RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 ZNF396Q96N95 335 aaPredicted RBP13.66□□□□□ -0.22
VTI1A-205ENST00000483122 NEK1Q96PY6 1258 aa13.66□□□□□ -0.22
VTI1A-205ENST00000483122 FSD1Q9BTV5 496 aa13.66□□□□□ -0.22
VTI1A-205ENST00000483122 HSD3B7Q9H2F3 369 aa13.66□□□□□ -0.22
VTI1A-205ENST00000483122 BOLA2Q9H3K6 86 aa13.66□□□□□ -0.22
VTI1A-205ENST00000483122 PPP2R2CQ9Y2T4 447 aa13.66□□□□□ -0.22
VTI1A-205ENST00000483122 EIF3CLB5ME19 914 aaKnown RBP13.65□□□□□ -0.22
VTI1A-205ENST00000483122 N4BP1O75113 896 aaKnown RBP13.65□□□□□ -0.22
VTI1A-205ENST00000483122 CTDNEP1O95476 244 aa13.65□□□□□ -0.22
VTI1A-205ENST00000483122 IVLP07476 585 aa13.65□□□□□ -0.22
VTI1A-205ENST00000483122 DHX8Q14562 1220 aaKnown RBP13.65□□□□□ -0.22
VTI1A-205ENST00000483122 NOM1Q5C9Z4 860 aaKnown RBP13.65□□□□□ -0.22
VTI1A-205ENST00000483122 EIF3CQ99613 913 aaKnown RBP13.65□□□□□ -0.22
VTI1A-205ENST00000483122 TLR7Q9NYK1 1049 aaKnown RBP13.65□□□□□ -0.22
VTI1A-205ENST00000483122 ANKARQ7Z5J8 1434 aa13.65□□□□□ -0.22
VTI1A-205ENST00000483122 NLRP12P59046 1061 aa13.65□□□□□ -0.22
VTI1A-205ENST00000483122 APOBRQ0VD83 1088 aa13.65□□□□□ -0.22
VTI1A-205ENST00000483122 ERC1Q8IUD2 1116 aa13.65□□□□□ -0.22
VTI1A-205ENST00000483122 ZSWIM4Q9H7M6 989 aa13.65□□□□□ -0.22
VTI1A-205ENST00000483122 BRMS1Q9HCU9 246 aa13.65□□□□□ -0.22
VTI1A-205ENST00000483122 HMG20BQ9P0W2 317 aa13.65□□□□□ -0.22
VTI1A-205ENST00000483122 ABCC6O95255 1503 aa13.64□□□□□ -0.23
VTI1A-205ENST00000483122 TMEM232C9JQI7 657 aa13.64□□□□□ -0.23
VTI1A-205ENST00000483122 ZSCAN12O43309 604 aa13.64□□□□□ -0.23
VTI1A-205ENST00000483122 TAF5LO75529 589 aa13.64□□□□□ -0.23
VTI1A-205ENST00000483122 ATF3P18847 181 aa13.64□□□□□ -0.23
VTI1A-205ENST00000483122 EIF2S2P20042 333 aaKnown RBP13.64□□□□□ -0.23
VTI1A-205ENST00000483122 MCM6Q14566 821 aa13.64□□□□□ -0.23
VTI1A-205ENST00000483122 CADPS2Q86UW7 1296 aa13.64□□□□□ -0.23
VTI1A-205ENST00000483122 TMEM139Q8IV31 216 aa13.64□□□□□ -0.23
VTI1A-205ENST00000483122 GOLGA1Q92805 767 aa13.64□□□□□ -0.23
VTI1A-205ENST00000483122 DHX58Q96C10 678 aa13.64□□□□□ -0.23
VTI1A-205ENST00000483122 EAF2Q96CJ1 260 aaPredicted RBP13.64□□□□□ -0.23
VTI1A-205ENST00000483122 COL15A1P39059 1388 aa13.64□□□□□ -0.23
VTI1A-205ENST00000483122 PRR36Q9H6K5 1346 aa13.64□□□□□ -0.23
VTI1A-205ENST00000483122 TOPAZ1Q8N9V7 1692 aa13.64□□□□□ -0.23
VTI1A-205ENST00000483122 PTPDC1A2A3K4 754 aa13.64□□□□□ -0.23
VTI1A-205ENST00000483122 PI4KAP2A4QPH2 592 aa13.64□□□□□ -0.23
VTI1A-205ENST00000483122 TXLNAP40222 546 aa13.64□□□□□ -0.23
VTI1A-205ENST00000483122 PI4KAP1Q8N8J0 262 aa13.64□□□□□ -0.23
VTI1A-205ENST00000483122 KIFC2Q96AC6 838 aa13.64□□□□□ -0.23
VTI1A-205ENST00000483122 LRRC37A3O60309 1634 aa13.64□□□□□ -0.23
VTI1A-205ENST00000483122 JCADQ9P266 1359 aa13.64□□□□□ -0.23
VTI1A-205ENST00000483122 CCDC151A5D8V7 595 aa13.63□□□□□ -0.23
VTI1A-205ENST00000483122 UBASH3AP57075 661 aa13.63□□□□□ -0.23
VTI1A-205ENST00000483122 SART3Q15020 963 aaKnown RBP13.63□□□□□ -0.23
VTI1A-205ENST00000483122 DNAAF4Q8WXU2 420 aa13.63□□□□□ -0.23
VTI1A-205ENST00000483122 EDC3Q96F86 508 aaKnown RBP13.63□□□□□ -0.23
VTI1A-205ENST00000483122 NCAPGQ9BPX3 1015 aa13.63□□□□□ -0.23
VTI1A-205ENST00000483122 FAN1Q9Y2M0 1017 aa13.63□□□□□ -0.23
VTI1A-205ENST00000483122 RGPD8O14715 1765 aaPredicted RBP13.63□□□□□ -0.23
VTI1A-205ENST00000483122 OVOS2A0A0J9YW53 1432 aa13.63□□□□□ -0.23
VTI1A-205ENST00000483122 OVOS2Q6IE36 1432 aa13.63□□□□□ -0.23
VTI1A-205ENST00000483122 SLC3A2P08195 630 aaKnown RBP13.63□□□□□ -0.23
VTI1A-205ENST00000483122 ADALQ6DHV7 355 aa13.63□□□□□ -0.23
VTI1A-205ENST00000483122 IL17REQ8NFR9 667 aa13.63□□□□□ -0.23
VTI1A-205ENST00000483122 PFKFB2O60825 505 aa13.62□□□□□ -0.23
VTI1A-205ENST00000483122 RPS6KA5O75582 802 aa13.62□□□□□ -0.23
VTI1A-205ENST00000483122 SASH1O94885 1247 aa13.62□□□□□ -0.23
VTI1A-205ENST00000483122 ANXA1P04083 346 aa13.62□□□□□ -0.23
VTI1A-205ENST00000483122 CCT2P78371 535 aaKnown RBP13.62□□□□□ -0.23
VTI1A-205ENST00000483122 BRD3Q15059 726 aa13.62□□□□□ -0.23
VTI1A-205ENST00000483122 BEND6Q5SZJ8 279 aaPredicted RBP13.62□□□□□ -0.23
VTI1A-205ENST00000483122 FCHSD1Q86WN1 690 aa13.62□□□□□ -0.23
VTI1A-205ENST00000483122 VSTM4Q8IW00 320 aa13.62□□□□□ -0.23
VTI1A-205ENST00000483122 MYCBPQ99417 103 aaPredicted RBP13.62□□□□□ -0.23
VTI1A-205ENST00000483122 EYA1Q99502 592 aa13.62□□□□□ -0.23
VTI1A-205ENST00000483122 SUGCTQ9HAC7 445 aa13.62□□□□□ -0.23
VTI1A-205ENST00000483122 MST1RQ04912 1400 aa13.62□□□□□ -0.23
VTI1A-205ENST00000483122 GNAT3A8MTJ3 354 aa13.62□□□□□ -0.23
VTI1A-205ENST00000483122 ALDH1L1O75891 902 aa13.62□□□□□ -0.23
VTI1A-205ENST00000483122 SERPINC1P01008 464 aa13.62□□□□□ -0.23
VTI1A-205ENST00000483122 CHGBP05060 677 aa13.62□□□□□ -0.23
VTI1A-205ENST00000483122 ATP2B1P20020 1258 aa13.62□□□□□ -0.23
VTI1A-205ENST00000483122 MTX1Q13505 466 aa13.62□□□□□ -0.23
VTI1A-205ENST00000483122 CFAP100Q494V2 611 aa13.62□□□□□ -0.23
VTI1A-205ENST00000483122 USPL1Q5W0Q7 1092 aa13.62□□□□□ -0.23
VTI1A-205ENST00000483122 ATL3Q6DD88 541 aa13.62□□□□□ -0.23
VTI1A-205ENST00000483122 TOGARAM2Q6ZUX3 1019 aa13.62□□□□□ -0.23
VTI1A-205ENST00000483122 LLPHQ9BRT6 129 aaKnown RBP13.62□□□□□ -0.23
VTI1A-205ENST00000483122 PLEKHA4Q9H4M7 779 aa13.62□□□□□ -0.23
VTI1A-205ENST00000483122 NCOA5Q9HCD5 579 aaKnown RBP13.62□□□□□ -0.23
VTI1A-205ENST00000483122 CLIC4Q9Y696 253 aa13.62□□□□□ -0.23
VTI1A-205ENST00000483122 ARHGAP6O43182 974 aa13.61□□□□□ -0.23
VTI1A-205ENST00000483122 TOP1P11387 765 aaKnown RBP13.61□□□□□ -0.23
VTI1A-205ENST00000483122 KRT32Q14532 448 aa13.61□□□□□ -0.23
VTI1A-205ENST00000483122 JAKMIP3Q5VZ66 844 aa13.61□□□□□ -0.23
VTI1A-205ENST00000483122 WWC2Q6AWC2 1192 aa13.61□□□□□ -0.23
VTI1A-205ENST00000483122 LRRC31Q6UY01 552 aa13.61□□□□□ -0.23
VTI1A-205ENST00000483122 CCDC129Q6ZRS4 1044 aa13.61□□□□□ -0.23
VTI1A-205ENST00000483122 CERKQ8TCT0 537 aa13.61□□□□□ -0.23
VTI1A-205ENST00000483122 ANKZF1Q9H8Y5 726 aa13.61□□□□□ -0.23
VTI1A-205ENST00000483122 A0A1W2PQ27 194 aa13.61□□□□□ -0.23
VTI1A-205ENST00000483122 A0A1W2PQ64 194 aa13.61□□□□□ -0.23
VTI1A-205ENST00000483122 A0A1W2PQD8 194 aa13.61□□□□□ -0.23
VTI1A-205ENST00000483122 CORO7P57737 925 aa13.61□□□□□ -0.23
VTI1A-205ENST00000483122 KARSQ15046 597 aaKnown RBP13.61□□□□□ -0.23
VTI1A-205ENST00000483122 PNKPQ96T60 521 aa13.61□□□□□ -0.23
VTI1A-205ENST00000483122 CHPF2Q9P2E5 772 aa13.61□□□□□ -0.23
VTI1A-205ENST00000483122 AKAP2Q9Y2D5 859 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms