RNA–Protein interactions for RNA: ENST00000486335.1

CCDC142-208, Transcript of coiled-coil domain containing 142, humanhuman

TSL 5

Gene CCDC142, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-208ENST00000486335 CWC25Q9NXE8 425 aaPredicted RBP11.88□□□□□ -0.51
CCDC142-208ENST00000486335 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.88□□□□□ -0.51
CCDC142-208ENST00000486335 CUL9Q8IWT3 2517 aa11.87□□□□□ -0.51
CCDC142-208ENST00000486335 LMOD3Q0VAK6 560 aa11.87□□□□□ -0.51
CCDC142-208ENST00000486335 BRI3BPQ8WY22 251 aa11.87□□□□□ -0.51
CCDC142-208ENST00000486335 FBXW7Q969H0 707 aa11.87□□□□□ -0.51
CCDC142-208ENST00000486335 ARHGAP39Q9C0H5 1083 aa11.87□□□□□ -0.51
CCDC142-208ENST00000486335 CD209Q9NNX6 404 aa11.87□□□□□ -0.51
CCDC142-208ENST00000486335 RBM27Q9P2N5 1060 aaKnown RBP11.87□□□□□ -0.51
CCDC142-208ENST00000486335 LAMB1P07942 1786 aa11.87□□□□□ -0.51
CCDC142-208ENST00000486335 ZNF804BA4D1E1 1349 aa11.86□□□□□ -0.51
CCDC142-208ENST00000486335 CLRN2A0PK11 232 aa11.86□□□□□ -0.51
CCDC142-208ENST00000486335 UNCXA6NJT0 531 aa11.86□□□□□ -0.51
CCDC142-208ENST00000486335 ELL2O00472 640 aaPredicted RBP11.86□□□□□ -0.51
CCDC142-208ENST00000486335 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.86□□□□□ -0.51
CCDC142-208ENST00000486335 UBE2Q1Q7Z7E8 422 aa11.86□□□□□ -0.51
CCDC142-208ENST00000486335 C8orf58Q8NAV2 365 aa11.86□□□□□ -0.51
CCDC142-208ENST00000486335 SHISA4Q96DD7 197 aa11.86□□□□□ -0.51
CCDC142-208ENST00000486335 TEPSINQ96N21 525 aa11.86□□□□□ -0.51
CCDC142-208ENST00000486335 LEMD3Q9Y2U8 911 aa11.86□□□□□ -0.51
CCDC142-208ENST00000486335 SPDYE2BA6NHP3 402 aa11.85□□□□□ -0.51
CCDC142-208ENST00000486335 H7C1W4 665 aa11.85□□□□□ -0.51
CCDC142-208ENST00000486335 SPDYE6P0CI01 402 aa11.85□□□□□ -0.51
CCDC142-208ENST00000486335 CTGFP29279 349 aa11.85□□□□□ -0.51
CCDC142-208ENST00000486335 CASP7P55210 303 aa11.85□□□□□ -0.51
CCDC142-208ENST00000486335 GOLGA2Q08379 1002 aa11.85□□□□□ -0.51
CCDC142-208ENST00000486335 CHRDL2Q6WN34 429 aa11.85□□□□□ -0.51
CCDC142-208ENST00000486335 FAM43AQ8N2R8 423 aa11.85□□□□□ -0.51
CCDC142-208ENST00000486335 CDC5LQ99459 802 aaKnown RBP11.85□□□□□ -0.51
CCDC142-208ENST00000486335 DLL1O00548 723 aa11.84□□□□□ -0.51
CCDC142-208ENST00000486335 PPP1R12BO60237 982 aaPredicted RBP11.84□□□□□ -0.51
CCDC142-208ENST00000486335 MYCP01106 439 aaPredicted RBP11.84□□□□□ -0.51
CCDC142-208ENST00000486335 HSP90B1P14625 803 aaKnown RBP11.84□□□□□ -0.51
CCDC142-208ENST00000486335 RASA3Q14644 834 aa11.84□□□□□ -0.51
CCDC142-208ENST00000486335 DLGAP5Q15398 846 aa11.84□□□□□ -0.51
CCDC142-208ENST00000486335 CFAP100Q494V2 611 aa11.84□□□□□ -0.51
CCDC142-208ENST00000486335 FAM9BQ8IZU0 186 aa11.84□□□□□ -0.51
CCDC142-208ENST00000486335 TSPYL6Q8N831 410 aa11.84□□□□□ -0.51
CCDC142-208ENST00000486335 SH3TC2Q8TF17 1288 aa11.84□□□□□ -0.51
CCDC142-208ENST00000486335 TMEM106CQ9BVX2 250 aa11.84□□□□□ -0.51
CCDC142-208ENST00000486335 MAP3K2Q9Y2U5 619 aa11.84□□□□□ -0.51
CCDC142-208ENST00000486335 PPP2R3BQ9Y5P8 575 aa11.84□□□□□ -0.51
CCDC142-208ENST00000486335 COL1A1P02452 1464 aaPredicted RBP11.83□□□□□ -0.52
CCDC142-208ENST00000486335 PI4KAP2A4QPH2 592 aa11.83□□□□□ -0.52
CCDC142-208ENST00000486335 CSF1RP07333 972 aa11.83□□□□□ -0.52
CCDC142-208ENST00000486335 MTFR1Q15390 333 aa11.83□□□□□ -0.52
CCDC142-208ENST00000486335 CWF19L2Q2TBE0 894 aaKnown RBP11.83□□□□□ -0.52
CCDC142-208ENST00000486335 C15orf52Q6ZUT6 534 aaKnown RBP11.83□□□□□ -0.52
CCDC142-208ENST00000486335 PI4KAP1Q8N8J0 262 aa11.83□□□□□ -0.52
CCDC142-208ENST00000486335 RUNDC1Q96C34 613 aa11.83□□□□□ -0.52
CCDC142-208ENST00000486335 OPTNQ96CV9 577 aa11.83□□□□□ -0.52
CCDC142-208ENST00000486335 ELP3Q9H9T3 547 aa11.83□□□□□ -0.52
CCDC142-208ENST00000486335 ADAMTS8Q9UP79 889 aa11.83□□□□□ -0.52
CCDC142-208ENST00000486335 NEURL1BA8MQ27 555 aa11.82□□□□□ -0.52
CCDC142-208ENST00000486335 F8W031 263 aaPredicted RBP11.82□□□□□ -0.52
CCDC142-208ENST00000486335 SOX1O00570 391 aaPredicted RBP11.82□□□□□ -0.52
CCDC142-208ENST00000486335 IL1R1P14778 569 aa11.82□□□□□ -0.52
CCDC142-208ENST00000486335 CHRNDQ07001 517 aa11.82□□□□□ -0.52
CCDC142-208ENST00000486335 SUPT20HL1Q3ZLR7 823 aa11.82□□□□□ -0.52
CCDC142-208ENST00000486335 SLC9C1Q4G0N8 1177 aa11.82□□□□□ -0.52
CCDC142-208ENST00000486335 KSR2Q6VAB6 950 aa11.82□□□□□ -0.52
CCDC142-208ENST00000486335 G2E3Q7L622 706 aa11.82□□□□□ -0.52
CCDC142-208ENST00000486335 ANKRD13AQ8IZ07 590 aa11.82□□□□□ -0.52
CCDC142-208ENST00000486335 YTHDC1Q96MU7 727 aaKnown RBP11.82□□□□□ -0.52
CCDC142-208ENST00000486335 PLA2G12BQ9BX93 195 aa11.82□□□□□ -0.52
CCDC142-208ENST00000486335 TAF5LO75529 589 aa11.81□□□□□ -0.52
CCDC142-208ENST00000486335 ITGA6P23229 1130 aa11.81□□□□□ -0.52
CCDC142-208ENST00000486335 IREB2P48200 963 aaKnown RBP11.81□□□□□ -0.52
CCDC142-208ENST00000486335 SLC4A8Q2Y0W8 1093 aa11.81□□□□□ -0.52
CCDC142-208ENST00000486335 OTUD7BQ6GQQ9 843 aa11.81□□□□□ -0.52
CCDC142-208ENST00000486335 HELBQ8NG08 1087 aaPredicted RBP11.81□□□□□ -0.52
CCDC142-208ENST00000486335 JAG2Q9Y219 1238 aa11.81□□□□□ -0.52
CCDC142-208ENST00000486335 ZSWIM8A7E2V4 1837 aa11.81□□□□□ -0.52
CCDC142-208ENST00000486335 FKBP1AP62942 108 aaKnown RBP11.8□□□□□ -0.52
CCDC142-208ENST00000486335 VGLL4Q14135 290 aa11.8□□□□□ -0.52
CCDC142-208ENST00000486335 TAF1CQ15572 869 aaPredicted RBP11.8□□□□□ -0.52
CCDC142-208ENST00000486335 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.8□□□□□ -0.52
CCDC142-208ENST00000486335 ANKRD2Q9GZV1 360 aa11.8□□□□□ -0.52
CCDC142-208ENST00000486335 ZNF70Q9UC06 446 aaPredicted RBP11.8□□□□□ -0.52
CCDC142-208ENST00000486335 CCL15-CCL14A0A0B4J2E2 113 aa11.79□□□□□ -0.52
CCDC142-208ENST00000486335 BTBD19C9JJ37 291 aa11.79□□□□□ -0.52
CCDC142-208ENST00000486335 TLR2O60603 784 aa11.79□□□□□ -0.52
CCDC142-208ENST00000486335 LACTBP83111 547 aaPredicted RBP11.79□□□□□ -0.52
CCDC142-208ENST00000486335 GRIK5Q16478 980 aa11.79□□□□□ -0.52
CCDC142-208ENST00000486335 CCL15Q16663 113 aa11.79□□□□□ -0.52
CCDC142-208ENST00000486335 SPDYE2Q495Y8 402 aa11.79□□□□□ -0.52
CCDC142-208ENST00000486335 UBE3BQ7Z3V4 1068 aa11.79□□□□□ -0.52
CCDC142-208ENST00000486335 NBPF11Q86T75 865 aa11.79□□□□□ -0.52
CCDC142-208ENST00000486335 SLC17A8Q8NDX2 589 aa11.79□□□□□ -0.52
CCDC142-208ENST00000486335 VEZTQ9HBM0 779 aa11.79□□□□□ -0.52
CCDC142-208ENST00000486335 ZFYVE28Q9HCC9 887 aa11.79□□□□□ -0.52
CCDC142-208ENST00000486335 IFT57Q9NWB7 429 aa11.79□□□□□ -0.52
CCDC142-208ENST00000486335 OTOFQ9HC10 1997 aa11.78□□□□□ -0.52
CCDC142-208ENST00000486335 CENPBP07199 599 aaPredicted RBP11.78□□□□□ -0.52
CCDC142-208ENST00000486335 IGHMBP2P38935 993 aaKnown RBP11.78□□□□□ -0.52
CCDC142-208ENST00000486335 MAP3K9P80192 1104 aa11.78□□□□□ -0.52
CCDC142-208ENST00000486335 GCKRQ14397 625 aa11.78□□□□□ -0.52
CCDC142-208ENST00000486335 WDR43Q15061 677 aaKnown RBP eCLIP11.78□□□□□ -0.52
CCDC142-208ENST00000486335 C17orf99Q6UX52 265 aa11.78□□□□□ -0.52
CCDC142-208ENST00000486335 TMEM39BQ9GZU3 492 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms