RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 PPP1R1BQ9UD71 204 aaPredicted RBP11.6□□□□□ -0.55
COL8A1-207ENST00000483969 LAS1LQ9Y4W2 734 aaKnown RBP11.6□□□□□ -0.55
COL8A1-207ENST00000483969 AP1G2O75843 785 aa11.59□□□□□ -0.55
COL8A1-207ENST00000483969 EIF4A1P60842 406 aaKnown RBP11.59□□□□□ -0.55
COL8A1-207ENST00000483969 CBLBQ13191 982 aa11.59□□□□□ -0.55
COL8A1-207ENST00000483969 INTS6LQ5JSJ4 861 aaKnown RBP11.59□□□□□ -0.55
COL8A1-207ENST00000483969 NGEFQ8N5V2 710 aa11.59□□□□□ -0.55
COL8A1-207ENST00000483969 NUP188Q5SRE5 1749 aa11.58□□□□□ -0.56
COL8A1-207ENST00000483969 A0A087WZG4 1122 aa11.58□□□□□ -0.56
COL8A1-207ENST00000483969 CHL1O00533 1208 aa11.58□□□□□ -0.56
COL8A1-207ENST00000483969 CANXP27824 592 aaKnown RBP11.58□□□□□ -0.56
COL8A1-207ENST00000483969 CCDC27Q2M243 656 aa11.58□□□□□ -0.56
COL8A1-207ENST00000483969 NLGN1Q8N2Q7 840 aa11.58□□□□□ -0.56
COL8A1-207ENST00000483969 USP16Q9Y5T5 823 aa11.58□□□□□ -0.56
COL8A1-207ENST00000483969 GIGYF1O75420 1035 aaPredicted RBP11.57□□□□□ -0.56
COL8A1-207ENST00000483969 GNAI1P63096 354 aa11.57□□□□□ -0.56
COL8A1-207ENST00000483969 PTSQ03393 145 aa11.57□□□□□ -0.56
COL8A1-207ENST00000483969 SMIM5Q71RC9 77 aa11.57□□□□□ -0.56
COL8A1-207ENST00000483969 ADAM32Q8TC27 787 aa11.57□□□□□ -0.56
COL8A1-207ENST00000483969 ADAMTS7Q9UKP4 1686 aa11.56□□□□□ -0.56
COL8A1-207ENST00000483969 A1BGP04217 495 aa11.56□□□□□ -0.56
COL8A1-207ENST00000483969 IL6STP40189 918 aaPredicted RBP11.56□□□□□ -0.56
COL8A1-207ENST00000483969 AMIGO3Q86WK7 504 aa11.56□□□□□ -0.56
COL8A1-207ENST00000483969 ARXQ96QS3 562 aa11.56□□□□□ -0.56
COL8A1-207ENST00000483969 OCSTAMPQ9BR26 566 aa11.56□□□□□ -0.56
COL8A1-207ENST00000483969 IFT57Q9NWB7 429 aa11.56□□□□□ -0.56
COL8A1-207ENST00000483969 ZBTB1Q9Y2K1 713 aa11.56□□□□□ -0.56
COL8A1-207ENST00000483969 LY75O60449 1722 aa11.55□□□□□ -0.56
COL8A1-207ENST00000483969 USP17L8P0C7I0 530 aa11.55□□□□□ -0.56
COL8A1-207ENST00000483969 EIF5P55010 431 aaKnown RBP11.55□□□□□ -0.56
COL8A1-207ENST00000483969 WWC1Q8IX03 1113 aa11.55□□□□□ -0.56
COL8A1-207ENST00000483969 PAPPAQ13219 1627 aa11.55□□□□□ -0.56
COL8A1-207ENST00000483969 ITGB4P16144 1822 aa11.55□□□□□ -0.56
COL8A1-207ENST00000483969 SOS1Q07889 1333 aaPredicted RBP11.55□□□□□ -0.56
COL8A1-207ENST00000483969 KCPQ6ZWJ8 1503 aa11.55□□□□□ -0.56
COL8A1-207ENST00000483969 SCN11AQ9UI33 1791 aa11.54□□□□□ -0.56
COL8A1-207ENST00000483969 PRAMEF22A3QJZ6 481 aa11.54□□□□□ -0.56
COL8A1-207ENST00000483969 ZNF853P0CG23 659 aa11.54□□□□□ -0.56
COL8A1-207ENST00000483969 MSL1Q68DK7 614 aa11.54□□□□□ -0.56
COL8A1-207ENST00000483969 WDR63Q8IWG1 891 aa11.54□□□□□ -0.56
COL8A1-207ENST00000483969 CHMP4AQ9BY43 222 aa11.54□□□□□ -0.56
COL8A1-207ENST00000483969 NARFQ9UHQ1 456 aa11.54□□□□□ -0.56
COL8A1-207ENST00000483969 ZNF330Q9Y3S2 320 aaPredicted RBP11.54□□□□□ -0.56
COL8A1-207ENST00000483969 KAT6BQ8WYB5 2073 aa11.54□□□□□ -0.56
COL8A1-207ENST00000483969 GYS1P13807 737 aa11.53□□□□□ -0.56
COL8A1-207ENST00000483969 IL16Q14005 1332 aa11.53□□□□□ -0.56
COL8A1-207ENST00000483969 C4BP0C0L5 1744 aa11.52□□□□□ -0.56
COL8A1-207ENST00000483969 SENP3-EIF4A1A0A087X0R7 540 aa11.52□□□□□ -0.57
COL8A1-207ENST00000483969 FIGNL2A6NMB9 653 aa11.52□□□□□ -0.57
COL8A1-207ENST00000483969 EIF2S2P20042 333 aaKnown RBP11.52□□□□□ -0.57
COL8A1-207ENST00000483969 USPL1Q5W0Q7 1092 aa11.52□□□□□ -0.57
COL8A1-207ENST00000483969 NANOS1Q8WY41 292 aaKnown RBP11.52□□□□□ -0.57
COL8A1-207ENST00000483969 MBIPQ9NS73 344 aa11.52□□□□□ -0.57
COL8A1-207ENST00000483969 SRP68Q9UHB9 627 aaKnown RBP11.52□□□□□ -0.57
COL8A1-207ENST00000483969 PARP3Q9Y6F1 533 aa11.52□□□□□ -0.57
COL8A1-207ENST00000483969 USP42Q9H9J4 1324 aaKnown RBP11.52□□□□□ -0.57
COL8A1-207ENST00000483969 HOXB7P09629 217 aa11.51□□□□□ -0.57
COL8A1-207ENST00000483969 DZIP3Q86Y13 1208 aaKnown RBP11.51□□□□□ -0.57
COL8A1-207ENST00000483969 CCDC155Q8N6L0 562 aa11.51□□□□□ -0.57
COL8A1-207ENST00000483969 HMX1Q9NP08 348 aaPredicted RBP11.51□□□□□ -0.57
COL8A1-207ENST00000483969 TBC1D2BQ9UPU7 963 aa11.51□□□□□ -0.57
COL8A1-207ENST00000483969 ZNF831Q5JPB2 1677 aa11.51□□□□□ -0.57
COL8A1-207ENST00000483969 COL15A1P39059 1388 aa11.51□□□□□ -0.57
COL8A1-207ENST00000483969 MMP10P09238 476 aa11.5□□□□□ -0.57
COL8A1-207ENST00000483969 RELBQ01201 579 aa11.5□□□□□ -0.57
COL8A1-207ENST00000483969 DUSP27Q5VZP5 1158 aa11.5□□□□□ -0.57
COL8A1-207ENST00000483969 NBPF10Q6P3W6 841 aaKnown RBP11.5□□□□□ -0.57
COL8A1-207ENST00000483969 NBPF15Q8N660 670 aa11.5□□□□□ -0.57
COL8A1-207ENST00000483969 EPS8L1Q8TE68 723 aa11.5□□□□□ -0.57
COL8A1-207ENST00000483969 AGBL1Q96MI9 1066 aa11.5□□□□□ -0.57
COL8A1-207ENST00000483969 SYT17Q9BSW7 474 aa11.5□□□□□ -0.57
COL8A1-207ENST00000483969 FHDC1Q9C0D6 1143 aaPredicted RBP11.5□□□□□ -0.57
COL8A1-207ENST00000483969 C5P01031 1676 aa11.49□□□□□ -0.57
COL8A1-207ENST00000483969 MYL6BP14649 208 aa11.49□□□□□ -0.57
COL8A1-207ENST00000483969 TM4SF1P30408 202 aa11.49□□□□□ -0.57
COL8A1-207ENST00000483969 RFC5P40937 340 aa11.49□□□□□ -0.57
COL8A1-207ENST00000483969 PIP4K2AP48426 406 aaPredicted RBP11.49□□□□□ -0.57
COL8A1-207ENST00000483969 POLMQ9NP87 494 aaPredicted RBP11.49□□□□□ -0.57
COL8A1-207ENST00000483969 ZNF652Q9Y2D9 606 aa11.49□□□□□ -0.57
COL8A1-207ENST00000483969 CD2APQ9Y5K6 639 aa11.49□□□□□ -0.57
COL8A1-207ENST00000483969 SLC35F4A4IF30 521 aa11.48□□□□□ -0.57
COL8A1-207ENST00000483969 ELL2O00472 640 aaPredicted RBP11.48□□□□□ -0.57
COL8A1-207ENST00000483969 ADH1AP07327 375 aa11.48□□□□□ -0.57
COL8A1-207ENST00000483969 CTSOP43234 321 aaPredicted RBP11.48□□□□□ -0.57
COL8A1-207ENST00000483969 KRT24Q2M2I5 525 aa11.48□□□□□ -0.57
COL8A1-207ENST00000483969 HDGFL1Q5TGJ6 251 aa11.48□□□□□ -0.57
COL8A1-207ENST00000483969 CLEC4GQ6UXB4 293 aa11.48□□□□□ -0.57
COL8A1-207ENST00000483969 KIF6Q6ZMV9 814 aa11.48□□□□□ -0.57
COL8A1-207ENST00000483969 ZNF784Q8NCA9 323 aaPredicted RBP11.48□□□□□ -0.57
COL8A1-207ENST00000483969 INSM2Q96T92 566 aaPredicted RBP11.48□□□□□ -0.57
COL8A1-207ENST00000483969 MYH16Q9H6N6 1097 aa11.48□□□□□ -0.57
COL8A1-207ENST00000483969 GOPCQ9HD26 462 aa11.48□□□□□ -0.57
COL8A1-207ENST00000483969 DBF4Q9UBU7 674 aaPredicted RBP11.48□□□□□ -0.57
COL8A1-207ENST00000483969 ERVV-1B6SEH8 477 aa11.47□□□□□ -0.57
COL8A1-207ENST00000483969 CAMTA2O94983 1202 aa11.47□□□□□ -0.57
COL8A1-207ENST00000483969 KRT76Q01546 638 aa11.47□□□□□ -0.57
COL8A1-207ENST00000483969 C8orf58Q8NAV2 365 aa11.47□□□□□ -0.57
COL8A1-207ENST00000483969 SETDB2Q96T68 719 aa11.47□□□□□ -0.57
COL8A1-207ENST00000483969 DDX21Q9NR30 783 aaKnown RBP eCLIP11.47□□□□□ -0.57
COL8A1-207ENST00000483969 CASZ1Q86V15 1759 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms