RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 PIP4K2BP78356 416 aa9.24□□□□□ -0.93
CALD1-219ENST00000480638 PLA2G4EQ3MJ16 856 aa9.24□□□□□ -0.93
CALD1-219ENST00000480638 SHISA2Q6UWI4 295 aa9.24□□□□□ -0.93
CALD1-219ENST00000480638 GALNT11Q8NCW6 608 aa9.24□□□□□ -0.93
CALD1-219ENST00000480638 NACC1Q96RE7 527 aa9.24□□□□□ -0.93
CALD1-219ENST00000480638 BCO2Q9BYV7 579 aa9.24□□□□□ -0.93
CALD1-219ENST00000480638 PRPF40AO75400 957 aaKnown RBP9.23□□□□□ -0.93
CALD1-219ENST00000480638 ITPKAP23677 461 aa9.23□□□□□ -0.93
CALD1-219ENST00000480638 CD163Q86VB7 1156 aa9.23□□□□□ -0.93
CALD1-219ENST00000480638 DCAF11Q8TEB1 546 aa9.23□□□□□ -0.93
CALD1-219ENST00000480638 WNT8BQ93098 351 aa9.23□□□□□ -0.93
CALD1-219ENST00000480638 SEC31BQ9NQW1 1179 aa9.23□□□□□ -0.93
CALD1-219ENST00000480638 TMEM238LA0A1B0GVL6 79 aa9.22□□□□□ -0.93
CALD1-219ENST00000480638 C1QTNF9BB2RNN3 333 aa9.22□□□□□ -0.93
CALD1-219ENST00000480638 ESRRAP11474 423 aaPredicted RBP9.22□□□□□ -0.93
CALD1-219ENST00000480638 MFAP1P55081 439 aaKnown RBP9.22□□□□□ -0.93
CALD1-219ENST00000480638 IKBKEQ14164 716 aa9.22□□□□□ -0.93
CALD1-219ENST00000480638 FOXD4L6Q3SYB3 417 aaPredicted RBP9.22□□□□□ -0.93
CALD1-219ENST00000480638 FOXD4L3Q6VB84 417 aaPredicted RBP9.22□□□□□ -0.93
CALD1-219ENST00000480638 FBXO33Q7Z6M2 555 aa9.22□□□□□ -0.93
CALD1-219ENST00000480638 KLHL23Q8NBE8 558 aa9.22□□□□□ -0.93
CALD1-219ENST00000480638 SLC7A3Q8WY07 619 aa9.22□□□□□ -0.93
CALD1-219ENST00000480638 ZNF576Q9H609 170 aa9.22□□□□□ -0.93
CALD1-219ENST00000480638 SOX1O00570 391 aaPredicted RBP9.21□□□□□ -0.94
CALD1-219ENST00000480638 PTPN12Q05209 780 aaKnown RBP9.21□□□□□ -0.94
CALD1-219ENST00000480638 HGSNATQ68CP4 663 aa9.21□□□□□ -0.94
CALD1-219ENST00000480638 IGF2-ASQ6U949 168 aa9.21□□□□□ -0.94
CALD1-219ENST00000480638 NXPE4Q6UWF7 544 aa9.21□□□□□ -0.94
CALD1-219ENST00000480638 LENG1Q96BZ8 264 aaPredicted RBP9.21□□□□□ -0.94
CALD1-219ENST00000480638 CLEC4MQ9H2X3 399 aaPredicted RBP9.21□□□□□ -0.94
CALD1-219ENST00000480638 OSGEPQ9NPF4 335 aa9.21□□□□□ -0.94
CALD1-219ENST00000480638 C9orf172C9J069 976 aa9.2□□□□□ -0.94
CALD1-219ENST00000480638 CD68P34810 354 aaPredicted RBP9.2□□□□□ -0.94
CALD1-219ENST00000480638 FCGRTP55899 365 aa9.2□□□□□ -0.94
CALD1-219ENST00000480638 FGD1P98174 961 aa9.2□□□□□ -0.94
CALD1-219ENST00000480638 PCDH1Q08174 1060 aa9.2□□□□□ -0.94
CALD1-219ENST00000480638 KLHDC7BQ96G42 594 aa9.2□□□□□ -0.94
CALD1-219ENST00000480638 OSBPL7Q9BZF2 842 aa9.2□□□□□ -0.94
CALD1-219ENST00000480638 SPG7Q9UQ90 795 aa9.2□□□□□ -0.94
CALD1-219ENST00000480638 ADAM11O75078 769 aa9.19□□□□□ -0.94
CALD1-219ENST00000480638 ARL4DP49703 201 aa9.19□□□□□ -0.94
CALD1-219ENST00000480638 C19orf57Q0VDD7 668 aa9.19□□□□□ -0.94
CALD1-219ENST00000480638 DUSP9Q99956 384 aaKnown RBP9.19□□□□□ -0.94
CALD1-219ENST00000480638 SRCIN1Q9C0H9 1055 aa9.19□□□□□ -0.94
CALD1-219ENST00000480638 SOX17Q9H6I2 414 aaPredicted RBP9.19□□□□□ -0.94
CALD1-219ENST00000480638 KCNK4Q9NYG8 393 aa9.19□□□□□ -0.94
CALD1-219ENST00000480638 USP21Q9UK80 565 aa9.19□□□□□ -0.94
CALD1-219ENST00000480638 GNA15P30679 374 aa9.18□□□□□ -0.94
CALD1-219ENST00000480638 NRG1Q02297 640 aaPredicted RBP9.18□□□□□ -0.94
CALD1-219ENST00000480638 ADGRE1Q14246 886 aa9.18□□□□□ -0.94
CALD1-219ENST00000480638 MBTPS1Q14703 1052 aa9.18□□□□□ -0.94
CALD1-219ENST00000480638 SUZ12Q15022 739 aaKnown RBP9.18□□□□□ -0.94
CALD1-219ENST00000480638 ZNF423Q2M1K9 1284 aa9.18□□□□□ -0.94
CALD1-219ENST00000480638 DTHD1Q6ZMT9 781 aa9.18□□□□□ -0.94
CALD1-219ENST00000480638 FOXD4L4Q8WXT5 416 aaPredicted RBP9.18□□□□□ -0.94
CALD1-219ENST00000480638 MRPL18Q9H0U6 180 aaKnown RBP9.18□□□□□ -0.94
CALD1-219ENST00000480638 C12orf49Q9H741 205 aa9.18□□□□□ -0.94
CALD1-219ENST00000480638 RNF19AQ9NV58 838 aa9.18□□□□□ -0.94
CALD1-219ENST00000480638 PPP4R2Q9NY27 417 aa9.18□□□□□ -0.94
CALD1-219ENST00000480638 GIPC1O14908 333 aa9.17□□□□□ -0.94
CALD1-219ENST00000480638 DDX3YO15523 660 aaKnown RBP9.17□□□□□ -0.94
CALD1-219ENST00000480638 WISP1O95388 367 aa9.17□□□□□ -0.94
CALD1-219ENST00000480638 B3GALT4O96024 378 aa9.17□□□□□ -0.94
CALD1-219ENST00000480638 FRMD6Q96NE9 622 aa9.17□□□□□ -0.94
CALD1-219ENST00000480638 XRCC5P13010 732 aaKnown RBP9.16□□□□□ -0.94
CALD1-219ENST00000480638 NLRP12P59046 1061 aa9.16□□□□□ -0.94
CALD1-219ENST00000480638 TAGLNQ01995 201 aaKnown RBP9.16□□□□□ -0.94
CALD1-219ENST00000480638 RPS26P11Q5JNZ5 115 aaPredicted RBP9.16□□□□□ -0.94
CALD1-219ENST00000480638 GPAT2Q6NUI2 795 aa9.16□□□□□ -0.94
CALD1-219ENST00000480638 C3orf58Q8NDZ4 430 aa9.16□□□□□ -0.94
CALD1-219ENST00000480638 PROCP04070 461 aa9.15□□□□□ -0.94
CALD1-219ENST00000480638 GSTT1P30711 240 aa9.15□□□□□ -0.94
CALD1-219ENST00000480638 FAAP100Q0VG06 881 aa9.15□□□□□ -0.94
CALD1-219ENST00000480638 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.15□□□□□ -0.94
CALD1-219ENST00000480638 UBASH3BQ8TF42 649 aa9.15□□□□□ -0.94
CALD1-219ENST00000480638 ZFYVE1Q9HBF4 777 aa9.15□□□□□ -0.94
CALD1-219ENST00000480638 PARP2Q9UGN5 583 aa9.15□□□□□ -0.94
CALD1-219ENST00000480638 F8W735 103 aaPredicted RBP9.14□□□□□ -0.95
CALD1-219ENST00000480638 GSTM4Q03013 218 aa9.14□□□□□ -0.95
CALD1-219ENST00000480638 ACAD11Q709F0 780 aa9.14□□□□□ -0.95
CALD1-219ENST00000480638 TXNRD3Q86VQ6 643 aa9.14□□□□□ -0.95
CALD1-219ENST00000480638 SPOCK3Q9BQ16 436 aa9.14□□□□□ -0.95
CALD1-219ENST00000480638 BCL2L13Q9BXK5 485 aa9.14□□□□□ -0.95
CALD1-219ENST00000480638 FAM8A1Q9UBU6 413 aa9.14□□□□□ -0.95
CALD1-219ENST00000480638 MSTNO14793 375 aa9.13□□□□□ -0.95
CALD1-219ENST00000480638 USP17L7P0C7H9 530 aa9.13□□□□□ -0.95
CALD1-219ENST00000480638 EIF4BP23588 611 aaKnown RBP9.13□□□□□ -0.95
CALD1-219ENST00000480638 DUOXA2Q1HG44 320 aa9.13□□□□□ -0.95
CALD1-219ENST00000480638 TMEM130Q8N3G9 435 aa9.13□□□□□ -0.95
CALD1-219ENST00000480638 NRSN2Q9GZP1 204 aa9.13□□□□□ -0.95
CALD1-219ENST00000480638 AKAP2Q9Y2D5 859 aa9.13□□□□□ -0.95
CALD1-219ENST00000480638 IGHA1P01876 353 aa9.12□□□□□ -0.95
CALD1-219ENST00000480638 NOS3P29474 1203 aa9.12□□□□□ -0.95
CALD1-219ENST00000480638 GATA4P43694 442 aa9.12□□□□□ -0.95
CALD1-219ENST00000480638 DAB2P98082 770 aa9.12□□□□□ -0.95
CALD1-219ENST00000480638 AGGF1Q8N302 714 aaeCLIP9.12□□□□□ -0.95
CALD1-219ENST00000480638 WFDC12Q8WWY7 111 aa9.12□□□□□ -0.95
CALD1-219ENST00000480638 TRIM56Q9BRZ2 755 aaKnown RBP9.12□□□□□ -0.95
CALD1-219ENST00000480638 AKTIPQ9H8T0 292 aa9.12□□□□□ -0.95
CALD1-219ENST00000480638 GPN3Q9UHW5 284 aaPredicted RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms