RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 EDC4Q6P2E9 1401 aaKnown RBP9.82□□□□□ -0.84
SNX13-208ENST00000482558 CD163L1Q9NR16 1453 aa9.81□□□□□ -0.84
SNX13-208ENST00000482558 FYB1O15117 783 aa9.81□□□□□ -0.84
SNX13-208ENST00000482558 EPXP11678 715 aa9.81□□□□□ -0.84
SNX13-208ENST00000482558 FGFR3P22607 806 aa9.81□□□□□ -0.84
SNX13-208ENST00000482558 PHKA2P46019 1235 aa9.81□□□□□ -0.84
SNX13-208ENST00000482558 EML3Q32P44 896 aa9.81□□□□□ -0.84
SNX13-208ENST00000482558 CD163Q86VB7 1156 aa9.81□□□□□ -0.84
SNX13-208ENST00000482558 BTBD6Q96KE9 485 aa9.81□□□□□ -0.84
SNX13-208ENST00000482558 FHDC1Q9C0D6 1143 aaPredicted RBP9.81□□□□□ -0.84
SNX13-208ENST00000482558 MAPK8IP3Q9UPT6 1336 aa9.81□□□□□ -0.84
SNX13-208ENST00000482558 ADGRB2O60241 1585 aa9.8□□□□□ -0.84
SNX13-208ENST00000482558 KIF20BQ96Q89 1820 aa9.8□□□□□ -0.84
SNX13-208ENST00000482558 PLEKHG1Q9ULL1 1385 aa9.8□□□□□ -0.84
SNX13-208ENST00000482558 U2AF1L5P0DN76 240 aaPredicted RBP9.8□□□□□ -0.84
SNX13-208ENST00000482558 ARAFP10398 606 aa9.8□□□□□ -0.84
SNX13-208ENST00000482558 MSX1P28360 303 aa9.8□□□□□ -0.84
SNX13-208ENST00000482558 ANP32AP39687 249 aaKnown RBP9.8□□□□□ -0.84
SNX13-208ENST00000482558 U2AF1Q01081 240 aaKnown RBP eCLIP9.8□□□□□ -0.84
SNX13-208ENST00000482558 CALD1Q05682 793 aaKnown RBP9.8□□□□□ -0.84
SNX13-208ENST00000482558 SAFB2Q14151 953 aaKnown RBP eCLIP9.8□□□□□ -0.84
SNX13-208ENST00000482558 MLECQ14165 292 aa9.8□□□□□ -0.84
SNX13-208ENST00000482558 TMEM214Q6NUQ4 689 aaKnown RBP9.8□□□□□ -0.84
SNX13-208ENST00000482558 CRBNQ96SW2 442 aa9.8□□□□□ -0.84
SNX13-208ENST00000482558 ANP32EQ9BTT0 268 aa9.8□□□□□ -0.84
SNX13-208ENST00000482558 CRISPLD1Q9H336 500 aa9.8□□□□□ -0.84
SNX13-208ENST00000482558 RUBCNLQ9H714 662 aa9.8□□□□□ -0.84
SNX13-208ENST00000482558 CDC42BPGQ6DT37 1551 aa9.8□□□□□ -0.84
SNX13-208ENST00000482558 AATKQ6ZMQ8 1374 aa9.79□□□□□ -0.84
SNX13-208ENST00000482558 NRXN3Q9Y4C0 1643 aa9.79□□□□□ -0.84
SNX13-208ENST00000482558 LZTS3O60299 673 aaPredicted RBP9.79□□□□□ -0.84
SNX13-208ENST00000482558 DIAPH1O60610 1272 aaKnown RBP9.79□□□□□ -0.84
SNX13-208ENST00000482558 MYCP01106 439 aaPredicted RBP9.79□□□□□ -0.84
SNX13-208ENST00000482558 DGKGP49619 791 aa9.79□□□□□ -0.84
SNX13-208ENST00000482558 C4orf17Q53FE4 359 aa9.79□□□□□ -0.84
SNX13-208ENST00000482558 GIPC2Q8TF65 315 aa9.79□□□□□ -0.84
SNX13-208ENST00000482558 ABHD17AQ96GS6 310 aa9.79□□□□□ -0.84
SNX13-208ENST00000482558 CABP1Q9NZU7 370 aa9.79□□□□□ -0.84
SNX13-208ENST00000482558 PPP1R1BQ9UD71 204 aaPredicted RBP9.79□□□□□ -0.84
SNX13-208ENST00000482558 EID1Q9Y6B2 187 aa9.79□□□□□ -0.84
SNX13-208ENST00000482558 CPSF1Q10570 1443 aaKnown RBP9.79□□□□□ -0.84
SNX13-208ENST00000482558 UBR1Q8IWV7 1749 aa9.79□□□□□ -0.84
SNX13-208ENST00000482558 VAMP1P23763 118 aa9.78□□□□□ -0.84
SNX13-208ENST00000482558 TNNT2P45379 298 aaPredicted RBP9.78□□□□□ -0.84
SNX13-208ENST00000482558 OXLD1Q5BKU9 147 aa9.78□□□□□ -0.84
SNX13-208ENST00000482558 ESCO1Q5FWF5 840 aa9.78□□□□□ -0.84
SNX13-208ENST00000482558 CCDC85AQ96PX6 553 aaPredicted RBP9.78□□□□□ -0.84
SNX13-208ENST00000482558 MKRN1Q9UHC7 482 aaKnown RBP9.78□□□□□ -0.84
SNX13-208ENST00000482558 COL3A1P02461 1466 aaPredicted RBP9.78□□□□□ -0.84
SNX13-208ENST00000482558 DIP2AQ14689 1571 aa9.77□□□□□ -0.85
SNX13-208ENST00000482558 BNIP3LO60238 219 aa9.77□□□□□ -0.85
SNX13-208ENST00000482558 CTBSQ01459 385 aa9.77□□□□□ -0.85
SNX13-208ENST00000482558 FIGNL1Q6PIW4 674 aa9.77□□□□□ -0.85
SNX13-208ENST00000482558 PSMD1Q99460 953 aa9.77□□□□□ -0.85
SNX13-208ENST00000482558 KRTAP9-2Q9BYQ4 174 aa9.77□□□□□ -0.85
SNX13-208ENST00000482558 PPIP5K1Q6PFW1 1433 aa9.76□□□□□ -0.85
SNX13-208ENST00000482558 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.76□□□□□ -0.85
SNX13-208ENST00000482558 PLIN1O60240 522 aa9.76□□□□□ -0.85
SNX13-208ENST00000482558 CHRNA4P43681 627 aa9.76□□□□□ -0.85
SNX13-208ENST00000482558 RHBDD1Q8TEB9 315 aa9.76□□□□□ -0.85
SNX13-208ENST00000482558 GGNBP2Q9H3C7 697 aa9.76□□□□□ -0.85
SNX13-208ENST00000482558 KDM2BQ8NHM5 1336 aa9.76□□□□□ -0.85
SNX13-208ENST00000482558 SLIT1O75093 1534 aa9.76□□□□□ -0.85
SNX13-208ENST00000482558 METP08581 1390 aa9.75□□□□□ -0.85
SNX13-208ENST00000482558 FAM196BA6NMK8 535 aa9.75□□□□□ -0.85
SNX13-208ENST00000482558 USP17L15C9J2P7 530 aa9.75□□□□□ -0.85
SNX13-208ENST00000482558 USP17L10C9JJH3 530 aa9.75□□□□□ -0.85
SNX13-208ENST00000482558 USP17L13C9JLJ4 530 aa9.75□□□□□ -0.85
SNX13-208ENST00000482558 USP17L12C9JPN9 530 aa9.75□□□□□ -0.85
SNX13-208ENST00000482558 USP17L11C9JVI0 530 aa9.75□□□□□ -0.85
SNX13-208ENST00000482558 USP17L21D6R901 530 aa9.75□□□□□ -0.85
SNX13-208ENST00000482558 USP17L18D6R9N7 530 aa9.75□□□□□ -0.85
SNX13-208ENST00000482558 USP17L22D6RA61 530 aa9.75□□□□□ -0.85
SNX13-208ENST00000482558 USP17L17D6RBQ6 530 aa9.75□□□□□ -0.85
SNX13-208ENST00000482558 USP17L19D6RCP7 530 aa9.75□□□□□ -0.85
SNX13-208ENST00000482558 USP17L20D6RJB6 530 aa9.75□□□□□ -0.85
SNX13-208ENST00000482558 RARSP54136 660 aaKnown RBP9.75□□□□□ -0.85
SNX13-208ENST00000482558 LMOD3Q0VAK6 560 aa9.75□□□□□ -0.85
SNX13-208ENST00000482558 USP17L24Q0WX57 530 aa9.75□□□□□ -0.85
SNX13-208ENST00000482558 NAALADL2Q58DX5 795 aa9.75□□□□□ -0.85
SNX13-208ENST00000482558 LARP1Q6PKG0 1096 aaKnown RBP9.75□□□□□ -0.85
SNX13-208ENST00000482558 TRIM50Q86XT4 487 aa9.75□□□□□ -0.85
SNX13-208ENST00000482558 THEMISQ8N1K5 641 aaPredicted RBP9.75□□□□□ -0.85
SNX13-208ENST00000482558 PMFBP1Q8TBY8 1022 aa9.75□□□□□ -0.85
SNX13-208ENST00000482558 NUDT16Q96DE0 195 aaKnown RBP9.75□□□□□ -0.85
SNX13-208ENST00000482558 PLEKHF1Q96S99 279 aa9.75□□□□□ -0.85
SNX13-208ENST00000482558 CHMP4BQ9H444 224 aaKnown RBP9.75□□□□□ -0.85
SNX13-208ENST00000482558 NOD1Q9Y239 953 aa9.75□□□□□ -0.85
SNX13-208ENST00000482558 TBX22Q9Y458 520 aa9.75□□□□□ -0.85
SNX13-208ENST00000482558 CDK12Q9NYV4 1490 aaPredicted RBP9.74□□□□□ -0.85
SNX13-208ENST00000482558 ARHGAP23Q9P227 1491 aa9.74□□□□□ -0.85
SNX13-208ENST00000482558 U2SURPO15042 1029 aaKnown RBP9.74□□□□□ -0.85
SNX13-208ENST00000482558 RASA1P20936 1047 aa9.74□□□□□ -0.85
SNX13-208ENST00000482558 ITGB7P26010 798 aa9.74□□□□□ -0.85
SNX13-208ENST00000482558 TMPOP42166 694 aaKnown RBP9.74□□□□□ -0.85
SNX13-208ENST00000482558 TSGA10IPQ3SY00 556 aa9.74□□□□□ -0.85
SNX13-208ENST00000482558 WAPLQ7Z5K2 1190 aa9.74□□□□□ -0.85
SNX13-208ENST00000482558 COG3Q96JB2 828 aa9.74□□□□□ -0.85
SNX13-208ENST00000482558 NOVA2Q9UNW9 492 aaKnown RBP9.74□□□□□ -0.85
SNX13-208ENST00000482558 PIK3R4Q99570 1358 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms