RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 PCMTD2Q9NV79 361 aa7.52□□□□□ -1.21
SNRNP40-205ENST00000486941 CADPSQ9ULU8 1353 aa7.51□□□□□ -1.21
SNRNP40-205ENST00000486941 KIAA1324LA8MWY0 1029 aaPredicted RBP7.51□□□□□ -1.21
SNRNP40-205ENST00000486941 NFIAQ12857 509 aa7.51□□□□□ -1.21
SNRNP40-205ENST00000486941 FAM20CQ8IXL6 584 aa7.51□□□□□ -1.21
SNRNP40-205ENST00000486941 UTP4Q969X6 686 aaKnown RBP7.51□□□□□ -1.21
SNRNP40-205ENST00000486941 FOXD3Q9UJU5 478 aaPredicted RBP7.51□□□□□ -1.21
SNRNP40-205ENST00000486941 FZD6O60353 706 aa7.5□□□□□ -1.21
SNRNP40-205ENST00000486941 TNFRSF21O75509 655 aa7.5□□□□□ -1.21
SNRNP40-205ENST00000486941 PIP4K2BP78356 416 aa7.5□□□□□ -1.21
SNRNP40-205ENST00000486941 LCE3BQ5TA77 95 aa7.5□□□□□ -1.21
SNRNP40-205ENST00000486941 PEAR1Q5VY43 1037 aaPredicted RBP7.5□□□□□ -1.21
SNRNP40-205ENST00000486941 SHISA5Q8N114 240 aa7.5□□□□□ -1.21
SNRNP40-205ENST00000486941 TMEM102Q8N9M5 508 aaPredicted RBP7.5□□□□□ -1.21
SNRNP40-205ENST00000486941 OSMRQ99650 979 aa7.5□□□□□ -1.21
SNRNP40-205ENST00000486941 CEP41Q9BYV8 373 aa7.5□□□□□ -1.21
SNRNP40-205ENST00000486941 OSGEPQ9NPF4 335 aa7.5□□□□□ -1.21
SNRNP40-205ENST00000486941 LATS2Q9NRM7 1088 aa7.5□□□□□ -1.21
SNRNP40-205ENST00000486941 UVSSAQ2YD98 709 aa7.49□□□□□ -1.21
SNRNP40-205ENST00000486941 RNF43Q68DV7 783 aa7.49□□□□□ -1.21
SNRNP40-205ENST00000486941 FAM117BQ6P1L5 589 aa7.49□□□□□ -1.21
SNRNP40-205ENST00000486941 CCDC82Q8N4S0 544 aa7.49□□□□□ -1.21
SNRNP40-205ENST00000486941 SLC7A3Q8WY07 619 aa7.49□□□□□ -1.21
SNRNP40-205ENST00000486941 WNT8BQ93098 351 aa7.49□□□□□ -1.21
SNRNP40-205ENST00000486941 CCDC87Q9NVE4 849 aa7.49□□□□□ -1.21
SNRNP40-205ENST00000486941 OAS3Q9Y6K5 1087 aaKnown RBP7.49□□□□□ -1.21
SNRNP40-205ENST00000486941 BMP3P12645 472 aa7.48□□□□□ -1.21
SNRNP40-205ENST00000486941 SPINK2P20155 84 aa7.48□□□□□ -1.21
SNRNP40-205ENST00000486941 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.48□□□□□ -1.21
SNRNP40-205ENST00000486941 FAM83CQ9BQN1 747 aa7.48□□□□□ -1.21
SNRNP40-205ENST00000486941 WIZO95785 1651 aa7.47□□□□□ -1.21
SNRNP40-205ENST00000486941 METTL12A8MUP2 240 aa7.47□□□□□ -1.21
SNRNP40-205ENST00000486941 RPLP1P05386 114 aaKnown RBP7.47□□□□□ -1.21
SNRNP40-205ENST00000486941 ECM1Q16610 540 aa7.47□□□□□ -1.21
SNRNP40-205ENST00000486941 MCTP1Q6DN14 999 aa7.47□□□□□ -1.21
SNRNP40-205ENST00000486941 CLEC10AQ8IUN9 316 aa7.47□□□□□ -1.21
SNRNP40-205ENST00000486941 MEGF11A6BM72 1044 aa7.46□□□□□ -1.22
SNRNP40-205ENST00000486941 COBLO75128 1261 aa7.46□□□□□ -1.22
SNRNP40-205ENST00000486941 HOXA10P31260 410 aaPredicted RBP7.46□□□□□ -1.22
SNRNP40-205ENST00000486941 BEND4Q6ZU67 534 aa7.46□□□□□ -1.22
SNRNP40-205ENST00000486941 SHKBP1Q8TBC3 707 aa7.46□□□□□ -1.22
SNRNP40-205ENST00000486941 RUSC1Q9BVN2 902 aa7.46□□□□□ -1.22
SNRNP40-205ENST00000486941 TMPRSS13Q9BYE2 586 aa7.46□□□□□ -1.22
SNRNP40-205ENST00000486941 ANO2Q9NQ90 1003 aa7.46□□□□□ -1.22
SNRNP40-205ENST00000486941 MRC2Q9UBG0 1479 aa7.46□□□□□ -1.22
SNRNP40-205ENST00000486941 COL17A1Q9UMD9 1497 aaPredicted RBP7.46□□□□□ -1.22
SNRNP40-205ENST00000486941 LOC100289279A0A1B0GTE1 492 aa7.45□□□□□ -1.22
SNRNP40-205ENST00000486941 GSC2O15499 205 aa7.45□□□□□ -1.22
SNRNP40-205ENST00000486941 C19orf57Q0VDD7 668 aa7.45□□□□□ -1.22
SNRNP40-205ENST00000486941 SGO2Q562F6 1265 aa7.45□□□□□ -1.22
SNRNP40-205ENST00000486941 BSNDQ8WZ55 320 aa7.45□□□□□ -1.22
SNRNP40-205ENST00000486941 DBNDD2Q9BQY9 259 aa7.45□□□□□ -1.22
SNRNP40-205ENST00000486941 KRTAP9-9Q9BYP9 154 aa7.45□□□□□ -1.22
SNRNP40-205ENST00000486941 KRTAP9-4Q9BYQ2 154 aa7.45□□□□□ -1.22
SNRNP40-205ENST00000486941 BHLHE41Q9C0J9 482 aaPredicted RBP7.45□□□□□ -1.22
SNRNP40-205ENST00000486941 RNF208Q9H0X6 261 aa7.45□□□□□ -1.22
SNRNP40-205ENST00000486941 WDR62O43379 1518 aa7.45□□□□□ -1.22
SNRNP40-205ENST00000486941 TIAF1O95411 115 aa7.44□□□□□ -1.22
SNRNP40-205ENST00000486941 POLR3DP05423 398 aaPredicted RBP7.44□□□□□ -1.22
SNRNP40-205ENST00000486941 ESRRAP11474 423 aaPredicted RBP7.44□□□□□ -1.22
SNRNP40-205ENST00000486941 CABP4P57796 275 aa7.44□□□□□ -1.22
SNRNP40-205ENST00000486941 ANKRD34AQ69YU3 496 aa7.44□□□□□ -1.22
SNRNP40-205ENST00000486941 DTX1Q86Y01 620 aa7.44□□□□□ -1.22
SNRNP40-205ENST00000486941 GJD3Q8N144 294 aa7.44□□□□□ -1.22
SNRNP40-205ENST00000486941 PMEPA1Q969W9 287 aa7.44□□□□□ -1.22
SNRNP40-205ENST00000486941 NRSN2Q9GZP1 204 aa7.44□□□□□ -1.22
SNRNP40-205ENST00000486941 PHACTR2O75167 634 aa7.43□□□□□ -1.22
SNRNP40-205ENST00000486941 CTSBP07858 339 aa7.43□□□□□ -1.22
SNRNP40-205ENST00000486941 DRD2P14416 443 aa7.43□□□□□ -1.22
SNRNP40-205ENST00000486941 PCSK2P16519 638 aa7.43□□□□□ -1.22
SNRNP40-205ENST00000486941 GP2P55259 537 aaKnown RBP7.43□□□□□ -1.22
SNRNP40-205ENST00000486941 ZNF211Q13398 564 aaPredicted RBP7.43□□□□□ -1.22
SNRNP40-205ENST00000486941 IKBKEQ14164 716 aa7.43□□□□□ -1.22
SNRNP40-205ENST00000486941 KCNF1Q9H3M0 494 aa7.43□□□□□ -1.22
SNRNP40-205ENST00000486941 ZFYVE28Q9HCC9 887 aa7.43□□□□□ -1.22
SNRNP40-205ENST00000486941 MFSD14AQ96MC6 490 aa7.42□□□□□ -1.22
SNRNP40-205ENST00000486941 CEP164Q9UPV0 1460 aa7.42□□□□□ -1.22
SNRNP40-205ENST00000486941 SART1O43290 800 aaKnown RBP7.41□□□□□ -1.22
SNRNP40-205ENST00000486941 MAP4P27816 1152 aaKnown RBP7.41□□□□□ -1.22
SNRNP40-205ENST00000486941 FKBP4Q02790 459 aaKnown RBP eCLIP7.41□□□□□ -1.22
SNRNP40-205ENST00000486941 ZNF423Q2M1K9 1284 aa7.41□□□□□ -1.22
SNRNP40-205ENST00000486941 USPL1Q5W0Q7 1092 aa7.41□□□□□ -1.22
SNRNP40-205ENST00000486941 ALKBH2Q6NS38 261 aa7.41□□□□□ -1.22
SNRNP40-205ENST00000486941 CDPF1Q6NVV7 123 aa7.41□□□□□ -1.22
SNRNP40-205ENST00000486941 NFXL1Q6ZNB6 911 aa7.41□□□□□ -1.22
SNRNP40-205ENST00000486941 SMG8Q8ND04 991 aaKnown RBP7.41□□□□□ -1.22
SNRNP40-205ENST00000486941 ASAP3Q8TDY4 903 aa7.41□□□□□ -1.22
SNRNP40-205ENST00000486941 SNX29Q8TEQ0 813 aa7.41□□□□□ -1.22
SNRNP40-205ENST00000486941 SUGCTQ9HAC7 445 aa7.41□□□□□ -1.22
SNRNP40-205ENST00000486941 CFTRP13569 1480 aa7.41□□□□□ -1.22
SNRNP40-205ENST00000486941 FANCD2Q9BXW9 1451 aa7.41□□□□□ -1.22
SNRNP40-205ENST00000486941 WDR64B1ANS9 1081 aa7.4□□□□□ -1.22
SNRNP40-205ENST00000486941 FAM13AO94988 1023 aa7.4□□□□□ -1.22
SNRNP40-205ENST00000486941 F13BP05160 661 aa7.4□□□□□ -1.22
SNRNP40-205ENST00000486941 SPRED3Q2MJR0 410 aa7.4□□□□□ -1.22
SNRNP40-205ENST00000486941 FDX2Q6P4F2 183 aa7.4□□□□□ -1.22
SNRNP40-205ENST00000486941 TCF12Q99081 682 aa7.4□□□□□ -1.22
SNRNP40-205ENST00000486941 USP26Q9BXU7 913 aa7.4□□□□□ -1.22
SNRNP40-205ENST00000486941 RSF1Q96T23 1441 aaPredicted RBP7.39□□□□□ -1.23
SNRNP40-205ENST00000486941 A0A1W2PP55 124 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms