RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 USP26Q9BXU7 913 aa6.98□□□□□ -1.29
CPS1-207ENST00000479988 ARHGEF10LQ9HCE6 1279 aa6.98□□□□□ -1.29
CPS1-207ENST00000479988 MCM9Q9NXL9 1143 aa6.98□□□□□ -1.29
CPS1-207ENST00000479988 UBR1Q8IWV7 1749 aa6.98□□□□□ -1.29
CPS1-207ENST00000479988 USP17L3A6NCW0 530 aa6.98□□□□□ -1.29
CPS1-207ENST00000479988 USP17L4A6NCW7 530 aa6.98□□□□□ -1.29
CPS1-207ENST00000479988 TAF5LO75529 589 aa6.98□□□□□ -1.29
CPS1-207ENST00000479988 PDCP20941 246 aa6.98□□□□□ -1.29
CPS1-207ENST00000479988 KRT32Q14532 448 aa6.98□□□□□ -1.29
CPS1-207ENST00000479988 USP17L1Q7RTZ2 530 aa6.98□□□□□ -1.29
CPS1-207ENST00000479988 SSH3Q8TE77 659 aa6.98□□□□□ -1.29
CPS1-207ENST00000479988 ZNF277Q9NRM2 450 aaPredicted RBP6.98□□□□□ -1.29
CPS1-207ENST00000479988 MAP4K4O95819 1239 aaPredicted RBP6.98□□□□□ -1.29
CPS1-207ENST00000479988 TSPY3P0CV98 308 aa6.98□□□□□ -1.29
CPS1-207ENST00000479988 TSPY8P0CW00 308 aa6.98□□□□□ -1.29
CPS1-207ENST00000479988 ESYT1Q9BSJ8 1104 aa6.98□□□□□ -1.29
CPS1-207ENST00000479988 SMC3Q9UQE7 1217 aa6.98□□□□□ -1.29
CPS1-207ENST00000479988 ZNF213O14771 459 aa6.97□□□□□ -1.29
CPS1-207ENST00000479988 SLC4A8Q2Y0W8 1093 aa6.97□□□□□ -1.29
CPS1-207ENST00000479988 SLC9C2Q5TAH2 1124 aa6.97□□□□□ -1.29
CPS1-207ENST00000479988 TBC1D9BQ66K14 1250 aa6.97□□□□□ -1.29
CPS1-207ENST00000479988 NLRP10Q86W26 655 aa6.97□□□□□ -1.29
CPS1-207ENST00000479988 EVI5LQ96CN4 794 aa6.97□□□□□ -1.29
CPS1-207ENST00000479988 BICC1Q9H694 974 aaKnown RBP6.97□□□□□ -1.29
CPS1-207ENST00000479988 WDR33Q9C0J8 1336 aaKnown RBP6.97□□□□□ -1.29
CPS1-207ENST00000479988 IBSPP21815 317 aaPredicted RBP6.97□□□□□ -1.29
CPS1-207ENST00000479988 SPC25Q9HBM1 224 aa6.97□□□□□ -1.29
CPS1-207ENST00000479988 NEURL1BA8MQ27 555 aa6.97□□□□□ -1.29
CPS1-207ENST00000479988 GNAT2P19087 354 aa6.97□□□□□ -1.29
CPS1-207ENST00000479988 IARSP41252 1262 aaKnown RBP6.97□□□□□ -1.29
CPS1-207ENST00000479988 UBE4AQ14139 1066 aa6.97□□□□□ -1.29
CPS1-207ENST00000479988 KRT26Q7Z3Y9 468 aa6.97□□□□□ -1.29
CPS1-207ENST00000479988 SIRT2Q8IXJ6 389 aa6.97□□□□□ -1.29
CPS1-207ENST00000479988 LINC00116Q8NCU8 138 aa6.97□□□□□ -1.29
CPS1-207ENST00000479988 COA1Q9GZY4 146 aa6.97□□□□□ -1.29
CPS1-207ENST00000479988 STAP2Q9UGK3 403 aa6.97□□□□□ -1.29
CPS1-207ENST00000479988 CCDC196A0A1B0GTZ2 297 aa6.97□□□□□ -1.29
CPS1-207ENST00000479988 SPDYE4A6NLX3 237 aa6.97□□□□□ -1.29
CPS1-207ENST00000479988 KAT14Q9H8E8 782 aa6.97□□□□□ -1.29
CPS1-207ENST00000479988 CYP46A1Q9Y6A2 500 aa6.97□□□□□ -1.29
CPS1-207ENST00000479988 SLC4A4Q9Y6R1 1079 aa6.97□□□□□ -1.29
CPS1-207ENST00000479988 TCP10Q12799 353 aa6.96□□□□□ -1.29
CPS1-207ENST00000479988 RAB3GAP1Q15042 981 aa6.96□□□□□ -1.29
CPS1-207ENST00000479988 USP44Q9H0E7 712 aa6.96□□□□□ -1.29
CPS1-207ENST00000479988 TNS2Q63HR2 1409 aa6.96□□□□□ -1.3
CPS1-207ENST00000479988 CDKL5O76039 1030 aa6.96□□□□□ -1.3
CPS1-207ENST00000479988 KIF5BP33176 963 aa6.96□□□□□ -1.3
CPS1-207ENST00000479988 STYK1Q6J9G0 422 aa6.96□□□□□ -1.3
CPS1-207ENST00000479988 PODNQ7Z5L7 613 aa6.96□□□□□ -1.3
CPS1-207ENST00000479988 USP40Q9NVE5 1235 aa6.96□□□□□ -1.3
CPS1-207ENST00000479988 NOD1Q9Y239 953 aa6.96□□□□□ -1.3
CPS1-207ENST00000479988 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.96□□□□□ -1.3
CPS1-207ENST00000479988 TCP10L2B9ZVM9 353 aa6.96□□□□□ -1.3
CPS1-207ENST00000479988 CWC27Q6UX04 472 aaKnown RBP6.96□□□□□ -1.3
CPS1-207ENST00000479988 APOBEC3FQ8IUX4 373 aaKnown RBP6.96□□□□□ -1.3
CPS1-207ENST00000479988 INTS4Q96HW7 963 aaKnown RBP6.96□□□□□ -1.3
CPS1-207ENST00000479988 CDK5RAP3Q96JB5 506 aa6.96□□□□□ -1.3
CPS1-207ENST00000479988 SH2B1Q9NRF2 756 aaPredicted RBP6.96□□□□□ -1.3
CPS1-207ENST00000479988 ZNRF3Q9ULT6 936 aa6.96□□□□□ -1.3
CPS1-207ENST00000479988 KIF1AQ12756 1690 aa6.96□□□□□ -1.3
CPS1-207ENST00000479988 PHLPP1O60346 1717 aa6.96□□□□□ -1.3
CPS1-207ENST00000479988 USP42Q9H9J4 1324 aaKnown RBP6.96□□□□□ -1.3
CPS1-207ENST00000479988 LETM1O95202 739 aaPredicted RBP6.96□□□□□ -1.3
CPS1-207ENST00000479988 PTMAP06454 111 aaKnown RBP6.96□□□□□ -1.3
CPS1-207ENST00000479988 CCNA1P78396 465 aa6.96□□□□□ -1.3
CPS1-207ENST00000479988 SUSD4Q5VX71 490 aa6.96□□□□□ -1.3
CPS1-207ENST00000479988 TNPO1Q92973 898 aaKnown RBP6.96□□□□□ -1.3
CPS1-207ENST00000479988 DDX11Q96FC9 970 aa6.96□□□□□ -1.3
CPS1-207ENST00000479988 GPHNQ9NQX3 736 aaPredicted RBP6.96□□□□□ -1.3
CPS1-207ENST00000479988 A0A1B0GUL7 405 aa6.95□□□□□ -1.3
CPS1-207ENST00000479988 SCNN1DP51172 638 aa6.95□□□□□ -1.3
CPS1-207ENST00000479988 CHRNDQ07001 517 aa6.95□□□□□ -1.3
CPS1-207ENST00000479988 TBC1D10BQ4KMP7 808 aaPredicted RBP6.95□□□□□ -1.3
CPS1-207ENST00000479988 PPP4R3AQ6IN85 833 aa6.95□□□□□ -1.3
CPS1-207ENST00000479988 MFSD6Q6ZSS7 791 aa6.95□□□□□ -1.3
CPS1-207ENST00000479988 CATIPQ7Z7H3 387 aa6.95□□□□□ -1.3
CPS1-207ENST00000479988 TANGO6Q9C0B7 1094 aa6.95□□□□□ -1.3
CPS1-207ENST00000479988 IBTKQ9P2D0 1353 aaPredicted RBP6.95□□□□□ -1.3
CPS1-207ENST00000479988 MON2Q7Z3U7 1717 aa6.95□□□□□ -1.3
CPS1-207ENST00000479988 CHMLP26374 656 aa6.95□□□□□ -1.3
CPS1-207ENST00000479988 GADL1Q6ZQY3 521 aa6.95□□□□□ -1.3
CPS1-207ENST00000479988 CRAMP1Q96RY5 1269 aa6.95□□□□□ -1.3
CPS1-207ENST00000479988 PRKAG2Q9UGJ0 569 aa6.95□□□□□ -1.3
CPS1-207ENST00000479988 PLEKHG2Q9H7P9 1386 aa6.95□□□□□ -1.3
CPS1-207ENST00000479988 MSNP26038 577 aaKnown RBP6.95□□□□□ -1.3
CPS1-207ENST00000479988 PRR5LQ6MZQ0 368 aa6.95□□□□□ -1.3
CPS1-207ENST00000479988 MAGEB6Q8N7X4 407 aa6.95□□□□□ -1.3
CPS1-207ENST00000479988 ZNF594Q96JF6 807 aaPredicted RBP6.95□□□□□ -1.3
CPS1-207ENST00000479988 RBM27Q9P2N5 1060 aaKnown RBP6.95□□□□□ -1.3
CPS1-207ENST00000479988 PA2G4Q9UQ80 394 aaKnown RBP6.95□□□□□ -1.3
CPS1-207ENST00000479988 CLRN2A0PK11 232 aa6.94□□□□□ -1.3
CPS1-207ENST00000479988 NRDCO43847 1150 aa6.94□□□□□ -1.3
CPS1-207ENST00000479988 HOXD10P28358 340 aa6.94□□□□□ -1.3
CPS1-207ENST00000479988 NKX1-1Q15270 411 aaPredicted RBP6.94□□□□□ -1.3
CPS1-207ENST00000479988 ESR2Q92731 530 aa6.94□□□□□ -1.3
CPS1-207ENST00000479988 ZMYND15Q9H091 742 aa6.94□□□□□ -1.3
CPS1-207ENST00000479988 COL5A2P05997 1499 aaPredicted RBP6.94□□□□□ -1.3
CPS1-207ENST00000479988 EIF5P55010 431 aaKnown RBP6.94□□□□□ -1.3
CPS1-207ENST00000479988 AOC3Q16853 763 aa6.94□□□□□ -1.3
CPS1-207ENST00000479988 BLOC1S2Q6QNY1 142 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms