RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 KLHL23Q8NBE8 558 aa6.56□□□□□ -1.36
CBX3-207ENST00000481300 RGS22Q8NE09 1264 aa6.56□□□□□ -1.36
CBX3-207ENST00000481300 KLHDC7BQ96G42 594 aa6.56□□□□□ -1.36
CBX3-207ENST00000481300 H3BRJ5 948 aa6.55□□□□□ -1.36
CBX3-207ENST00000481300 FAM117BQ6P1L5 589 aa6.55□□□□□ -1.36
CBX3-207ENST00000481300 ARMC10Q8N2F6 343 aa6.55□□□□□ -1.36
CBX3-207ENST00000481300 UBASH3BQ8TF42 649 aa6.55□□□□□ -1.36
CBX3-207ENST00000481300 FAM129BQ96TA1 746 aa6.55□□□□□ -1.36
CBX3-207ENST00000481300 PDE2AO00408 941 aaPredicted RBP6.54□□□□□ -1.36
CBX3-207ENST00000481300 NEFLP07196 543 aa6.54□□□□□ -1.36
CBX3-207ENST00000481300 DUOXA2Q1HG44 320 aa6.54□□□□□ -1.36
CBX3-207ENST00000481300 NBPF11Q86T75 865 aa6.54□□□□□ -1.36
CBX3-207ENST00000481300 PSMG3-AS1Q96PY0 264 aa6.54□□□□□ -1.36
CBX3-207ENST00000481300 SEC31BQ9NQW1 1179 aa6.54□□□□□ -1.36
CBX3-207ENST00000481300 RAXQ9Y2V3 346 aa6.54□□□□□ -1.36
CBX3-207ENST00000481300 EREGO14944 169 aa6.53□□□□□ -1.36
CBX3-207ENST00000481300 TNFRSF21O75509 655 aa6.53□□□□□ -1.36
CBX3-207ENST00000481300 PIP4K2BP78356 416 aa6.53□□□□□ -1.36
CBX3-207ENST00000481300 PLCB3Q01970 1234 aa6.53□□□□□ -1.36
CBX3-207ENST00000481300 SLC51AQ86UW1 340 aa6.53□□□□□ -1.36
CBX3-207ENST00000481300 WNT8BQ93098 351 aa6.53□□□□□ -1.36
CBX3-207ENST00000481300 FAM46AQ96IP4 442 aaKnown RBP6.53□□□□□ -1.36
CBX3-207ENST00000481300 CEP41Q9BYV8 373 aa6.53□□□□□ -1.36
CBX3-207ENST00000481300 SOX13Q9UN79 622 aa6.53□□□□□ -1.36
CBX3-207ENST00000481300 FAM177BA6PVY3 158 aa6.52□□□□□ -1.37
CBX3-207ENST00000481300 GPR182O15218 404 aa6.52□□□□□ -1.37
CBX3-207ENST00000481300 TREHO43280 583 aa6.52□□□□□ -1.37
CBX3-207ENST00000481300 MAPK8P45983 427 aa6.52□□□□□ -1.37
CBX3-207ENST00000481300 HGSNATQ68CP4 663 aa6.52□□□□□ -1.37
CBX3-207ENST00000481300 NPAS4Q8IUM7 802 aa6.52□□□□□ -1.37
CBX3-207ENST00000481300 TMEM102Q8N9M5 508 aaPredicted RBP6.52□□□□□ -1.37
CBX3-207ENST00000481300 PMEPA1Q969W9 287 aa6.52□□□□□ -1.37
CBX3-207ENST00000481300 ALKBH8Q96BT7 664 aaKnown RBP6.52□□□□□ -1.37
CBX3-207ENST00000481300 ZKSCAN3Q9BRR0 538 aa6.52□□□□□ -1.37
CBX3-207ENST00000481300 BCL2L13Q9BXK5 485 aa6.52□□□□□ -1.37
CBX3-207ENST00000481300 NIF3L1Q9GZT8 377 aa6.52□□□□□ -1.37
CBX3-207ENST00000481300 STOML1Q9UBI4 398 aa6.52□□□□□ -1.37
CBX3-207ENST00000481300 FOXD3Q9UJU5 478 aaPredicted RBP6.52□□□□□ -1.37
CBX3-207ENST00000481300 DHX15O43143 795 aaKnown RBP6.51□□□□□ -1.37
CBX3-207ENST00000481300 PHACTR2O75167 634 aa6.51□□□□□ -1.37
CBX3-207ENST00000481300 CABP4P57796 275 aa6.51□□□□□ -1.37
CBX3-207ENST00000481300 NLRP12P59046 1061 aa6.51□□□□□ -1.37
CBX3-207ENST00000481300 COL19A1Q14993 1142 aa6.51□□□□□ -1.37
CBX3-207ENST00000481300 UVSSAQ2YD98 709 aa6.51□□□□□ -1.37
CBX3-207ENST00000481300 EAPPQ56P03 285 aaPredicted RBP6.51□□□□□ -1.37
CBX3-207ENST00000481300 SLC7A3Q8WY07 619 aa6.51□□□□□ -1.37
CBX3-207ENST00000481300 UTP4Q969X6 686 aaKnown RBP6.51□□□□□ -1.37
CBX3-207ENST00000481300 NXPE3Q969Y0 559 aa6.51□□□□□ -1.37
CBX3-207ENST00000481300 OSMRQ99650 979 aa6.51□□□□□ -1.37
CBX3-207ENST00000481300 OSGEPQ9NPF4 335 aa6.51□□□□□ -1.37
CBX3-207ENST00000481300 AMOTL2Q9Y2J4 779 aa6.51□□□□□ -1.37
CBX3-207ENST00000481300 IGLV1-40P01703 118 aa6.5□□□□□ -1.37
CBX3-207ENST00000481300 ATP2B2Q01814 1243 aa6.5□□□□□ -1.37
CBX3-207ENST00000481300 VN1R5Q7Z5H4 357 aa6.5□□□□□ -1.37
CBX3-207ENST00000481300 SNX29Q8TEQ0 813 aa6.5□□□□□ -1.37
CBX3-207ENST00000481300 MYRFLQ96LU7 910 aa6.5□□□□□ -1.37
CBX3-207ENST00000481300 BCL11AQ9H165 835 aa6.5□□□□□ -1.37
CBX3-207ENST00000481300 LATS2Q9NRM7 1088 aa6.5□□□□□ -1.37
CBX3-207ENST00000481300 IGHA2P01877 340 aa6.49□□□□□ -1.37
CBX3-207ENST00000481300 P4HBP07237 508 aaKnown RBP6.49□□□□□ -1.37
CBX3-207ENST00000481300 SSTR4P31391 388 aa6.49□□□□□ -1.37
CBX3-207ENST00000481300 CD97P48960 835 aa6.49□□□□□ -1.37
CBX3-207ENST00000481300 FGD1P98174 961 aa6.49□□□□□ -1.37
CBX3-207ENST00000481300 FMR1Q06787 632 aaKnown RBP eCLIP6.49□□□□□ -1.37
CBX3-207ENST00000481300 DSC3Q14574 896 aa6.49□□□□□ -1.37
CBX3-207ENST00000481300 ZNF326Q5BKZ1 582 aaKnown RBP6.49□□□□□ -1.37
CBX3-207ENST00000481300 PEAR1Q5VY43 1037 aaPredicted RBP6.49□□□□□ -1.37
CBX3-207ENST00000481300 BSNDQ8WZ55 320 aa6.49□□□□□ -1.37
CBX3-207ENST00000481300 KRTAP9-2Q9BYQ4 174 aa6.49□□□□□ -1.37
CBX3-207ENST00000481300 C7orf69Q9H7B7 122 aa6.49□□□□□ -1.37
CBX3-207ENST00000481300 HMX2A2RU54 273 aa6.48□□□□□ -1.37
CBX3-207ENST00000481300 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.48□□□□□ -1.37
CBX3-207ENST00000481300 SOX1O00570 391 aaPredicted RBP6.48□□□□□ -1.37
CBX3-207ENST00000481300 GSC2O15499 205 aa6.48□□□□□ -1.37
CBX3-207ENST00000481300 CPNE3O75131 537 aaKnown RBP6.48□□□□□ -1.37
CBX3-207ENST00000481300 MED26O95402 600 aa6.48□□□□□ -1.37
CBX3-207ENST00000481300 EDN3P14138 238 aa6.48□□□□□ -1.37
CBX3-207ENST00000481300 PREPP48147 710 aa6.48□□□□□ -1.37
CBX3-207ENST00000481300 C19orf57Q0VDD7 668 aa6.48□□□□□ -1.37
CBX3-207ENST00000481300 ORC1Q13415 861 aa6.48□□□□□ -1.37
CBX3-207ENST00000481300 ZDHHC13Q8IUH4 622 aa6.48□□□□□ -1.37
CBX3-207ENST00000481300 TRIM42Q8IWZ5 723 aa6.48□□□□□ -1.37
CBX3-207ENST00000481300 GIPC2Q8TF65 315 aa6.48□□□□□ -1.37
CBX3-207ENST00000481300 CSRNP1Q96S65 589 aa6.48□□□□□ -1.37
CBX3-207ENST00000481300 BHLHE41Q9C0J9 482 aaPredicted RBP6.48□□□□□ -1.37
CBX3-207ENST00000481300 RNF208Q9H0X6 261 aa6.48□□□□□ -1.37
CBX3-207ENST00000481300 PNMA6FA0A0J9YX94 578 aa6.47□□□□□ -1.37
CBX3-207ENST00000481300 EIF1AYO14602 144 aaKnown RBP6.47□□□□□ -1.37
CBX3-207ENST00000481300 TGFB1P01137 390 aa6.47□□□□□ -1.37
CBX3-207ENST00000481300 LDHBP07195 334 aaKnown RBP6.47□□□□□ -1.37
CBX3-207ENST00000481300 NFIAQ12857 509 aa6.47□□□□□ -1.37
CBX3-207ENST00000481300 IKBKEQ14164 716 aa6.47□□□□□ -1.37
CBX3-207ENST00000481300 ANKRD34AQ69YU3 496 aa6.47□□□□□ -1.37
CBX3-207ENST00000481300 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.47□□□□□ -1.37
CBX3-207ENST00000481300 FAM20CQ8IXL6 584 aa6.47□□□□□ -1.37
CBX3-207ENST00000481300 RUSC1Q9BVN2 902 aa6.47□□□□□ -1.37
CBX3-207ENST00000481300 DNAJC25Q9H1X3 360 aa6.47□□□□□ -1.37
CBX3-207ENST00000481300 ZFYVE28Q9HCC9 887 aa6.47□□□□□ -1.37
CBX3-207ENST00000481300 PCMTD2Q9NV79 361 aa6.47□□□□□ -1.37
CBX3-207ENST00000481300 METTL12A8MUP2 240 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms