RNA–Protein interactions for RNA: ENST00000481699.1

SHISA4-203, Transcript of shisa family member 4, humanhuman

TSL 3

Gene SHISA4, Length 723 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-203ENST00000481699 RASGRF1Q13972 1273 aa28.12■■■□□ 2.09
SHISA4-203ENST00000481699 SPATA5Q8NB90 893 aa28.12■■■□□ 2.09
SHISA4-203ENST00000481699 DNAJC2Q99543 621 aaKnown RBP28.12■■■□□ 2.09
SHISA4-203ENST00000481699 C9orf131Q5VYM1 1079 aa28.11■■■□□ 2.09
SHISA4-203ENST00000481699 SNRKQ9NRH2 765 aa28.11■■■□□ 2.09
SHISA4-203ENST00000481699 MCAMP43121 646 aa28.1■■■□□ 2.09
SHISA4-203ENST00000481699 EIF6P56537 245 aaKnown RBP28.1■■■□□ 2.09
SHISA4-203ENST00000481699 SKAP1Q86WV1 359 aa28.1■■■□□ 2.09
SHISA4-203ENST00000481699 OSBPL3Q9H4L5 887 aa28.1■■■□□ 2.09
SHISA4-203ENST00000481699 HMG20BQ9P0W2 317 aa28.1■■■□□ 2.09
SHISA4-203ENST00000481699 PRELPP51888 382 aa28.09■■■□□ 2.09
SHISA4-203ENST00000481699 GTF2IP78347 998 aa28.09■■■□□ 2.09
SHISA4-203ENST00000481699 SCARF1Q14162 830 aa28.09■■■□□ 2.09
SHISA4-203ENST00000481699 USP17L3A6NCW0 530 aa28.08■■■□□ 2.09
SHISA4-203ENST00000481699 USP17L4A6NCW7 530 aa28.08■■■□□ 2.09
SHISA4-203ENST00000481699 TTLL5Q6EMB2 1281 aa28.08■■■□□ 2.09
SHISA4-203ENST00000481699 USP17L1Q7RTZ2 530 aa28.08■■■□□ 2.09
SHISA4-203ENST00000481699 WDR66Q8TBY9 1149 aa28.08■■■□□ 2.09
SHISA4-203ENST00000481699 PI4K2BQ8TCG2 481 aa28.08■■■□□ 2.09
SHISA4-203ENST00000481699 HAUS7Q99871 368 aa28.08■■■□□ 2.09
SHISA4-203ENST00000481699 JAG2Q9Y219 1238 aa28.08■■■□□ 2.09
SHISA4-203ENST00000481699 ZAP70P43403 619 aa28.07■■■□□ 2.08
SHISA4-203ENST00000481699 TBC1D22AQ8WUA7 517 aa28.07■■■□□ 2.08
SHISA4-203ENST00000481699 PDS5AQ29RF7 1337 aaKnown RBP28.07■■■□□ 2.08
SHISA4-203ENST00000481699 YDJCA8MPS7 323 aa28.06■■■□□ 2.08
SHISA4-203ENST00000481699 ZBTB22O15209 634 aa28.06■■■□□ 2.08
SHISA4-203ENST00000481699 RAD17O75943 681 aa28.06■■■□□ 2.08
SHISA4-203ENST00000481699 TNIP1Q15025 636 aa28.06■■■□□ 2.08
SHISA4-203ENST00000481699 PI16Q6UXB8 463 aa28.06■■■□□ 2.08
SHISA4-203ENST00000481699 ZGPATQ8N5A5 531 aaKnown RBP28.06■■■□□ 2.08
SHISA4-203ENST00000481699 FAM205AQ6ZU69 1335 aa28.06■■■□□ 2.08
SHISA4-203ENST00000481699 TRIM6-TRIM34B2RNG4 842 aa28.05■■■□□ 2.08
SHISA4-203ENST00000481699 GOLIM4O00461 696 aa28.05■■■□□ 2.08
SHISA4-203ENST00000481699 TTF1Q15361 905 aaPredicted RBP28.05■■■□□ 2.08
SHISA4-203ENST00000481699 STRIP1Q5VSL9 837 aa28.05■■■□□ 2.08
SHISA4-203ENST00000481699 CIAPIN1Q6FI81 312 aa28.05■■■□□ 2.08
SHISA4-203ENST00000481699 PAG1Q9NWQ8 432 aa28.05■■■□□ 2.08
SHISA4-203ENST00000481699 COL4A5P29400 1685 aa28.04■■■□□ 2.08
SHISA4-203ENST00000481699 MAP4K4O95819 1239 aaPredicted RBP28.04■■■□□ 2.08
SHISA4-203ENST00000481699 TTC22Q5TAA0 569 aa28.04■■■□□ 2.08
SHISA4-203ENST00000481699 KCNQ5Q9NR82 932 aa28.04■■■□□ 2.08
SHISA4-203ENST00000481699 NDUFB9Q9Y6M9 179 aa28.04■■■□□ 2.08
SHISA4-203ENST00000481699 FZD9O00144 591 aa28.03■■■□□ 2.08
SHISA4-203ENST00000481699 SPTY2D1Q68D10 685 aaPredicted RBP28.03■■■□□ 2.08
SHISA4-203ENST00000481699 ABCF2Q9UG63 623 aa28.03■■■□□ 2.08
SHISA4-203ENST00000481699 CXCL9Q07325 125 aa28.02■■■□□ 2.08
SHISA4-203ENST00000481699 MFSD14BQ5SR56 506 aa28.02■■■□□ 2.08
SHISA4-203ENST00000481699 CNTROBQ8N137 903 aa28.02■■■□□ 2.08
SHISA4-203ENST00000481699 LRP2BPQ9P2M1 347 aa28.02■■■□□ 2.08
SHISA4-203ENST00000481699 COL1A1P02452 1464 aaPredicted RBP28.02■■■□□ 2.08
SHISA4-203ENST00000481699 PSMD14O00487 310 aa28.01■■■□□ 2.07
SHISA4-203ENST00000481699 RILPL2Q969X0 211 aa28.01■■■□□ 2.07
SHISA4-203ENST00000481699 GJA3Q9Y6H8 435 aa28.01■■■□□ 2.07
SHISA4-203ENST00000481699 CYP2E1P05181 493 aaPredicted RBP28■■■□□ 2.07
SHISA4-203ENST00000481699 DACT2Q5SW24 774 aa28■■■□□ 2.07
SHISA4-203ENST00000481699 CCDC88AQ3V6T2 1871 aa28■■■□□ 2.07
SHISA4-203ENST00000481699 MYO3BQ8WXR4 1341 aa27.99■■■□□ 2.07
SHISA4-203ENST00000481699 SALL1Q9NSC2 1324 aa27.99■■■□□ 2.07
SHISA4-203ENST00000481699 ZC3H4Q9UPT8 1303 aaKnown RBP27.99■■■□□ 2.07
SHISA4-203ENST00000481699 MYH13Q9UKX3 1938 aa27.99■■■□□ 2.07
SHISA4-203ENST00000481699 LDHBP07195 334 aaKnown RBP27.99■■■□□ 2.07
SHISA4-203ENST00000481699 FKBP1AP62942 108 aaKnown RBP27.99■■■□□ 2.07
SHISA4-203ENST00000481699 RSBN1LQ6PCB5 846 aaPredicted RBP27.99■■■□□ 2.07
SHISA4-203ENST00000481699 TBC1D9Q6ZT07 1266 aa27.99■■■□□ 2.07
SHISA4-203ENST00000481699 ERICH6Q7L0X2 663 aa27.99■■■□□ 2.07
SHISA4-203ENST00000481699 EVI5LQ96CN4 794 aa27.99■■■□□ 2.07
SHISA4-203ENST00000481699 EDC3Q96F86 508 aaKnown RBP27.99■■■□□ 2.07
SHISA4-203ENST00000481699 RAI14Q9P0K7 980 aa27.99■■■□□ 2.07
SHISA4-203ENST00000481699 SBF1O95248 1867 aa27.99■■■□□ 2.07
SHISA4-203ENST00000481699 IDH1O75874 414 aaKnown RBP27.98■■■□□ 2.07
SHISA4-203ENST00000481699 VIL1P09327 827 aaKnown RBP27.98■■■□□ 2.07
SHISA4-203ENST00000481699 LRRFIP1Q32MZ4 808 aaKnown RBP27.98■■■□□ 2.07
SHISA4-203ENST00000481699 DPY19L2Q6NUT2 758 aa27.98■■■□□ 2.07
SHISA4-203ENST00000481699 ZNF526Q8TF50 670 aaPredicted RBP27.98■■■□□ 2.07
SHISA4-203ENST00000481699 FSD1Q9BTV5 496 aa27.98■■■□□ 2.07
SHISA4-203ENST00000481699 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.98■■■□□ 2.07
SHISA4-203ENST00000481699 ANTXR1Q9H6X2 564 aa27.98■■■□□ 2.07
SHISA4-203ENST00000481699 ZNF541Q9H0D2 1346 aa27.97■■■□□ 2.07
SHISA4-203ENST00000481699 MAP3K12Q12852 859 aa27.97■■■□□ 2.07
SHISA4-203ENST00000481699 DZIP1Q86YF9 867 aaKnown RBP27.97■■■□□ 2.07
SHISA4-203ENST00000481699 PIH1D3Q9NQM4 214 aaKnown RBP27.97■■■□□ 2.07
SHISA4-203ENST00000481699 SUGT1Q9Y2Z0 365 aa27.97■■■□□ 2.07
SHISA4-203ENST00000481699 DICER1Q9UPY3 1922 aaKnown RBP27.96■■■□□ 2.07
SHISA4-203ENST00000481699 MXD3Q9BW11 206 aa27.96■■■□□ 2.07
SHISA4-203ENST00000481699 TIAM2Q8IVF5 1701 aa27.95■■■□□ 2.07
SHISA4-203ENST00000481699 GSPT1P15170 499 aaKnown RBP27.95■■■□□ 2.06
SHISA4-203ENST00000481699 BMP2KLQ5H9B9 411 aa27.95■■■□□ 2.06
SHISA4-203ENST00000481699 ZSCAN25Q6NSZ9 544 aa27.95■■■□□ 2.06
SHISA4-203ENST00000481699 GPC2Q8N158 579 aa27.95■■■□□ 2.06
SHISA4-203ENST00000481699 KBTBD3Q8NAB2 608 aa27.95■■■□□ 2.06
SHISA4-203ENST00000481699 MAST3O60307 1309 aa27.94■■■□□ 2.06
SHISA4-203ENST00000481699 F8W031 263 aaPredicted RBP27.94■■■□□ 2.06
SHISA4-203ENST00000481699 RPS12P25398 132 aaKnown RBP27.94■■■□□ 2.06
SHISA4-203ENST00000481699 AGBL3Q8NEM8 1001 aa27.94■■■□□ 2.06
SHISA4-203ENST00000481699 GPBP1L1Q9HC44 474 aaPredicted RBP27.94■■■□□ 2.06
SHISA4-203ENST00000481699 AKAP11Q9UKA4 1901 aa27.93■■■□□ 2.06
SHISA4-203ENST00000481699 IGSF3O75054 1194 aa27.93■■■□□ 2.06
SHISA4-203ENST00000481699 SDSP20132 328 aa27.93■■■□□ 2.06
SHISA4-203ENST00000481699 PRDX5P30044 214 aa27.93■■■□□ 2.06
SHISA4-203ENST00000481699 KIAA0825Q8IV33 1275 aa27.93■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms