RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 ATP4AP20648 1035 aa9.15□□□□□ -0.94
LRCH3-216ENST00000481048 SMTNP53814 917 aa9.15□□□□□ -0.94
LRCH3-216ENST00000481048 SEMA3FQ13275 785 aa9.15□□□□□ -0.94
LRCH3-216ENST00000481048 NEUROD1Q13562 356 aa9.15□□□□□ -0.94
LRCH3-216ENST00000481048 LINC00114Q6XXX2 140 aa9.15□□□□□ -0.94
LRCH3-216ENST00000481048 TOM1L2Q6ZVM7 507 aa9.15□□□□□ -0.94
LRCH3-216ENST00000481048 ARHGEF25Q86VW2 580 aa9.15□□□□□ -0.94
LRCH3-216ENST00000481048 BTBD6Q96KE9 485 aa9.15□□□□□ -0.94
LRCH3-216ENST00000481048 PUS7Q96PZ0 661 aaKnown RBP9.15□□□□□ -0.94
LRCH3-216ENST00000481048 SERTAD1Q9UHV2 236 aa9.15□□□□□ -0.94
LRCH3-216ENST00000481048 PIK3C2AO00443 1686 aa9.15□□□□□ -0.94
LRCH3-216ENST00000481048 RREB1Q92766 1687 aa9.15□□□□□ -0.94
LRCH3-216ENST00000481048 BCL9O00512 1426 aa9.14□□□□□ -0.95
LRCH3-216ENST00000481048 RGPD3A6NKT7 1758 aaPredicted RBP9.14□□□□□ -0.95
LRCH3-216ENST00000481048 RGPD4Q7Z3J3 1758 aa9.14□□□□□ -0.95
LRCH3-216ENST00000481048 NEURL1BA8MQ27 555 aa9.14□□□□□ -0.95
LRCH3-216ENST00000481048 ATXN7O15265 892 aaPredicted RBP9.14□□□□□ -0.95
LRCH3-216ENST00000481048 ARAFP10398 606 aa9.14□□□□□ -0.95
LRCH3-216ENST00000481048 EPXP11678 715 aa9.14□□□□□ -0.95
LRCH3-216ENST00000481048 DDB1Q16531 1140 aa9.14□□□□□ -0.95
LRCH3-216ENST00000481048 ARSJQ5FYB0 599 aaPredicted RBP9.14□□□□□ -0.95
LRCH3-216ENST00000481048 NLRP8Q86W28 1048 aa9.14□□□□□ -0.95
LRCH3-216ENST00000481048 CARD10Q9BWT7 1032 aa9.14□□□□□ -0.95
LRCH3-216ENST00000481048 SUV39H2Q9H5I1 410 aa9.14□□□□□ -0.95
LRCH3-216ENST00000481048 ABCC6O95255 1503 aa9.14□□□□□ -0.95
LRCH3-216ENST00000481048 OVOS2A0A0G2JMS6 1433 aa9.14□□□□□ -0.95
LRCH3-216ENST00000481048 OVOS2A0A0J9YW53 1432 aa9.14□□□□□ -0.95
LRCH3-216ENST00000481048 OVOS2Q6IE36 1432 aa9.14□□□□□ -0.95
LRCH3-216ENST00000481048 KTN1Q86UP2 1357 aaKnown RBP9.13□□□□□ -0.95
LRCH3-216ENST00000481048 WNK3Q9BYP7 1800 aa9.13□□□□□ -0.95
LRCH3-216ENST00000481048 WASHC4Q2M389 1173 aa9.13□□□□□ -0.95
LRCH3-216ENST00000481048 NUP188Q5SRE5 1749 aa9.13□□□□□ -0.95
LRCH3-216ENST00000481048 PEAK1Q9H792 1746 aa9.13□□□□□ -0.95
LRCH3-216ENST00000481048 MON2Q7Z3U7 1717 aa9.12□□□□□ -0.95
LRCH3-216ENST00000481048 A0A1W2PNR3 127 aa9.12□□□□□ -0.95
LRCH3-216ENST00000481048 DCDC2BA2VCK2 349 aa9.12□□□□□ -0.95
LRCH3-216ENST00000481048 K7ELQ4 463 aaPredicted RBP9.12□□□□□ -0.95
LRCH3-216ENST00000481048 PIK3R2O00459 728 aa9.12□□□□□ -0.95
LRCH3-216ENST00000481048 EXOC5O00471 708 aa9.12□□□□□ -0.95
LRCH3-216ENST00000481048 GNB5O14775 395 aa9.12□□□□□ -0.95
LRCH3-216ENST00000481048 TPRNQ4KMQ1 711 aa9.12□□□□□ -0.95
LRCH3-216ENST00000481048 CARD11Q9BXL7 1154 aa9.12□□□□□ -0.95
LRCH3-216ENST00000481048 USP54Q70EL1 1684 aa9.12□□□□□ -0.95
LRCH3-216ENST00000481048 USP31Q70CQ4 1352 aa9.12□□□□□ -0.95
LRCH3-216ENST00000481048 CCDC7Q96M83 1385 aa9.12□□□□□ -0.95
LRCH3-216ENST00000481048 ZBTB7CA1YPR0 619 aa9.11□□□□□ -0.95
LRCH3-216ENST00000481048 TMEM229AB2RXF0 380 aa9.11□□□□□ -0.95
LRCH3-216ENST00000481048 HDGFL2Q7Z4V5 671 aaPredicted RBP9.11□□□□□ -0.95
LRCH3-216ENST00000481048 LRRC37A3O60309 1634 aa9.11□□□□□ -0.95
LRCH3-216ENST00000481048 CDK2AP1O14519 115 aa9.1□□□□□ -0.95
LRCH3-216ENST00000481048 KHNYNO15037 678 aaKnown RBP9.1□□□□□ -0.95
LRCH3-216ENST00000481048 MAPTP10636 758 aaKnown RBP9.1□□□□□ -0.95
LRCH3-216ENST00000481048 TATP17735 454 aaPredicted RBP9.1□□□□□ -0.95
LRCH3-216ENST00000481048 CD33P20138 364 aa9.1□□□□□ -0.95
LRCH3-216ENST00000481048 TNP2Q05952 138 aa9.1□□□□□ -0.95
LRCH3-216ENST00000481048 SLC4A9Q96Q91 983 aa9.1□□□□□ -0.95
LRCH3-216ENST00000481048 SPON1Q9HCB6 807 aa9.1□□□□□ -0.95
LRCH3-216ENST00000481048 HCN2Q9UL51 889 aa9.1□□□□□ -0.95
LRCH3-216ENST00000481048 NFAT5O94916 1531 aa9.1□□□□□ -0.95
LRCH3-216ENST00000481048 A6NJY4 79 aa9.09□□□□□ -0.95
LRCH3-216ENST00000481048 KCNQ2O43526 872 aa9.09□□□□□ -0.95
LRCH3-216ENST00000481048 ADH6P28332 368 aa9.09□□□□□ -0.95
LRCH3-216ENST00000481048 DGKGP49619 791 aa9.09□□□□□ -0.95
LRCH3-216ENST00000481048 ZNF295-AS1Q8N0V1 137 aa9.09□□□□□ -0.95
LRCH3-216ENST00000481048 MARCH10Q8NA82 808 aaPredicted RBP9.09□□□□□ -0.95
LRCH3-216ENST00000481048 TERF2IPQ9NYB0 399 aa9.09□□□□□ -0.95
LRCH3-216ENST00000481048 IQSEC3Q9UPP2 1182 aaPredicted RBP9.09□□□□□ -0.95
LRCH3-216ENST00000481048 USP3Q9Y6I4 520 aa9.09□□□□□ -0.95
LRCH3-216ENST00000481048 LTN1O94822 1766 aa9.09□□□□□ -0.95
LRCH3-216ENST00000481048 FURINP09958 794 aa9.08□□□□□ -0.96
LRCH3-216ENST00000481048 SOX11P35716 441 aa9.08□□□□□ -0.96
LRCH3-216ENST00000481048 MTFR1Q15390 333 aa9.08□□□□□ -0.96
LRCH3-216ENST00000481048 XP32Q5T750 250 aa9.08□□□□□ -0.96
LRCH3-216ENST00000481048 CHSY3Q70JA7 882 aa9.08□□□□□ -0.96
LRCH3-216ENST00000481048 ZDHHC3Q9NYG2 299 aa9.08□□□□□ -0.96
LRCH3-216ENST00000481048 KLF15Q9UIH9 416 aa9.08□□□□□ -0.96
LRCH3-216ENST00000481048 GJA3Q9Y6H8 435 aa9.08□□□□□ -0.96
LRCH3-216ENST00000481048 TONSLQ96HA7 1378 aa9.08□□□□□ -0.96
LRCH3-216ENST00000481048 NINLQ9Y2I6 1382 aa9.08□□□□□ -0.96
LRCH3-216ENST00000481048 EDC4Q6P2E9 1401 aaKnown RBP9.07□□□□□ -0.96
LRCH3-216ENST00000481048 C1QTNF9BB2RNN3 333 aa9.07□□□□□ -0.96
LRCH3-216ENST00000481048 PIK3CDO00329 1044 aa9.07□□□□□ -0.96
LRCH3-216ENST00000481048 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.07□□□□□ -0.96
LRCH3-216ENST00000481048 TMC1Q8TDI8 760 aa9.07□□□□□ -0.96
LRCH3-216ENST00000481048 ZIC5Q96T25 663 aa9.07□□□□□ -0.96
LRCH3-216ENST00000481048 SLC12A5Q9H2X9 1139 aa9.07□□□□□ -0.96
LRCH3-216ENST00000481048 NOP53Q9NZM5 478 aaKnown RBP9.07□□□□□ -0.96
LRCH3-216ENST00000481048 PCDHGA11Q9Y5H2 935 aa9.07□□□□□ -0.96
LRCH3-216ENST00000481048 PARP3Q9Y6F1 533 aa9.07□□□□□ -0.96
LRCH3-216ENST00000481048 CD163L1Q9NR16 1453 aa9.07□□□□□ -0.96
LRCH3-216ENST00000481048 BICDL1Q6ZP65 573 aa9.06□□□□□ -0.96
LRCH3-216ENST00000481048 FCHSD1Q86WN1 690 aa9.06□□□□□ -0.96
LRCH3-216ENST00000481048 IL2RBP14784 551 aa9.05□□□□□ -0.96
LRCH3-216ENST00000481048 PCBP4P57723 403 aaKnown RBP9.05□□□□□ -0.96
LRCH3-216ENST00000481048 CD163Q86VB7 1156 aa9.05□□□□□ -0.96
LRCH3-216ENST00000481048 NME9Q86XW9 330 aa9.05□□□□□ -0.96
LRCH3-216ENST00000481048 AVENQ9NQS1 362 aaPredicted RBP9.05□□□□□ -0.96
LRCH3-216ENST00000481048 NLRP2Q9NX02 1062 aa9.05□□□□□ -0.96
LRCH3-216ENST00000481048 PPP1R1BQ9UD71 204 aaPredicted RBP9.05□□□□□ -0.96
LRCH3-216ENST00000481048 PRR12Q9ULL5 1215 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms