RNA–Protein interactions for RNA: ENST00000487656.1

MACF1-221, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 323 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-221ENST00000487656 RIC3Q7Z5B4 369 aa7.28□□□□□ -1.24
MACF1-221ENST00000487656 SLF2Q8IX21 1173 aa7.28□□□□□ -1.24
MACF1-221ENST00000487656 HHIPL1Q96JK4 782 aa7.28□□□□□ -1.24
MACF1-221ENST00000487656 THUMPD2Q9BTF0 503 aaKnown RBP7.28□□□□□ -1.24
MACF1-221ENST00000487656 RTFDC1Q9BY42 306 aaPredicted RBP7.28□□□□□ -1.24
MACF1-221ENST00000487656 ANKRD36CQ5JPF3 1778 aa7.28□□□□□ -1.24
MACF1-221ENST00000487656 POLR2AP24928 1970 aaKnown RBP7.28□□□□□ -1.24
MACF1-221ENST00000487656 CDHR2Q9BYE9 1310 aa7.27□□□□□ -1.24
MACF1-221ENST00000487656 LTBP1Q14766 1721 aa7.27□□□□□ -1.25
MACF1-221ENST00000487656 CCDC85CA6NKD9 419 aa7.27□□□□□ -1.25
MACF1-221ENST00000487656 H7C1D1 291 aa7.27□□□□□ -1.25
MACF1-221ENST00000487656 KDM4AO75164 1064 aa7.27□□□□□ -1.25
MACF1-221ENST00000487656 GMPSP49915 693 aaPredicted RBP7.27□□□□□ -1.25
MACF1-221ENST00000487656 RIPK4P57078 832 aa7.27□□□□□ -1.25
MACF1-221ENST00000487656 FMR1Q06787 632 aaKnown RBP eCLIP7.27□□□□□ -1.252e-7■■■■□ 21
MACF1-221ENST00000487656 LMOD3Q0VAK6 560 aa7.27□□□□□ -1.25
MACF1-221ENST00000487656 KIAA2012Q0VF49 1180 aa7.27□□□□□ -1.25
MACF1-221ENST00000487656 AIMP1Q12904 312 aaKnown RBP7.27□□□□□ -1.25
MACF1-221ENST00000487656 FLIIQ13045 1269 aa7.27□□□□□ -1.25
MACF1-221ENST00000487656 TCIRG1Q13488 830 aa7.27□□□□□ -1.25
MACF1-221ENST00000487656 LCE2DQ5TA82 110 aaPredicted RBP7.27□□□□□ -1.25
MACF1-221ENST00000487656 ANKRD13DQ6ZTN6 518 aa7.27□□□□□ -1.25
MACF1-221ENST00000487656 CDC37L1Q7L3B6 337 aa7.27□□□□□ -1.25
MACF1-221ENST00000487656 COPS6Q7L5N1 327 aa7.27□□□□□ -1.25
MACF1-221ENST00000487656 PGAP2Q9UHJ9 254 aa7.27□□□□□ -1.25
MACF1-221ENST00000487656 TRMT112Q9UI30 125 aaKnown RBP7.27□□□□□ -1.25
MACF1-221ENST00000487656 CNOT7Q9UIV1 285 aaKnown RBP7.27□□□□□ -1.25
MACF1-221ENST00000487656 COL4A5P29400 1685 aa7.27□□□□□ -1.25
MACF1-221ENST00000487656 CASP8AP2Q9UKL3 1982 aa7.27□□□□□ -1.25
MACF1-221ENST00000487656 ABCC4O15439 1325 aa7.27□□□□□ -1.25
MACF1-221ENST00000487656 SPTLC1O15269 473 aa7.26□□□□□ -1.25
MACF1-221ENST00000487656 AOC2O75106 756 aa7.26□□□□□ -1.25
MACF1-221ENST00000487656 RNF40O75150 1001 aa7.26□□□□□ -1.25
MACF1-221ENST00000487656 RAD17O75943 681 aa7.26□□□□□ -1.25
MACF1-221ENST00000487656 SLC10A3P09131 477 aa7.26□□□□□ -1.25
MACF1-221ENST00000487656 HCLS1P14317 486 aaPredicted RBP7.26□□□□□ -1.25
MACF1-221ENST00000487656 GCGRP47871 477 aa7.26□□□□□ -1.25
MACF1-221ENST00000487656 MLLT1Q03111 559 aaPredicted RBP7.26□□□□□ -1.25
MACF1-221ENST00000487656 SAPCD2Q86UD0 394 aa7.26□□□□□ -1.25
MACF1-221ENST00000487656 NLRP10Q86W26 655 aa7.26□□□□□ -1.25
MACF1-221ENST00000487656 ZFRQ96KR1 1074 aaKnown RBP7.26□□□□□ -1.25
MACF1-221ENST00000487656 GLIS2Q9BZE0 524 aaPredicted RBP7.26□□□□□ -1.25
MACF1-221ENST00000487656 TAF1P21675 1872 aa7.26□□□□□ -1.25
MACF1-221ENST00000487656 SH3TC1Q8TE82 1336 aa7.26□□□□□ -1.25
MACF1-221ENST00000487656 LAMB2P55268 1798 aa7.25□□□□□ -1.25
MACF1-221ENST00000487656 GOLGA8CPA6NN73 597 aa7.25□□□□□ -1.25
MACF1-221ENST00000487656 ANXA1P04083 346 aa7.25□□□□□ -1.25
MACF1-221ENST00000487656 USP46P62068 366 aa7.25□□□□□ -1.25
MACF1-221ENST00000487656 GRAPQ13588 217 aa7.25□□□□□ -1.25
MACF1-221ENST00000487656 WASHC4Q2M389 1173 aa7.25□□□□□ -1.25
MACF1-221ENST00000487656 LRP10Q7Z4F1 713 aa7.25□□□□□ -1.25
MACF1-221ENST00000487656 GRAPLQ8TC17 118 aaPredicted RBP7.25□□□□□ -1.25
MACF1-221ENST00000487656 XAGE3Q8WTP9 111 aa7.25□□□□□ -1.25
MACF1-221ENST00000487656 NECTIN2Q92692 538 aa7.25□□□□□ -1.25
MACF1-221ENST00000487656 DPF2Q92785 391 aa7.25□□□□□ -1.25
MACF1-221ENST00000487656 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.25□□□□□ -1.25
MACF1-221ENST00000487656 ZNF408Q9H9D4 720 aa7.25□□□□□ -1.25
MACF1-221ENST00000487656 LIMD1Q9UGP4 676 aa7.25□□□□□ -1.25
MACF1-221ENST00000487656 THSD7BQ9C0I4 1608 aa7.24□□□□□ -1.25
MACF1-221ENST00000487656 MOXD2PA6NHM9 499 aa7.24□□□□□ -1.25
MACF1-221ENST00000487656 GJA5P36382 358 aa7.24□□□□□ -1.25
MACF1-221ENST00000487656 TMPOP42166 694 aaKnown RBP7.24□□□□□ -1.25
MACF1-221ENST00000487656 RGS19P49795 217 aa7.24□□□□□ -1.25
MACF1-221ENST00000487656 HIRAP54198 1017 aaPredicted RBP7.24□□□□□ -1.25
MACF1-221ENST00000487656 NOGQ13253 232 aa7.24□□□□□ -1.25
MACF1-221ENST00000487656 PROSER3Q2NL68 480 aa7.24□□□□□ -1.25
MACF1-221ENST00000487656 TUSC1Q2TAM9 212 aa7.24□□□□□ -1.25
MACF1-221ENST00000487656 RSBN1LQ6PCB5 846 aaPredicted RBP7.24□□□□□ -1.25
MACF1-221ENST00000487656 USP48Q86UV5 1035 aa7.24□□□□□ -1.25
MACF1-221ENST00000487656 C2orf69Q8N8R5 385 aa7.24□□□□□ -1.25
MACF1-221ENST00000487656 PLBD2Q8NHP8 589 aa7.24□□□□□ -1.25
MACF1-221ENST00000487656 DCPSQ96C86 337 aaKnown RBP7.24□□□□□ -1.25
MACF1-221ENST00000487656 LRCH3Q96II8 777 aa7.24□□□□□ -1.25
MACF1-221ENST00000487656 NSFL1CQ9UNZ2 370 aaKnown RBP7.24□□□□□ -1.25
MACF1-221ENST00000487656 AKAP11Q9UKA4 1901 aa7.23□□□□□ -1.25
MACF1-221ENST00000487656 C6orf229H3BNL8 230 aa7.23□□□□□ -1.25
MACF1-221ENST00000487656 HSP90B1P14625 803 aaKnown RBP7.23□□□□□ -1.25
MACF1-221ENST00000487656 NDUFV2P19404 249 aa7.23□□□□□ -1.25
MACF1-221ENST00000487656 RPS12P25398 132 aaKnown RBP7.23□□□□□ -1.25
MACF1-221ENST00000487656 HUNKP57058 714 aa7.23□□□□□ -1.25
MACF1-221ENST00000487656 DGKZQ13574 1117 aa7.23□□□□□ -1.25
MACF1-221ENST00000487656 RALBP1Q15311 655 aa7.23□□□□□ -1.25
MACF1-221ENST00000487656 CSPP1Q1MSJ5 1256 aa7.23□□□□□ -1.25
MACF1-221ENST00000487656 KRT26Q7Z3Y9 468 aa7.23□□□□□ -1.25
MACF1-221ENST00000487656 SLC51AQ86UW1 340 aa7.23□□□□□ -1.25
MACF1-221ENST00000487656 EYA3Q99504 573 aa7.23□□□□□ -1.25
MACF1-221ENST00000487656 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.23□□□□□ -1.25
MACF1-221ENST00000487656 DBF4Q9UBU7 674 aaPredicted RBP7.23□□□□□ -1.25
MACF1-221ENST00000487656 LAS1LQ9Y4W2 734 aaKnown RBP7.23□□□□□ -1.25
MACF1-221ENST00000487656 YDJCA8MPS7 323 aa7.22□□□□□ -1.25
MACF1-221ENST00000487656 PSMD14O00487 310 aa7.22□□□□□ -1.25
MACF1-221ENST00000487656 CHL1O00533 1208 aa7.22□□□□□ -1.25
MACF1-221ENST00000487656 HRO43593 1189 aa7.22□□□□□ -1.25
MACF1-221ENST00000487656 RPS8P62241 208 aaKnown RBP7.22□□□□□ -1.25
MACF1-221ENST00000487656 SF3B3Q15393 1217 aaKnown RBP7.22□□□□□ -1.25
MACF1-221ENST00000487656 KMT5BQ4FZB7 885 aa7.22□□□□□ -1.25
MACF1-221ENST00000487656 ANKK1Q8NFD2 765 aa7.22□□□□□ -1.25
MACF1-221ENST00000487656 TRPM4Q8TD43 1214 aa7.22□□□□□ -1.25
MACF1-221ENST00000487656 FAM89AQ96GI7 184 aa7.22□□□□□ -1.25
MACF1-221ENST00000487656 ZC3H12CQ9C0D7 883 aaKnown RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 231.8 ms