RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 MBIPQ9NS73 344 aa19.28■□□□□ 0.68
HDAC6-224ENST00000481929 CLRN2A0PK11 232 aa19.27■□□□□ 0.68
HDAC6-224ENST00000481929 USP2O75604 605 aaPredicted RBP19.27■□□□□ 0.68
HDAC6-224ENST00000481929 MYCP01106 439 aaPredicted RBP19.27■□□□□ 0.68
HDAC6-224ENST00000481929 ECM29Q5VYK3 1845 aa19.27■□□□□ 0.68
HDAC6-224ENST00000481929 MYH3P11055 1940 aa19.27■□□□□ 0.67
HDAC6-224ENST00000481929 KCNJ4P48050 445 aa19.26■□□□□ 0.67
HDAC6-224ENST00000481929 TAF1CQ15572 869 aaPredicted RBP19.26■□□□□ 0.67
HDAC6-224ENST00000481929 CFAP100Q494V2 611 aa19.26■□□□□ 0.67
HDAC6-224ENST00000481929 RUNDC1Q96C34 613 aa19.26■□□□□ 0.67
HDAC6-224ENST00000481929 OPTNQ96CV9 577 aa19.26■□□□□ 0.67
HDAC6-224ENST00000481929 ELP3Q9H9T3 547 aa19.26■□□□□ 0.67
HDAC6-224ENST00000481929 ZFYVE28Q9HCC9 887 aa19.26■□□□□ 0.67
HDAC6-224ENST00000481929 PCDHAC2Q9Y5I4 1007 aa19.26■□□□□ 0.67
HDAC6-224ENST00000481929 SZT2Q5T011 3432 aa19.26■□□□□ 0.67
HDAC6-224ENST00000481929 SPDYE2BA6NHP3 402 aa19.25■□□□□ 0.67
HDAC6-224ENST00000481929 DLL1O00548 723 aa19.25■□□□□ 0.67
HDAC6-224ENST00000481929 SPDYE6P0CI01 402 aa19.25■□□□□ 0.67
HDAC6-224ENST00000481929 CERS5Q8N5B7 392 aa19.25■□□□□ 0.67
HDAC6-224ENST00000481929 CD209Q9NNX6 404 aa19.25■□□□□ 0.67
HDAC6-224ENST00000481929 MAP3K2Q9Y2U5 619 aa19.25■□□□□ 0.67
HDAC6-224ENST00000481929 F8W031 263 aaPredicted RBP19.24■□□□□ 0.67
HDAC6-224ENST00000481929 ELL2O00472 640 aaPredicted RBP19.24■□□□□ 0.67
HDAC6-224ENST00000481929 SLC17A8Q8NDX2 589 aa19.24■□□□□ 0.67
HDAC6-224ENST00000481929 MS4A4AQ96JQ5 239 aa19.24■□□□□ 0.67
HDAC6-224ENST00000481929 MPHOSPH8Q99549 860 aa19.24■□□□□ 0.67
HDAC6-224ENST00000481929 IGKV5-2P06315 115 aa19.23■□□□□ 0.67
HDAC6-224ENST00000481929 RASA3Q14644 834 aa19.23■□□□□ 0.67
HDAC6-224ENST00000481929 SH3TC2Q8TF17 1288 aa19.23■□□□□ 0.67
HDAC6-224ENST00000481929 BRI3BPQ8WY22 251 aa19.23■□□□□ 0.67
HDAC6-224ENST00000481929 RBM27Q9P2N5 1060 aaKnown RBP19.23■□□□□ 0.67
HDAC6-224ENST00000481929 OTOFQ9HC10 1997 aa19.23■□□□□ 0.67
HDAC6-224ENST00000481929 CCL15-CCL14A0A0B4J2E2 113 aa19.22■□□□□ 0.67
HDAC6-224ENST00000481929 WDHD1O75717 1129 aaPredicted RBP19.22■□□□□ 0.67
HDAC6-224ENST00000481929 NEXNQ0ZGT2 675 aa19.22■□□□□ 0.67
HDAC6-224ENST00000481929 CCL15Q16663 113 aa19.22■□□□□ 0.67
HDAC6-224ENST00000481929 DPF3Q92784 378 aa19.22■□□□□ 0.67
HDAC6-224ENST00000481929 PRMT6Q96LA8 375 aaPredicted RBP19.22■□□□□ 0.67
HDAC6-224ENST00000481929 ITGA6P23229 1130 aa19.21■□□□□ 0.67
HDAC6-224ENST00000481929 GTF2A2P52657 109 aa19.21■□□□□ 0.67
HDAC6-224ENST00000481929 RBM5P52756 815 aaKnown RBP eCLIP19.21■□□□□ 0.67
HDAC6-224ENST00000481929 TNFAIP1Q13829 316 aa19.21■□□□□ 0.67
HDAC6-224ENST00000481929 KIF22Q14807 665 aa19.21■□□□□ 0.67
HDAC6-224ENST00000481929 RALBP1Q15311 655 aa19.21■□□□□ 0.67
HDAC6-224ENST00000481929 CHMP4AQ9BY43 222 aa19.21■□□□□ 0.67
HDAC6-224ENST00000481929 ZNF853P0CG23 659 aa19.2■□□□□ 0.66
HDAC6-224ENST00000481929 FKBP1AP62942 108 aaKnown RBP19.2■□□□□ 0.66
HDAC6-224ENST00000481929 CHRNDQ07001 517 aa19.2■□□□□ 0.66
HDAC6-224ENST00000481929 WDR43Q15061 677 aaKnown RBP eCLIP19.2■□□□□ 0.66
HDAC6-224ENST00000481929 CCDC30Q5VVM6 783 aa19.2■□□□□ 0.66
HDAC6-224ENST00000481929 KSR2Q6VAB6 950 aa19.2■□□□□ 0.66
HDAC6-224ENST00000481929 UBE3BQ7Z3V4 1068 aa19.2■□□□□ 0.66
HDAC6-224ENST00000481929 AOX1Q06278 1338 aa19.2■□□□□ 0.66
HDAC6-224ENST00000481929 CUL9Q8IWT3 2517 aa19.19■□□□□ 0.66
HDAC6-224ENST00000481929 PI4KAP2A4QPH2 592 aa19.19■□□□□ 0.66
HDAC6-224ENST00000481929 ZNF804AQ7Z570 1209 aa19.19■□□□□ 0.66
HDAC6-224ENST00000481929 FAM43AQ8N2R8 423 aa19.19■□□□□ 0.66
HDAC6-224ENST00000481929 PI4KAP1Q8N8J0 262 aa19.19■□□□□ 0.66
HDAC6-224ENST00000481929 CNKSR2Q8WXI2 1034 aa19.19■□□□□ 0.66
HDAC6-224ENST00000481929 IFT57Q9NWB7 429 aa19.19■□□□□ 0.66
HDAC6-224ENST00000481929 RANBP2P49792 3224 aaKnown RBP19.19■□□□□ 0.66
HDAC6-224ENST00000481929 NEURL1BA8MQ27 555 aa19.18■□□□□ 0.66
HDAC6-224ENST00000481929 GNRH1P01148 92 aa19.18■□□□□ 0.66
HDAC6-224ENST00000481929 GNAI1P63096 354 aa19.18■□□□□ 0.66
HDAC6-224ENST00000481929 CWF19L2Q2TBE0 894 aaKnown RBP19.18■□□□□ 0.66
HDAC6-224ENST00000481929 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.18■□□□□ 0.66
HDAC6-224ENST00000481929 C15orf52Q6ZUT6 534 aaKnown RBP19.18■□□□□ 0.66
HDAC6-224ENST00000481929 ARHGAP39Q9C0H5 1083 aa19.18■□□□□ 0.66
HDAC6-224ENST00000481929 H7C1W4 665 aa19.17■□□□□ 0.66
HDAC6-224ENST00000481929 SNAP23O00161 211 aa19.17■□□□□ 0.66
HDAC6-224ENST00000481929 TLR2O60603 784 aa19.17■□□□□ 0.66
HDAC6-224ENST00000481929 IL1R1P14778 569 aa19.17■□□□□ 0.66
HDAC6-224ENST00000481929 PRMT2P55345 433 aa19.17■□□□□ 0.66
HDAC6-224ENST00000481929 LACTBP83111 547 aaPredicted RBP19.17■□□□□ 0.66
HDAC6-224ENST00000481929 VGLL4Q14135 290 aa19.17■□□□□ 0.66
HDAC6-224ENST00000481929 SHISA4Q96DD7 197 aa19.17■□□□□ 0.66
HDAC6-224ENST00000481929 HTATIP2Q9BUP3 242 aa19.17■□□□□ 0.66
HDAC6-224ENST00000481929 CSADQ9Y600 493 aa19.17■□□□□ 0.66
HDAC6-224ENST00000481929 IRS2Q9Y4H2 1338 aa19.17■□□□□ 0.66
HDAC6-224ENST00000481929 MAP3K9P80192 1104 aa19.16■□□□□ 0.66
HDAC6-224ENST00000481929 CALD1Q05682 793 aaKnown RBP19.16■□□□□ 0.66
HDAC6-224ENST00000481929 SPDYE2Q495Y8 402 aa19.16■□□□□ 0.66
HDAC6-224ENST00000481929 C8orf58Q8NAV2 365 aa19.16■□□□□ 0.66
HDAC6-224ENST00000481929 NKX2-3Q8TAU0 364 aa19.16■□□□□ 0.66
HDAC6-224ENST00000481929 PLA2G12BQ9BX93 195 aa19.16■□□□□ 0.66
HDAC6-224ENST00000481929 ZNF70Q9UC06 446 aaPredicted RBP19.16■□□□□ 0.66
HDAC6-224ENST00000481929 JAG2Q9Y219 1238 aa19.16■□□□□ 0.66
HDAC6-224ENST00000481929 TAF5LO75529 589 aa19.15■□□□□ 0.66
HDAC6-224ENST00000481929 ZCCHC17Q9NP64 241 aaKnown RBP19.15■□□□□ 0.66
HDAC6-224ENST00000481929 ZSWIM8A7E2V4 1837 aa19.15■□□□□ 0.66
HDAC6-224ENST00000481929 CETPP11597 493 aa19.14■□□□□ 0.65
HDAC6-224ENST00000481929 MTFR1Q15390 333 aa19.14■□□□□ 0.65
HDAC6-224ENST00000481929 HELBQ8NG08 1087 aaPredicted RBP19.14■□□□□ 0.65
HDAC6-224ENST00000481929 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.14■□□□□ 0.65
HDAC6-224ENST00000481929 TEPSINQ96N21 525 aa19.14■□□□□ 0.65
HDAC6-224ENST00000481929 PRO3102Q9H379 93 aa19.14■□□□□ 0.65
HDAC6-224ENST00000481929 NR2E3Q9Y5X4 410 aa19.14■□□□□ 0.65
HDAC6-224ENST00000481929 ANKRD18BA2A2Z9 1011 aa19.13■□□□□ 0.65
HDAC6-224ENST00000481929 CSF1RP07333 972 aa19.13■□□□□ 0.65
HDAC6-224ENST00000481929 TNNI2P48788 182 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms