8TAX9 411 aa17.27■□□□□ 0.36
PKD1-220ENST00000487932 PPARDQ03181 441 aa17.27■□□□□ 0.35
PKD1-220ENST00000487932 DTHD1Q6ZMT9 781 aa17.27■□□□□ 0.35
PKD1-220ENST00000487932 TBC1D2Q9BYX2 928 aa17.27■□□□□ 0.35
PKD1-220ENST00000487932 PLCG2P16885 1265 aa17.27■□□□□ 0.35
PKD1-220ENST00000487932 SYT1P21579 422 aa17.27■□□□□ 0.35
PKD1-220ENST00000487932 SEL1L2Q5TEA6 688 aa17.27■□□□□ 0.35
PKD1-220ENST00000487932 LZTFL1Q9NQ48 299 aa17.27■□□□□ 0.35
PKD1-220ENST00000487932 POLA1P09884 1462 aaPredicted RBP17.26■□□□□ 0.35
PKD1-220ENST00000487932 TTC21BQ7Z4L5 1316 aa17.26■□□□□ 0.35
PKD1-220ENST00000487932 APOBRQ0VD83 1088 aa17.26■□□□□ 0.35
PKD1-220ENST00000487932 STRN3Q13033 797 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms