RNA–Protein interactions for RNA: ENST00000480393.5

TNFRSF25-213, Transcript of TNF receptor superfamily member 25, human

TSL 1 (best)

Gene TNFRSF25, Length 1,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TNFRSF25-213	ENST00000480393	GBP4	Q96PP9	640 aa		33.16	■■■□□ 2.9
TNFRSF25-213	ENST00000480393	DOCK2	Q92608	1830 aa		33.16	■■■□□ 2.9
TNFRSF25-213	ENST00000480393	AKT1S1	Q96B36	256 aa		33.15	■■■□□ 2.9
TNFRSF25-213	ENST00000480393	LARP6	Q9BRS8	491 aa	Known RBP	33.15	■■■□□ 2.9
TNFRSF25-213	ENST00000480393	MCM4	P33991	863 aa		33.14	■■■□□ 2.9
TNFRSF25-213	ENST00000480393	SH2B1	Q9NRF2	756 aa	Predicted RBP	33.14	■■■□□ 2.9
TNFRSF25-213	ENST00000480393	TNS1	Q9HBL0	1735 aa	Known RBP	33.13	■■■□□ 2.89
TNFRSF25-213	ENST00000480393	DDR1	Q08345	913 aa		33.13	■■■□□ 2.89
TNFRSF25-213	ENST00000480393	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	33.13	■■■□□ 2.89
TNFRSF25-213	ENST00000480393	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	33.13	■■■□□ 2.89
TNFRSF25-213	ENST00000480393	MYO5A	Q9Y4I1	1855 aa	Known RBP	33.12	■■■□□ 2.89
TNFRSF25-213	ENST00000480393	POLRMT	O00411	1230 aa	Known RBP	33.12	■■■□□ 2.89
TNFRSF25-213	ENST00000480393	MAGEB6	Q8N7X4	407 aa		33.12	■■■□□ 2.89
TNFRSF25-213	ENST00000480393	TCRBV5S4A2T	A0A5A2	114 aa		33.11	■■■□□ 2.89
TNFRSF25-213	ENST00000480393	HMGB1	P09429	215 aa	Known RBP	33.11	■■■□□ 2.89
TNFRSF25-213	ENST00000480393	FLAD1	Q8NFF5	587 aa		33.11	■■■□□ 2.89
TNFRSF25-213	ENST00000480393	RGS17	Q9UGC6	210 aa	Predicted RBP	33.11	■■■□□ 2.89
TNFRSF25-213	ENST00000480393	WTIP	A6NIX2	430 aa	Predicted RBP	33.11	■■■□□ 2.89
TNFRSF25-213	ENST00000480393	LRP2BP	Q9P2M1	347 aa		33.11	■■■□□ 2.89
TNFRSF25-213	ENST00000480393	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	33.11	■■■□□ 2.89
TNFRSF25-213	ENST00000480393	IMMT	Q16891	758 aa	Known RBP	33.1	■■■□□ 2.89
TNFRSF25-213	ENST00000480393	POTEA	Q6S8J7	498 aa		33.1	■■■□□ 2.89
TNFRSF25-213	ENST00000480393	AIDA	Q96BJ3	306 aa		33.1	■■■□□ 2.89
TNFRSF25-213	ENST00000480393	FAM84B	Q96KN1	310 aa	Predicted RBP	33.1	■■■□□ 2.89
TNFRSF25-213	ENST00000480393	TCEANC2	Q96MN5	208 aa		33.1	■■■□□ 2.89
TNFRSF25-213	ENST00000480393	DENND2A	Q9ULE3	1009 aa		33.1	■■■□□ 2.89
TNFRSF25-213	ENST00000480393	RBM17	Q96I25	401 aa	Known RBP	33.09	■■■□□ 2.89
TNFRSF25-213	ENST00000480393	DDX11L8	A8MPP1	907 aa		33.08	■■■□□ 2.89
TNFRSF25-213	ENST00000480393	FOXP2	O15409	715 aa		33.08	■■■□□ 2.89
TNFRSF25-213	ENST00000480393	LARGE1	O95461	756 aa		33.08	■■■□□ 2.89
TNFRSF25-213	ENST00000480393	CRY2	Q49AN0	593 aa		33.08	■■■□□ 2.89
TNFRSF25-213	ENST00000480393	STOX1	Q6ZVD7	989 aa		33.08	■■■□□ 2.89
TNFRSF25-213	ENST00000480393	COL23A1	Q86Y22	540 aa	Predicted RBP	33.08	■■■□□ 2.89
TNFRSF25-213	ENST00000480393	RGPD3	A6NKT7	1758 aa	Predicted RBP	33.08	■■■□□ 2.89
TNFRSF25-213	ENST00000480393	RGPD4	Q7Z3J3	1758 aa		33.08	■■■□□ 2.89
TNFRSF25-213	ENST00000480393	SEMA3E	O15041	775 aa		33.08	■■■□□ 2.89
TNFRSF25-213	ENST00000480393	COL9A3	Q14050	684 aa	Predicted RBP	33.08	■■■□□ 2.89
TNFRSF25-213	ENST00000480393	TTLL5	Q6EMB2	1281 aa		33.08	■■■□□ 2.89
TNFRSF25-213	ENST00000480393	FBXO33	Q7Z6M2	555 aa		33.08	■■■□□ 2.89
TNFRSF25-213	ENST00000480393	NLGN1	Q8N2Q7	840 aa		33.08	■■■□□ 2.89
TNFRSF25-213	ENST00000480393	ANKIB1	Q9P2G1	1089 aa		33.08	■■■□□ 2.89
TNFRSF25-213	ENST00000480393		E7EWF7	191 aa		33.07	■■■□□ 2.88
TNFRSF25-213	ENST00000480393	PKP1	Q13835	747 aa		33.06	■■■□□ 2.88
TNFRSF25-213	ENST00000480393	TPCN1	Q9ULQ1	816 aa		33.06	■■■□□ 2.88
TNFRSF25-213	ENST00000480393	COL1A1	P02452	1464 aa	Predicted RBP	33.06	■■■□□ 2.88
TNFRSF25-213	ENST00000480393	FGA	P02671	866 aa		33.05	■■■□□ 2.88
TNFRSF25-213	ENST00000480393	KLRK1	P26718	216 aa		33.05	■■■□□ 2.88
TNFRSF25-213	ENST00000480393	HIBADH	P31937	336 aa	Known RBP	33.05	■■■□□ 2.88
TNFRSF25-213	ENST00000480393	CCDC83	Q8IWF9	413 aa		33.05	■■■□□ 2.88
TNFRSF25-213	ENST00000480393		A0A0G2JLW4	131 aa		33.05	■■■□□ 2.88
TNFRSF25-213	ENST00000480393	TOB2	Q14106	344 aa	Predicted RBP	33.05	■■■□□ 2.88
TNFRSF25-213	ENST00000480393	ABCF2	Q9UG63	623 aa		33.05	■■■□□ 2.88
TNFRSF25-213	ENST00000480393	APP	P05067	770 aa		33.04	■■■□□ 2.88
TNFRSF25-213	ENST00000480393	FGD1	P98174	961 aa		33.04	■■■□□ 2.88
TNFRSF25-213	ENST00000480393	ME3	Q16798	604 aa		33.04	■■■□□ 2.88
TNFRSF25-213	ENST00000480393	SMC3	Q9UQE7	1217 aa		33.04	■■■□□ 2.88
TNFRSF25-213	ENST00000480393	XDH	P47989	1333 aa		33.04	■■■□□ 2.88
TNFRSF25-213	ENST00000480393	MBD4	O95243	580 aa		33.03	■■■□□ 2.88
TNFRSF25-213	ENST00000480393		Q6ZUG5	572 aa		33.03	■■■□□ 2.88
TNFRSF25-213	ENST00000480393	DHX32	Q7L7V1	743 aa	Known RBP	33.03	■■■□□ 2.88
TNFRSF25-213	ENST00000480393	RAI14	Q9P0K7	980 aa		33.03	■■■□□ 2.88
TNFRSF25-213	ENST00000480393	LEMD3	Q9Y2U8	911 aa		33.03	■■■□□ 2.88
TNFRSF25-213	ENST00000480393	HAND2	P61296	217 aa		33.02	■■■□□ 2.88
TNFRSF25-213	ENST00000480393	STRBP	Q96SI9	672 aa	Known RBP	33.02	■■■□□ 2.88
TNFRSF25-213	ENST00000480393	ZNF213	O14771	459 aa		33.02	■■■□□ 2.88
TNFRSF25-213	ENST00000480393	PDS5A	Q29RF7	1337 aa	Known RBP	33.02	■■■□□ 2.88
TNFRSF25-213	ENST00000480393	CLEC17A	Q6ZS10	378 aa		33	■■■□□ 2.87
TNFRSF25-213	ENST00000480393	LAMA4	Q16363	1823 aa		33	■■■□□ 2.87
TNFRSF25-213	ENST00000480393	GOLGA6L22	H0YM25	854 aa		32.99	■■■□□ 2.87
TNFRSF25-213	ENST00000480393	ARMT1	Q9H993	441 aa		32.99	■■■□□ 2.87
TNFRSF25-213	ENST00000480393	PTMS	P20962	102 aa		32.99	■■■□□ 2.87
TNFRSF25-213	ENST00000480393	CYP7A1	P22680	504 aa		32.99	■■■□□ 2.87
TNFRSF25-213	ENST00000480393	NECAB1	Q8N987	351 aa		32.99	■■■□□ 2.87
TNFRSF25-213	ENST00000480393	ZDHHC9	Q9Y397	364 aa		32.99	■■■□□ 2.87
TNFRSF25-213	ENST00000480393	PNPLA7	Q6ZV29	1317 aa		32.99	■■■□□ 2.87
TNFRSF25-213	ENST00000480393	GNAT2	P19087	354 aa		32.98	■■■□□ 2.87
TNFRSF25-213	ENST00000480393	HOXA10	P31260	410 aa	Predicted RBP	32.98	■■■□□ 2.87
TNFRSF25-213	ENST00000480393	MYH13	Q9UKX3	1938 aa		32.98	■■■□□ 2.87
TNFRSF25-213	ENST00000480393	BBOX1	O75936	387 aa		32.97	■■■□□ 2.87
TNFRSF25-213	ENST00000480393	BAG4	O95429	457 aa	Known RBP	32.97	■■■□□ 2.87
TNFRSF25-213	ENST00000480393	CRAMP1	Q96RY5	1269 aa		32.97	■■■□□ 2.87
TNFRSF25-213	ENST00000480393	BRD1	O95696	1058 aa		32.97	■■■□□ 2.87
TNFRSF25-213	ENST00000480393	LRRC2	Q9BYS8	371 aa		32.97	■■■□□ 2.87
TNFRSF25-213	ENST00000480393	PARP3	Q9Y6F1	533 aa		32.97	■■■□□ 2.87
TNFRSF25-213	ENST00000480393	ZMYM6	O95789	1325 aa		32.96	■■■□□ 2.87
TNFRSF25-213	ENST00000480393	IRS2	Q9Y4H2	1338 aa		32.96	■■■□□ 2.87
TNFRSF25-213	ENST00000480393	KLRG2	A4D1S0	409 aa	Predicted RBP	32.96	■■■□□ 2.87
TNFRSF25-213	ENST00000480393	PATL2	C9JE40	543 aa	Known RBP	32.96	■■■□□ 2.87
TNFRSF25-213	ENST00000480393	EXOSC10	Q01780	885 aa	Known RBP	32.96	■■■□□ 2.87
TNFRSF25-213	ENST00000480393	BRF1	Q92994	677 aa		32.96	■■■□□ 2.87
TNFRSF25-213	ENST00000480393	GPSM2	P81274	684 aa		32.95	■■■□□ 2.87
TNFRSF25-213	ENST00000480393	ST3GAL1	Q11201	340 aa		32.95	■■■□□ 2.87
TNFRSF25-213	ENST00000480393	CHAF1A	Q13111	956 aa	Predicted RBP	32.95	■■■□□ 2.87
TNFRSF25-213	ENST00000480393	ALX1	Q15699	326 aa		32.95	■■■□□ 2.87
TNFRSF25-213	ENST00000480393	RALYL	Q86SE5	291 aa	Known RBP	32.95	■■■□□ 2.87
TNFRSF25-213	ENST00000480393	LCORL	Q8N3X6	602 aa		32.95	■■■□□ 2.87
TNFRSF25-213	ENST00000480393	BRIP1	Q9BX63	1249 aa		32.95	■■■□□ 2.87
TNFRSF25-213	ENST00000480393	NRXN2	Q9P2S2	1712 aa		32.95	■■■□□ 2.87
TNFRSF25-213	ENST00000480393	WDR33	Q9C0J8	1336 aa	Known RBP	32.94	■■■□□ 2.86
TNFRSF25-213	ENST00000480393	FOXD4L5	Q5VV16	416 aa	Predicted RBP	32.94	■■■□□ 2.86

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms