RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 ME1P48163 572 aa28.76■■■□□ 2.19
SYNGAP1-206ENST00000479510 KIF6Q6ZMV9 814 aa28.76■■■□□ 2.19
SYNGAP1-206ENST00000479510 BRAPQ7Z569 592 aa28.76■■■□□ 2.19
SYNGAP1-206ENST00000479510 FSIP1Q8NA03 581 aa28.76■■■□□ 2.19
SYNGAP1-206ENST00000479510 MRPS27Q92552 414 aaKnown RBP28.76■■■□□ 2.19
SYNGAP1-206ENST00000479510 ZNF512BQ96KM6 892 aaPredicted RBP28.76■■■□□ 2.19
SYNGAP1-206ENST00000479510 NAP1L2Q9ULW6 460 aaPredicted RBP28.76■■■□□ 2.19
SYNGAP1-206ENST00000479510 YEATS4O95619 227 aa28.76■■■□□ 2.19
SYNGAP1-206ENST00000479510 IFIT5Q13325 482 aaKnown RBP28.76■■■□□ 2.19
SYNGAP1-206ENST00000479510 WASHC4Q2M389 1173 aa28.76■■■□□ 2.19
SYNGAP1-206ENST00000479510 NCOA7Q8NI08 942 aa28.76■■■□□ 2.19
SYNGAP1-206ENST00000479510 KCNG4Q8TDN1 519 aa28.76■■■□□ 2.19
SYNGAP1-206ENST00000479510 NAT10Q9H0A0 1025 aaKnown RBP28.76■■■□□ 2.19
SYNGAP1-206ENST00000479510 NWD2Q9ULI1 1742 aa28.75■■■□□ 2.19
SYNGAP1-206ENST00000479510 FGAP02671 866 aa28.75■■■□□ 2.19
SYNGAP1-206ENST00000479510 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.75■■■□□ 2.191e-6■■■■□ 25.6
SYNGAP1-206ENST00000479510 SOS2Q07890 1332 aaPredicted RBP28.75■■■□□ 2.19
SYNGAP1-206ENST00000479510 PRC1O43663 620 aa28.74■■■□□ 2.19
SYNGAP1-206ENST00000479510 ADORA1P30542 326 aa28.74■■■□□ 2.19
SYNGAP1-206ENST00000479510 FTOQ9C0B1 505 aaKnown RBP eCLIP28.74■■■□□ 2.19
SYNGAP1-206ENST00000479510 POLR3EQ9NVU0 708 aa28.74■■■□□ 2.19
SYNGAP1-206ENST00000479510 DDX60Q8IY21 1712 aaKnown RBP28.74■■■□□ 2.19
SYNGAP1-206ENST00000479510 TAF7LQ5H9L4 462 aa28.74■■■□□ 2.19
SYNGAP1-206ENST00000479510 C11orf57Q6ZUT1 292 aaPredicted RBP28.74■■■□□ 2.19
SYNGAP1-206ENST00000479510 CEP57L1Q8IYX8 460 aa28.74■■■□□ 2.19
SYNGAP1-206ENST00000479510 FMR1NBQ8N0W7 255 aaPredicted RBP28.74■■■□□ 2.19
SYNGAP1-206ENST00000479510 FBXO18Q8NFZ0 1043 aa28.73■■■□□ 2.19
SYNGAP1-206ENST00000479510 C8orf76Q96K31 380 aa28.73■■■□□ 2.19
SYNGAP1-206ENST00000479510 CHST3Q7LGC8 479 aa28.73■■■□□ 2.19
SYNGAP1-206ENST00000479510 TMOD3Q9NYL9 352 aa28.73■■■□□ 2.19
SYNGAP1-206ENST00000479510 PCDHA7Q9UN72 937 aa28.73■■■□□ 2.19
SYNGAP1-206ENST00000479510 BECN2A8MW95 431 aa28.72■■■□□ 2.19
SYNGAP1-206ENST00000479510 FOSBP53539 338 aa28.72■■■□□ 2.19
SYNGAP1-206ENST00000479510 RALYLQ86SE5 291 aaKnown RBP28.72■■■□□ 2.19
SYNGAP1-206ENST00000479510 LINC00301Q8NCQ3 95 aa28.72■■■□□ 2.19
SYNGAP1-206ENST00000479510 NRBP1Q9UHY1 535 aa28.72■■■□□ 2.19
SYNGAP1-206ENST00000479510 ATRNO75882 1429 aa28.71■■■□□ 2.19
SYNGAP1-206ENST00000479510 HPS5Q9UPZ3 1129 aa28.71■■■□□ 2.19
SYNGAP1-206ENST00000479510 CTIFO43310 598 aaKnown RBP28.71■■■□□ 2.19
SYNGAP1-206ENST00000479510 ZAP70P43403 619 aa28.71■■■□□ 2.19
SYNGAP1-206ENST00000479510 RIC1Q4ADV7 1423 aa28.7■■■□□ 2.19
SYNGAP1-206ENST00000479510 KLF18A0A0U1RQI7 1052 aa28.7■■■□□ 2.19
SYNGAP1-206ENST00000479510 ZNF213O14771 459 aa28.7■■■□□ 2.19
SYNGAP1-206ENST00000479510 TTF1Q15361 905 aaPredicted RBP28.7■■■□□ 2.19
SYNGAP1-206ENST00000479510 ATP2B3Q16720 1220 aa28.7■■■□□ 2.19
SYNGAP1-206ENST00000479510 HSP90AB3PQ58FF7 597 aa28.7■■■□□ 2.19
SYNGAP1-206ENST00000479510 ZNF710Q8N1W2 664 aa28.7■■■□□ 2.19
SYNGAP1-206ENST00000479510 RIPOR2Q9Y4F9 1068 aa28.7■■■□□ 2.19
SYNGAP1-206ENST00000479510 GOLGA8BA8MQT2 603 aa28.7■■■□□ 2.18
SYNGAP1-206ENST00000479510 STARD3NLO95772 234 aa28.7■■■□□ 2.18
SYNGAP1-206ENST00000479510 GUCY1B3Q02153 619 aa28.7■■■□□ 2.18
SYNGAP1-206ENST00000479510 LRMPQ12912 555 aa28.7■■■□□ 2.18
SYNGAP1-206ENST00000479510 DHX40Q8IX18 779 aaKnown RBP28.7■■■□□ 2.18
SYNGAP1-206ENST00000479510 BPIFA3Q9BQP9 254 aa28.7■■■□□ 2.18
SYNGAP1-206ENST00000479510 CCDC94Q9BW85 323 aaPredicted RBP28.7■■■□□ 2.18
SYNGAP1-206ENST00000479510 ORC3Q9UBD5 711 aaPredicted RBP28.7■■■□□ 2.18
SYNGAP1-206ENST00000479510 MYH7P12883 1935 aa28.69■■■□□ 2.18
SYNGAP1-206ENST00000479510 RIOK3O14730 519 aaKnown RBP28.69■■■□□ 2.18
SYNGAP1-206ENST00000479510 GPAA1O43292 621 aa28.69■■■□□ 2.18
SYNGAP1-206ENST00000479510 SCARF1Q14162 830 aa28.69■■■□□ 2.18
SYNGAP1-206ENST00000479510 STK38Q15208 465 aa28.69■■■□□ 2.18
SYNGAP1-206ENST00000479510 CACTINQ8WUQ7 758 aaKnown RBP28.69■■■□□ 2.18
SYNGAP1-206ENST00000479510 MAP3K15Q6ZN16 1313 aa28.69■■■□□ 2.18
SYNGAP1-206ENST00000479510 TOGARAM1Q9Y4F4 1720 aa28.69■■■□□ 2.18
SYNGAP1-206ENST00000479510 RBM6P78332 1123 aaKnown RBP28.68■■■□□ 2.18
SYNGAP1-206ENST00000479510 GIGYF2Q6Y7W6 1299 aaKnown RBP28.68■■■□□ 2.18
SYNGAP1-206ENST00000479510 PUS7LQ9H0K6 701 aaKnown RBP28.68■■■□□ 2.18
SYNGAP1-206ENST00000479510 CPLX1O14810 134 aa28.68■■■□□ 2.18
SYNGAP1-206ENST00000479510 ANTXR2P58335 489 aa28.68■■■□□ 2.18
SYNGAP1-206ENST00000479510 SYCP1Q15431 976 aa28.68■■■□□ 2.18
SYNGAP1-206ENST00000479510 PAXBP1Q9Y5B6 917 aa28.68■■■□□ 2.18
SYNGAP1-206ENST00000479510 SMTNL1A8MU46 457 aa28.67■■■□□ 2.18
SYNGAP1-206ENST00000479510 HAND2P61296 217 aa28.67■■■□□ 2.18
SYNGAP1-206ENST00000479510 SF3A1Q15459 793 aaKnown RBP28.67■■■□□ 2.18
SYNGAP1-206ENST00000479510 LRRC8AQ8IWT6 810 aa28.67■■■□□ 2.18
SYNGAP1-206ENST00000479510 FAM89AQ96GI7 184 aa28.67■■■□□ 2.18
SYNGAP1-206ENST00000479510 XIRP1Q702N8 1843 aaKnown RBP28.67■■■□□ 2.18
SYNGAP1-206ENST00000479510 MYSM1Q5VVJ2 828 aa28.66■■■□□ 2.18
SYNGAP1-206ENST00000479510 SDF4Q9BRK5 362 aa28.66■■■□□ 2.18
SYNGAP1-206ENST00000479510 BCL2L12Q9HB09 334 aa28.66■■■□□ 2.18
SYNGAP1-206ENST00000479510 GPHNQ9NQX3 736 aaPredicted RBP28.66■■■□□ 2.18
SYNGAP1-206ENST00000479510 ABCA3Q99758 1704 aa28.66■■■□□ 2.18
SYNGAP1-206ENST00000479510 SPTLC2O15270 562 aa28.66■■■□□ 2.18
SYNGAP1-206ENST00000479510 ADD2P35612 726 aa28.66■■■□□ 2.18
SYNGAP1-206ENST00000479510 TRDNQ13061 729 aa28.66■■■□□ 2.18
SYNGAP1-206ENST00000479510 CCDC144BQ3MJ40 725 aa28.66■■■□□ 2.18
SYNGAP1-206ENST00000479510 METTL24Q5JXM2 366 aa28.66■■■□□ 2.18
SYNGAP1-206ENST00000479510 CCDC144CPQ8IYA2 1237 aa28.66■■■□□ 2.18
SYNGAP1-206ENST00000479510 DHX8Q14562 1220 aaKnown RBP28.65■■■□□ 2.18
SYNGAP1-206ENST00000479510 UBE3CQ15386 1083 aa28.65■■■□□ 2.18
SYNGAP1-206ENST00000479510 CDKL5O76039 1030 aa28.65■■■□□ 2.18
SYNGAP1-206ENST00000479510 SYNE3Q6ZMZ3 975 aa28.65■■■□□ 2.18
SYNGAP1-206ENST00000479510 ZMYM6O95789 1325 aa28.64■■■□□ 2.18
SYNGAP1-206ENST00000479510 DNAJC10Q8IXB1 793 aa28.64■■■□□ 2.18
SYNGAP1-206ENST00000479510 TTLL11Q8NHH1 800 aa28.64■■■□□ 2.18
SYNGAP1-206ENST00000479510 KCND1Q9NSA2 647 aa28.64■■■□□ 2.18
SYNGAP1-206ENST00000479510 KIAA1468Q9P260 1216 aa28.64■■■□□ 2.18
SYNGAP1-206ENST00000479510 ANKRD18BA2A2Z9 1011 aa28.63■■■□□ 2.17
SYNGAP1-206ENST00000479510 LDHAL6AQ6ZMR3 332 aa28.63■■■□□ 2.17
SYNGAP1-206ENST00000479510 CLIC4Q9Y696 253 aa28.63■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms