RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 IGSF22Q8N9C0 903 aa8.96□□□□□ -0.97
COL4A5-205ENST00000483338 BCAS4Q8TDM0 211 aa8.96□□□□□ -0.97
COL4A5-205ENST00000483338 EZH1Q92800 747 aaPredicted RBP8.96□□□□□ -0.97
COL4A5-205ENST00000483338 DHX58Q96C10 678 aa8.96□□□□□ -0.97
COL4A5-205ENST00000483338 MMTAG2Q9BU76 263 aaKnown RBP8.96□□□□□ -0.97
COL4A5-205ENST00000483338 TMX4Q9H1E5 349 aaPredicted RBP8.96□□□□□ -0.97
COL4A5-205ENST00000483338 ATP6V0A4Q9HBG4 840 aa8.96□□□□□ -0.97
COL4A5-205ENST00000483338 MYOM2P54296 1465 aa8.96□□□□□ -0.98
COL4A5-205ENST00000483338 A0A087WWV3 80 aa8.96□□□□□ -0.98
COL4A5-205ENST00000483338 CDKL5O76039 1030 aa8.96□□□□□ -0.98
COL4A5-205ENST00000483338 IMPDH2P12268 514 aa8.96□□□□□ -0.98
COL4A5-205ENST00000483338 AMOTQ4VCS5 1084 aa8.96□□□□□ -0.98
COL4A5-205ENST00000483338 IL17RAQ96F46 866 aa8.96□□□□□ -0.98
COL4A5-205ENST00000483338 ESYT1Q9BSJ8 1104 aa8.96□□□□□ -0.98
COL4A5-205ENST00000483338 CARD14Q9BXL6 1004 aa8.96□□□□□ -0.98
COL4A5-205ENST00000483338 TTC21AQ8NDW8 1320 aa8.96□□□□□ -0.98
COL4A5-205ENST00000483338 BECN2A8MW95 431 aa8.95□□□□□ -0.98
COL4A5-205ENST00000483338 ZSCAN9O15535 394 aaPredicted RBP8.95□□□□□ -0.98
COL4A5-205ENST00000483338 ERLIN1O75477 346 aa8.95□□□□□ -0.98
COL4A5-205ENST00000483338 CD151P48509 253 aa8.95□□□□□ -0.98
COL4A5-205ENST00000483338 SMTNP53814 917 aa8.95□□□□□ -0.98
COL4A5-205ENST00000483338 TXNDC2Q86VQ3 553 aa8.95□□□□□ -0.98
COL4A5-205ENST00000483338 MSANTD4Q8NCY6 345 aa8.95□□□□□ -0.98
COL4A5-205ENST00000483338 CENPHQ9H3R5 247 aa8.95□□□□□ -0.98
COL4A5-205ENST00000483338 HOMER3Q9NSC5 361 aa8.95□□□□□ -0.98
COL4A5-205ENST00000483338 INO80Q9ULG1 1556 aaPredicted RBP8.95□□□□□ -0.98
COL4A5-205ENST00000483338 ABCA6Q8N139 1617 aa8.95□□□□□ -0.98
COL4A5-205ENST00000483338 ATXN2Q99700 1313 aaKnown RBP8.95□□□□□ -0.98
COL4A5-205ENST00000483338 ZEB2O60315 1214 aa8.95□□□□□ -0.98
COL4A5-205ENST00000483338 SPATA21Q7Z572 469 aa8.95□□□□□ -0.98
COL4A5-205ENST00000483338 MYLK4Q86YV6 388 aaPredicted RBP8.95□□□□□ -0.98
COL4A5-205ENST00000483338 THEMISQ8N1K5 641 aaPredicted RBP8.95□□□□□ -0.98
COL4A5-205ENST00000483338 KIFC2Q96AC6 838 aa8.95□□□□□ -0.98
COL4A5-205ENST00000483338 PLEKHG4BQ96PX9 1271 aa8.95□□□□□ -0.98
COL4A5-205ENST00000483338 SLX1AQ9BQ83 275 aa8.95□□□□□ -0.98
COL4A5-205ENST00000483338 CROCC2H7BZ55 1655 aa8.95□□□□□ -0.98
COL4A5-205ENST00000483338 IL16Q14005 1332 aa8.95□□□□□ -0.98
COL4A5-205ENST00000483338 VPS37CA5D8V6 355 aaPredicted RBP8.95□□□□□ -0.98
COL4A5-205ENST00000483338 OATP04181 439 aa8.95□□□□□ -0.98
COL4A5-205ENST00000483338 SETSIPP0DME0 302 aa8.95□□□□□ -0.98
COL4A5-205ENST00000483338 EZRP15311 586 aaKnown RBP8.95□□□□□ -0.98
COL4A5-205ENST00000483338 AARSP49588 968 aaKnown RBP eCLIP8.95□□□□□ -0.98
COL4A5-205ENST00000483338 CHMP4BP1P59074 171 aa8.95□□□□□ -0.98
COL4A5-205ENST00000483338 VSNL1P62760 191 aa8.95□□□□□ -0.98
COL4A5-205ENST00000483338 KRT85P78386 507 aa8.95□□□□□ -0.98
COL4A5-205ENST00000483338 LAMB3Q13751 1172 aa8.95□□□□□ -0.98
COL4A5-205ENST00000483338 TSPAN18Q96SJ8 248 aa8.95□□□□□ -0.98
COL4A5-205ENST00000483338 RMI1Q9H9A7 625 aa8.95□□□□□ -0.98
COL4A5-205ENST00000483338 GRIN2DO15399 1336 aa8.95□□□□□ -0.98
COL4A5-205ENST00000483338 POLD1P28340 1107 aa8.94□□□□□ -0.98
COL4A5-205ENST00000483338 GJB2P29033 226 aa8.94□□□□□ -0.98
COL4A5-205ENST00000483338 GBP2P32456 591 aaPredicted RBP8.94□□□□□ -0.98
COL4A5-205ENST00000483338 GNG11P61952 73 aa8.94□□□□□ -0.98
COL4A5-205ENST00000483338 SETDB1Q15047 1291 aa8.94□□□□□ -0.98
COL4A5-205ENST00000483338 E2F5Q15329 346 aa8.94□□□□□ -0.98
COL4A5-205ENST00000483338 KIAA1328Q86T90 577 aa8.94□□□□□ -0.98
COL4A5-205ENST00000483338 SMARCC1Q92922 1105 aaPredicted RBP8.94□□□□□ -0.98
COL4A5-205ENST00000483338 MKL1Q969V6 931 aa8.94□□□□□ -0.98
COL4A5-205ENST00000483338 ZNF396Q96N95 335 aaPredicted RBP8.94□□□□□ -0.98
COL4A5-205ENST00000483338 SLC39A2Q9NP94 309 aa8.94□□□□□ -0.98
COL4A5-205ENST00000483338 ANO2Q9NQ90 1003 aa8.94□□□□□ -0.98
COL4A5-205ENST00000483338 EIF2AK4Q9P2K8 1649 aaKnown RBP8.94□□□□□ -0.98
COL4A5-205ENST00000483338 RICTORQ6R327 1708 aa8.94□□□□□ -0.98
COL4A5-205ENST00000483338 TNRQ92752 1358 aa8.94□□□□□ -0.98
COL4A5-205ENST00000483338 PIK3R4Q99570 1358 aa8.94□□□□□ -0.98
COL4A5-205ENST00000483338 H7C1W4 665 aa8.94□□□□□ -0.98
COL4A5-205ENST00000483338 RIN2Q8WYP3 895 aaPredicted RBP8.94□□□□□ -0.98
COL4A5-205ENST00000483338 TSGA10Q9BZW7 698 aa8.94□□□□□ -0.98
COL4A5-205ENST00000483338 TPCN1Q9ULQ1 816 aa8.94□□□□□ -0.98
COL4A5-205ENST00000483338 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.94□□□□□ -0.98
COL4A5-205ENST00000483338 ADGRB2O60241 1585 aa8.94□□□□□ -0.98
COL4A5-205ENST00000483338 NPHP3Q7Z494 1330 aa8.94□□□□□ -0.98
COL4A5-205ENST00000483338 CEP152O94986 1710 aa8.94□□□□□ -0.98
COL4A5-205ENST00000483338 NPATQ14207 1427 aa8.94□□□□□ -0.98
COL4A5-205ENST00000483338 SHTN1A0MZ66 631 aa8.94□□□□□ -0.98
COL4A5-205ENST00000483338 MEFVO15553 781 aaPredicted RBP8.94□□□□□ -0.98
COL4A5-205ENST00000483338 WDHD1O75717 1129 aaPredicted RBP8.94□□□□□ -0.98
COL4A5-205ENST00000483338 LARGE1O95461 756 aa8.94□□□□□ -0.98
COL4A5-205ENST00000483338 RANBP1P43487 201 aa8.94□□□□□ -0.98
COL4A5-205ENST00000483338 CCDC40Q4G0X9 1142 aa8.94□□□□□ -0.98
COL4A5-205ENST00000483338 RUFY3Q7L099 469 aa8.94□□□□□ -0.98
COL4A5-205ENST00000483338 RBM12BQ8IXT5 1001 aaKnown RBP8.94□□□□□ -0.98
COL4A5-205ENST00000483338 B4GALNT2Q8NHY0 566 aa8.94□□□□□ -0.98
COL4A5-205ENST00000483338 XPO4Q9C0E2 1151 aaKnown RBP8.94□□□□□ -0.98
COL4A5-205ENST00000483338 TMEM165Q9HC07 324 aa8.94□□□□□ -0.98
COL4A5-205ENST00000483338 GOLGA6L4A6NEF3 574 aa8.93□□□□□ -0.98
COL4A5-205ENST00000483338 SPDYE3A6NKU9 549 aa8.93□□□□□ -0.98
COL4A5-205ENST00000483338 ELL2O00472 640 aaPredicted RBP8.93□□□□□ -0.98
COL4A5-205ENST00000483338 STX1AQ16623 288 aa8.93□□□□□ -0.98
COL4A5-205ENST00000483338 ALDH1L2Q3SY69 923 aa8.93□□□□□ -0.98
COL4A5-205ENST00000483338 FERMT3Q86UX7 667 aa8.93□□□□□ -0.98
COL4A5-205ENST00000483338 AOPEPQ8N6M6 819 aa8.93□□□□□ -0.98
COL4A5-205ENST00000483338 EPAS1Q99814 870 aa8.93□□□□□ -0.98
COL4A5-205ENST00000483338 NAT10Q9H0A0 1025 aaKnown RBP8.93□□□□□ -0.98
COL4A5-205ENST00000483338 SLC40A1Q9NP59 571 aa8.93□□□□□ -0.98
COL4A5-205ENST00000483338 EPB41L2O43491 1005 aaKnown RBP8.93□□□□□ -0.98
COL4A5-205ENST00000483338 ZNF202O95125 648 aa8.93□□□□□ -0.98
COL4A5-205ENST00000483338 SNCBQ16143 134 aa8.93□□□□□ -0.98
COL4A5-205ENST00000483338 CCDC181Q5TID7 509 aa8.93□□□□□ -0.98
COL4A5-205ENST00000483338 SRGAP1Q7Z6B7 1085 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms