RNA–Protein interactions for RNA: ENST00000486524.1

SLX4-203, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 2

Gene SLX4, Length 3,075 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-203ENST00000486524 SPEF2Q9C093 1822 aa13.24□□□□□ -0.29
SLX4-203ENST00000486524 DOT1LQ8TEK3 1739 aa13.24□□□□□ -0.29
SLX4-203ENST00000486524 RALYLQ86SE5 291 aaKnown RBP13.24□□□□□ -0.29
SLX4-203ENST00000486524 CCDC87Q9NVE4 849 aa13.24□□□□□ -0.29
SLX4-203ENST00000486524 CCDC39Q9UFE4 941 aa13.24□□□□□ -0.29
SLX4-203ENST00000486524 MARCH10Q8NA82 808 aaPredicted RBP13.24□□□□□ -0.29
SLX4-203ENST00000486524 PGBD1Q96JS3 809 aa13.24□□□□□ -0.29
SLX4-203ENST00000486524 MPHOSPH8Q99549 860 aa13.24□□□□□ -0.29
SLX4-203ENST00000486524 AGXT2Q9BYV1 514 aa13.24□□□□□ -0.29
SLX4-203ENST00000486524 WWC3Q9ULE0 1092 aa13.24□□□□□ -0.29
SLX4-203ENST00000486524 MYH3P11055 1940 aa13.23□□□□□ -0.29
SLX4-203ENST00000486524 LOC102724428A0A0B4J2F2 783 aa13.23□□□□□ -0.29
SLX4-203ENST00000486524 KLF18A0A0U1RQI7 1052 aa13.23□□□□□ -0.29
SLX4-203ENST00000486524 ADCY5O95622 1261 aa13.23□□□□□ -0.29
SLX4-203ENST00000486524 ADD2P35612 726 aa13.23□□□□□ -0.29
SLX4-203ENST00000486524 EIF5P55010 431 aaKnown RBP13.23□□□□□ -0.29
SLX4-203ENST00000486524 SIK1P57059 783 aa13.23□□□□□ -0.29
SLX4-203ENST00000486524 MAP3K11Q16584 847 aa13.23□□□□□ -0.29
SLX4-203ENST00000486524 OTUD7BQ6GQQ9 843 aa13.23□□□□□ -0.29
SLX4-203ENST00000486524 FUCA2Q9BTY2 467 aa13.23□□□□□ -0.29
SLX4-203ENST00000486524 TNMDQ9H2S6 317 aa13.23□□□□□ -0.29
SLX4-203ENST00000486524 SPATA31A1Q5TZJ5 1347 aa13.23□□□□□ -0.29
SLX4-203ENST00000486524 ZNF532Q9HCE3 1301 aa13.23□□□□□ -0.29
SLX4-203ENST00000486524 GOLGA8BA8MQT2 603 aa13.23□□□□□ -0.29
SLX4-203ENST00000486524 NR1I2O75469 434 aa13.23□□□□□ -0.29
SLX4-203ENST00000486524 PIP4K2BP78356 416 aa13.23□□□□□ -0.29
SLX4-203ENST00000486524 ITPK1Q13572 414 aa13.23□□□□□ -0.29
SLX4-203ENST00000486524 PUM3Q15397 648 aaKnown RBP13.23□□□□□ -0.29
SLX4-203ENST00000486524 HS1BP3Q53T59 392 aa13.23□□□□□ -0.29
SLX4-203ENST00000486524 TICAM2Q86XR7 235 aa13.23□□□□□ -0.29
SLX4-203ENST00000486524 NWD2Q9ULI1 1742 aa13.22□□□□□ -0.29
SLX4-203ENST00000486524 CCDC192P0DO97 292 aa13.22□□□□□ -0.29
SLX4-203ENST00000486524 MCM5P33992 734 aa13.22□□□□□ -0.29
SLX4-203ENST00000486524 KCNQ4P56696 695 aa13.22□□□□□ -0.29
SLX4-203ENST00000486524 HMGN5P82970 282 aaKnown RBP13.22□□□□□ -0.29
SLX4-203ENST00000486524 NCOA7Q8NI08 942 aa13.22□□□□□ -0.29
SLX4-203ENST00000486524 ZNF274Q96GC6 653 aaPredicted RBP13.22□□□□□ -0.29
SLX4-203ENST00000486524 ZNF830Q96NB3 372 aaPredicted RBP13.22□□□□□ -0.29
SLX4-203ENST00000486524 UTP14AQ9BVJ6 771 aaKnown RBP13.22□□□□□ -0.29
SLX4-203ENST00000486524 ZSCAN16Q9H4T2 348 aaPredicted RBP13.22□□□□□ -0.29
SLX4-203ENST00000486524 NIP7Q9Y221 180 aaKnown RBP eCLIP13.22□□□□□ -0.29
SLX4-203ENST00000486524 ANKRD36CQ5JPF3 1778 aa13.22□□□□□ -0.29
SLX4-203ENST00000486524 MYO5AQ9Y4I1 1855 aaKnown RBP13.22□□□□□ -0.29
SLX4-203ENST00000486524 KCNQ2O43526 872 aa13.22□□□□□ -0.29
SLX4-203ENST00000486524 ZSCAN25Q6NSZ9 544 aa13.22□□□□□ -0.29
SLX4-203ENST00000486524 ZKSCAN5Q9Y2L8 839 aa13.22□□□□□ -0.29
SLX4-203ENST00000486524 SLIT2O94813 1529 aa13.22□□□□□ -0.29
SLX4-203ENST00000486524 AKAP11Q9UKA4 1901 aa13.22□□□□□ -0.29
SLX4-203ENST00000486524 KDM4AO75164 1064 aa13.21□□□□□ -0.29
SLX4-203ENST00000486524 ANTXR2P58335 489 aa13.21□□□□□ -0.29
SLX4-203ENST00000486524 TTF1Q15361 905 aaPredicted RBP13.21□□□□□ -0.29
SLX4-203ENST00000486524 NKX2-3Q8TAU0 364 aa13.21□□□□□ -0.29
SLX4-203ENST00000486524 CFAP45Q9UL16 551 aa13.21□□□□□ -0.29
SLX4-203ENST00000486524 PDE6AP16499 860 aa13.21□□□□□ -0.29
SLX4-203ENST00000486524 UVSSAQ2YD98 709 aa13.21□□□□□ -0.29
SLX4-203ENST00000486524 MB21D2Q8IYB1 491 aaPredicted RBP13.21□□□□□ -0.29
SLX4-203ENST00000486524 LPIN2Q92539 896 aa13.21□□□□□ -0.29
SLX4-203ENST00000486524 KIF3AQ9Y496 699 aa13.21□□□□□ -0.29
SLX4-203ENST00000486524 CARMIL3Q8ND23 1372 aa13.21□□□□□ -0.3
SLX4-203ENST00000486524 RXRAP19793 462 aa13.21□□□□□ -0.3
SLX4-203ENST00000486524 AIDAQ96BJ3 306 aa13.21□□□□□ -0.3
SLX4-203ENST00000486524 INCENPQ9NQS7 918 aa13.21□□□□□ -0.3
SLX4-203ENST00000486524 GJB4Q9NTQ9 266 aa13.21□□□□□ -0.3
SLX4-203ENST00000486524 MROH5Q6ZUA9 1318 aa13.2□□□□□ -0.3
SLX4-203ENST00000486524 SLC5A1P13866 664 aa13.2□□□□□ -0.3
SLX4-203ENST00000486524 FDPSP14324 419 aaKnown RBP13.2□□□□□ -0.3
SLX4-203ENST00000486524 TYRO3Q06418 890 aa13.2□□□□□ -0.3
SLX4-203ENST00000486524 TRDNQ13061 729 aa13.2□□□□□ -0.3
SLX4-203ENST00000486524 NAA16Q6N069 864 aaPredicted RBP13.2□□□□□ -0.3
SLX4-203ENST00000486524 TBC1D10CQ8IV04 446 aa13.2□□□□□ -0.3
SLX4-203ENST00000486524 STK11IPQ8N1F8 1099 aa13.2□□□□□ -0.3
SLX4-203ENST00000486524 MAGEB6Q8N7X4 407 aa13.2□□□□□ -0.3
SLX4-203ENST00000486524 SPATA5Q8NB90 893 aa13.2□□□□□ -0.3
SLX4-203ENST00000486524 NBPF3Q9H094 633 aa13.2□□□□□ -0.3
SLX4-203ENST00000486524 IQSEC3Q9UPP2 1182 aaPredicted RBP13.2□□□□□ -0.3
SLX4-203ENST00000486524 MYH7P12883 1935 aa13.2□□□□□ -0.3
SLX4-203ENST00000486524 SALL1Q9NSC2 1324 aa13.2□□□□□ -0.3
SLX4-203ENST00000486524 CPLX1O14810 134 aa13.2□□□□□ -0.3
SLX4-203ENST00000486524 CAMTA2O94983 1202 aa13.2□□□□□ -0.3
SLX4-203ENST00000486524 RASGRF1Q13972 1273 aa13.2□□□□□ -0.3
SLX4-203ENST00000486524 SMIM5Q71RC9 77 aa13.2□□□□□ -0.3
SLX4-203ENST00000486524 USP28Q96RU2 1077 aa13.2□□□□□ -0.3
SLX4-203ENST00000486524 ABCC12Q96J65 1359 aa13.2□□□□□ -0.3
SLX4-203ENST00000486524 ARID4AP29374 1257 aaPredicted RBP13.19□□□□□ -0.3
SLX4-203ENST00000486524 ADD1P35611 737 aaKnown RBP13.19□□□□□ -0.3
SLX4-203ENST00000486524 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.19□□□□□ -0.3
SLX4-203ENST00000486524 PLCH1Q4KWH8 1693 aa13.19□□□□□ -0.3
SLX4-203ENST00000486524 AP5Z1O43299 807 aa13.19□□□□□ -0.3
SLX4-203ENST00000486524 UQCRFS1P1P0C7P4 283 aa13.19□□□□□ -0.3
SLX4-203ENST00000486524 BCAMP50895 628 aa13.19□□□□□ -0.3
SLX4-203ENST00000486524 LUZP1Q86V48 1076 aa13.19□□□□□ -0.3
SLX4-203ENST00000486524 CCDC144CPQ8IYA2 1237 aa13.19□□□□□ -0.3
SLX4-203ENST00000486524 CDCA7Q9BWT1 371 aaPredicted RBP13.19□□□□□ -0.3
SLX4-203ENST00000486524 HPS5Q9UPZ3 1129 aa13.19□□□□□ -0.3
SLX4-203ENST00000486524 MRVI1Q9Y6F6 885 aa13.19□□□□□ -0.3
SLX4-203ENST00000486524 B4E1Z4 1266 aa13.19□□□□□ -0.3
SLX4-203ENST00000486524 POLR3DP05423 398 aaPredicted RBP13.19□□□□□ -0.3
SLX4-203ENST00000486524 FGFR2P21802 821 aa13.19□□□□□ -0.3
SLX4-203ENST00000486524 ANO6Q4KMQ2 910 aa13.19□□□□□ -0.3
SLX4-203ENST00000486524 BICDL1Q6ZP65 573 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms