RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 RNF208Q9H0X6 261 aa7.97□□□□□ -1.13
SMC4-215ENST00000484799 KCNF1Q9H3M0 494 aa7.97□□□□□ -1.13
SMC4-215ENST00000484799 BIN2Q9UBW5 565 aaPredicted RBP7.97□□□□□ -1.13
SMC4-215ENST00000484799 GAS2O43903 313 aaKnown RBP7.96□□□□□ -1.14
SMC4-215ENST00000484799 WISP1O95388 367 aa7.96□□□□□ -1.14
SMC4-215ENST00000484799 GSTM4Q03013 218 aa7.96□□□□□ -1.14
SMC4-215ENST00000484799 UVSSAQ2YD98 709 aa7.96□□□□□ -1.14
SMC4-215ENST00000484799 ANKRD34AQ69YU3 496 aa7.96□□□□□ -1.14
SMC4-215ENST00000484799 C12orf50Q8NA57 414 aaPredicted RBP7.96□□□□□ -1.14
SMC4-215ENST00000484799 UBASH3BQ8TF42 649 aa7.96□□□□□ -1.14
SMC4-215ENST00000484799 PPP4R2Q9NY27 417 aa7.96□□□□□ -1.14
SMC4-215ENST00000484799 SOX13Q9UN79 622 aa7.96□□□□□ -1.14
SMC4-215ENST00000484799 SOX1O00570 391 aaPredicted RBP7.95□□□□□ -1.14
SMC4-215ENST00000484799 FSTP19883 344 aa7.95□□□□□ -1.14
SMC4-215ENST00000484799 XP32Q5T750 250 aa7.95□□□□□ -1.14
SMC4-215ENST00000484799 KIAA1211Q6ZU35 1233 aa7.95□□□□□ -1.14
SMC4-215ENST00000484799 UBL7Q96S82 380 aaPredicted RBP7.95□□□□□ -1.14
SMC4-215ENST00000484799 EHD4Q9H223 541 aa7.95□□□□□ -1.14
SMC4-215ENST00000484799 LIN7BQ9HAP6 207 aa7.95□□□□□ -1.14
SMC4-215ENST00000484799 ZFYVE1Q9HBF4 777 aa7.95□□□□□ -1.14
SMC4-215ENST00000484799 CPNE3O75131 537 aaKnown RBP7.94□□□□□ -1.14
SMC4-215ENST00000484799 RXRBP28702 533 aa7.94□□□□□ -1.14
SMC4-215ENST00000484799 ADAMTSL4Q6UY14 1074 aa7.94□□□□□ -1.14
SMC4-215ENST00000484799 CYP4F12Q9HCS2 524 aa7.94□□□□□ -1.14
SMC4-215ENST00000484799 LATS2Q9NRM7 1088 aa7.94□□□□□ -1.14
SMC4-215ENST00000484799 HP1BP3Q5SSJ5 553 aaPredicted RBP7.93□□□□□ -1.14
SMC4-215ENST00000484799 ARTNQ5T4W7 220 aa7.93□□□□□ -1.14
SMC4-215ENST00000484799 Q6ZS46 218 aa7.93□□□□□ -1.14
SMC4-215ENST00000484799 GIMAP7Q8NHV1 300 aa7.93□□□□□ -1.14
SMC4-215ENST00000484799 FOXD4L4Q8WXT5 416 aaPredicted RBP7.93□□□□□ -1.14
SMC4-215ENST00000484799 BHLHE41Q9C0J9 482 aaPredicted RBP7.93□□□□□ -1.14
SMC4-215ENST00000484799 TIMELESSQ9UNS1 1208 aa7.93□□□□□ -1.14
SMC4-215ENST00000484799 A0A096LPE4 126 aa7.92□□□□□ -1.14
SMC4-215ENST00000484799 A0A1W2PPZ6 126 aa7.92□□□□□ -1.14
SMC4-215ENST00000484799 ADAM11O75078 769 aa7.92□□□□□ -1.14
SMC4-215ENST00000484799 GADD45BO75293 160 aaPredicted RBP7.92□□□□□ -1.14
SMC4-215ENST00000484799 BMP3P12645 472 aa7.92□□□□□ -1.14
SMC4-215ENST00000484799 USP11P51784 963 aa7.92□□□□□ -1.14
SMC4-215ENST00000484799 VN1R5Q7Z5H4 357 aa7.92□□□□□ -1.14
SMC4-215ENST00000484799 GALNT12Q8IXK2 581 aa7.92□□□□□ -1.14
SMC4-215ENST00000484799 NIF3L1Q9GZT8 377 aa7.92□□□□□ -1.14
SMC4-215ENST00000484799 RAD18Q9NS91 495 aa7.92□□□□□ -1.14
SMC4-215ENST00000484799 RNF112Q9ULX5 631 aa7.92□□□□□ -1.14
SMC4-215ENST00000484799 A0A1W2PP55 124 aa7.91□□□□□ -1.14
SMC4-215ENST00000484799 IGLV1-40P01703 118 aa7.91□□□□□ -1.14
SMC4-215ENST00000484799 CYP11A1P05108 521 aa7.91□□□□□ -1.14
SMC4-215ENST00000484799 LRP8Q14114 963 aa7.91□□□□□ -1.14
SMC4-215ENST00000484799 EXOSC6Q5RKV6 272 aaKnown RBP7.91□□□□□ -1.14
SMC4-215ENST00000484799 PEAR1Q5VY43 1037 aaPredicted RBP7.91□□□□□ -1.14
SMC4-215ENST00000484799 TXNDC2Q86VQ3 553 aa7.91□□□□□ -1.14
SMC4-215ENST00000484799 CLEC10AQ8IUN9 316 aa7.91□□□□□ -1.14
SMC4-215ENST00000484799 MYRFLQ96LU7 910 aa7.91□□□□□ -1.14
SMC4-215ENST00000484799 SOX17Q9H6I2 414 aaPredicted RBP7.91□□□□□ -1.14
SMC4-215ENST00000484799 MEGF11A6BM72 1044 aa7.9□□□□□ -1.14
SMC4-215ENST00000484799 ESRRAP11474 423 aaPredicted RBP7.9□□□□□ -1.14
SMC4-215ENST00000484799 PCDH1Q08174 1060 aa7.9□□□□□ -1.14
SMC4-215ENST00000484799 BEND4Q6ZU67 534 aa7.9□□□□□ -1.14
SMC4-215ENST00000484799 FAM46AQ96IP4 442 aaKnown RBP7.9□□□□□ -1.14
SMC4-215ENST00000484799 DMRTB1Q96MA1 342 aa7.9□□□□□ -1.14
SMC4-215ENST00000484799 DNAJC25Q9H1X3 360 aa7.9□□□□□ -1.14
SMC4-215ENST00000484799 CLEC4MQ9H2X3 399 aaPredicted RBP7.9□□□□□ -1.14
SMC4-215ENST00000484799 PCMTD2Q9NV79 361 aa7.9□□□□□ -1.14
SMC4-215ENST00000484799 METTL12A8MUP2 240 aa7.89□□□□□ -1.15
SMC4-215ENST00000484799 BRD1O95696 1058 aa7.89□□□□□ -1.15
SMC4-215ENST00000484799 GRIK1P39086 918 aa7.89□□□□□ -1.15
SMC4-215ENST00000484799 ARHGAP4P98171 946 aa7.89□□□□□ -1.15
SMC4-215ENST00000484799 HGSNATQ68CP4 663 aa7.89□□□□□ -1.15
SMC4-215ENST00000484799 CCNJLQ8IV13 435 aa7.89□□□□□ -1.15
SMC4-215ENST00000484799 TRIM42Q8IWZ5 723 aa7.89□□□□□ -1.15
SMC4-215ENST00000484799 YIPF2Q9BWQ6 316 aa7.89□□□□□ -1.15
SMC4-215ENST00000484799 NLRP2Q9NX02 1062 aa7.89□□□□□ -1.15
SMC4-215ENST00000484799 HIF3AQ9Y2N7 669 aa7.89□□□□□ -1.15
SMC4-215ENST00000484799 HMX2A2RU54 273 aa7.88□□□□□ -1.15
SMC4-215ENST00000484799 HYAL3O43820 417 aaPredicted RBP7.88□□□□□ -1.15
SMC4-215ENST00000484799 SSTR4P31391 388 aa7.88□□□□□ -1.15
SMC4-215ENST00000484799 HNRNPUQ00839 825 aaKnown RBP eCLIP7.88□□□□□ -1.15
SMC4-215ENST00000484799 ORC1Q13415 861 aa7.88□□□□□ -1.15
SMC4-215ENST00000484799 KIAA0319Q5VV43 1072 aa7.88□□□□□ -1.15
SMC4-215ENST00000484799 USPL1Q5W0Q7 1092 aa7.88□□□□□ -1.15
SMC4-215ENST00000484799 FAM20CQ8IXL6 584 aa7.88□□□□□ -1.15
SMC4-215ENST00000484799 ARMC10Q8N2F6 343 aa7.88□□□□□ -1.15
SMC4-215ENST00000484799 FAM83CQ9BQN1 747 aa7.88□□□□□ -1.15
SMC4-215ENST00000484799 CORO1BQ9BR76 489 aa7.88□□□□□ -1.15
SMC4-215ENST00000484799 C7orf69Q9H7B7 122 aa7.88□□□□□ -1.15
SMC4-215ENST00000484799 TRAK1Q9UPV9 953 aa7.88□□□□□ -1.15
SMC4-215ENST00000484799 EIF1AYO14602 144 aaKnown RBP7.87□□□□□ -1.15
SMC4-215ENST00000484799 NFIAQ12857 509 aa7.87□□□□□ -1.15
SMC4-215ENST00000484799 SPRED3Q2MJR0 410 aa7.87□□□□□ -1.15
SMC4-215ENST00000484799 RNF43Q68DV7 783 aa7.87□□□□□ -1.15
SMC4-215ENST00000484799 ATG3Q9NT62 314 aa7.87□□□□□ -1.15
SMC4-215ENST00000484799 SOWAHDA6NJG2 315 aa7.86□□□□□ -1.15
SMC4-215ENST00000484799 COBLO75128 1261 aa7.86□□□□□ -1.15
SMC4-215ENST00000484799 MAP4P27816 1152 aaKnown RBP7.86□□□□□ -1.15
SMC4-215ENST00000484799 PREPP48147 710 aa7.86□□□□□ -1.15
SMC4-215ENST00000484799 PLCB3Q01970 1234 aa7.86□□□□□ -1.15
SMC4-215ENST00000484799 POU4F3Q15319 338 aa7.86□□□□□ -1.15
SMC4-215ENST00000484799 NFKBIBQ15653 356 aa7.86□□□□□ -1.15
SMC4-215ENST00000484799 PAOXQ6QHF9 649 aa7.86□□□□□ -1.15
SMC4-215ENST00000484799 CCDC74AQ96AQ1 378 aa7.86□□□□□ -1.15
SMC4-215ENST00000484799 FAM129BQ96TA1 746 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms