RNA–Protein interactions for RNA: ENST00000477949.1

USP33-208, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 2

Gene USP33, Length 663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-208ENST00000477949 DCAF11Q8TEB1 546 aa9.45□□□□□ -0.9
USP33-208ENST00000477949 CNKSR1Q969H4 720 aa9.45□□□□□ -0.9
USP33-208ENST00000477949 NLRP2Q9NX02 1062 aa9.45□□□□□ -0.9
USP33-208ENST00000477949 CEP126Q9P2H0 1117 aa9.45□□□□□ -0.9
USP33-208ENST00000477949 TNRC6CQ9HCJ0 1690 aaKnown RBP9.45□□□□□ -0.9
USP33-208ENST00000477949 N4BP2Q86UW6 1770 aaPredicted RBP9.45□□□□□ -0.9
USP33-208ENST00000477949 GPR37L1O60883 481 aa9.44□□□□□ -0.9
USP33-208ENST00000477949 SRPK2P78362 688 aaKnown RBP9.44□□□□□ -0.9
USP33-208ENST00000477949 CFHR5Q9BXR6 569 aa9.44□□□□□ -0.9
USP33-208ENST00000477949 KCPQ6ZWJ8 1503 aa9.44□□□□□ -0.9
USP33-208ENST00000477949 MON2Q7Z3U7 1717 aa9.44□□□□□ -0.9
USP33-208ENST00000477949 USP31Q70CQ4 1352 aa9.43□□□□□ -0.9
USP33-208ENST00000477949 TTC21AQ8NDW8 1320 aa9.43□□□□□ -0.9
USP33-208ENST00000477949 MYCP01106 439 aaPredicted RBP9.43□□□□□ -0.9
USP33-208ENST00000477949 XAGE2Q96GT9 111 aa9.43□□□□□ -0.9
USP33-208ENST00000477949 DCAF5Q96JK2 942 aa9.43□□□□□ -0.9
USP33-208ENST00000477949 SNRKQ9NRH2 765 aa9.43□□□□□ -0.9
USP33-208ENST00000477949 RAB6BQ9NRW1 208 aa9.43□□□□□ -0.9
USP33-208ENST00000477949 A0A0C4DFX4 3053 aa9.42□□□□□ -0.9
USP33-208ENST00000477949 ARFGEF1Q9Y6D6 1849 aa9.42□□□□□ -0.9
USP33-208ENST00000477949 MEGF6O75095 1541 aa9.42□□□□□ -0.9
USP33-208ENST00000477949 PLEKHG2Q9H7P9 1386 aa9.42□□□□□ -0.9
USP33-208ENST00000477949 IL2RAP01589 272 aa9.42□□□□□ -0.9
USP33-208ENST00000477949 MAP2K3P46734 347 aa9.42□□□□□ -0.9
USP33-208ENST00000477949 SMIM5Q71RC9 77 aa9.42□□□□□ -0.9
USP33-208ENST00000477949 ANKRD24Q8TF21 1146 aa9.42□□□□□ -0.9
USP33-208ENST00000477949 ZSCAN10Q96SZ4 725 aaPredicted RBP9.42□□□□□ -0.9
USP33-208ENST00000477949 MAP2P11137 1827 aaKnown RBP9.42□□□□□ -0.9
USP33-208ENST00000477949 CENPJQ9HC77 1338 aaPredicted RBP9.41□□□□□ -0.9
USP33-208ENST00000477949 OIP5O43482 229 aa9.41□□□□□ -0.9
USP33-208ENST00000477949 NBPF1Q3BBV0 1214 aa9.41□□□□□ -0.9
USP33-208ENST00000477949 FLAD1Q8NFF5 587 aa9.41□□□□□ -0.9
USP33-208ENST00000477949 DDX54Q8TDD1 881 aaKnown RBP9.41□□□□□ -0.9
USP33-208ENST00000477949 SYTL4Q96C24 671 aaPredicted RBP9.41□□□□□ -0.9
USP33-208ENST00000477949 PHF24Q9UPV7 400 aa9.41□□□□□ -0.9
USP33-208ENST00000477949 HRH3Q9Y5N1 445 aa9.41□□□□□ -0.9
USP33-208ENST00000477949 USP47Q96K76 1375 aa9.4□□□□□ -0.9
USP33-208ENST00000477949 MSTNO14793 375 aa9.4□□□□□ -0.9
USP33-208ENST00000477949 GTF2E1P29083 439 aaPredicted RBP9.4□□□□□ -0.9
USP33-208ENST00000477949 PHKA2P46019 1235 aa9.4□□□□□ -0.9
USP33-208ENST00000477949 BRPF1P55201 1214 aaPredicted RBP9.4□□□□□ -0.9
USP33-208ENST00000477949 CCDC85AQ96PX6 553 aaPredicted RBP9.4□□□□□ -0.9
USP33-208ENST00000477949 OXCT2Q9BYC2 517 aaPredicted RBP9.4□□□□□ -0.9
USP33-208ENST00000477949 RGPD2P0DJD1 1756 aa9.4□□□□□ -0.91
USP33-208ENST00000477949 SBF1O95248 1867 aa9.39□□□□□ -0.91
USP33-208ENST00000477949 A0A1B0GTH6 734 aa9.39□□□□□ -0.91
USP33-208ENST00000477949 PLA2G4EQ3MJ16 856 aa9.39□□□□□ -0.91
USP33-208ENST00000477949 GNASQ5JWF2 1037 aa9.39□□□□□ -0.91
USP33-208ENST00000477949 C9orf131Q5VYM1 1079 aa9.39□□□□□ -0.91
USP33-208ENST00000477949 GPAMQ9HCL2 828 aa9.39□□□□□ -0.91
USP33-208ENST00000477949 CD163L1Q9NR16 1453 aa9.39□□□□□ -0.91
USP33-208ENST00000477949 PALLDQ8WX93 1383 aa9.38□□□□□ -0.91
USP33-208ENST00000477949 LBRQ14739 615 aaKnown RBP9.38□□□□□ -0.91
USP33-208ENST00000477949 TMEM214Q6NUQ4 689 aaKnown RBP9.38□□□□□ -0.91
USP33-208ENST00000477949 C16orf71Q8IYS4 520 aaPredicted RBP9.38□□□□□ -0.91
USP33-208ENST00000477949 SMC1BQ8NDV3 1235 aa9.38□□□□□ -0.91
USP33-208ENST00000477949 NSD3Q9BZ95 1437 aa9.38□□□□□ -0.91
USP33-208ENST00000477949 SBNO2Q9Y2G9 1366 aa9.37□□□□□ -0.91
USP33-208ENST00000477949 FOXN1O15353 648 aa9.37□□□□□ -0.91
USP33-208ENST00000477949 THBS1P07996 1170 aa9.37□□□□□ -0.91
USP33-208ENST00000477949 USP4Q13107 963 aa9.37□□□□□ -0.91
USP33-208ENST00000477949 RRAGCQ9HB90 399 aa9.37□□□□□ -0.91
USP33-208ENST00000477949 BCS1LQ9Y276 419 aa9.37□□□□□ -0.91
USP33-208ENST00000477949 ITGB4P16144 1822 aa9.36□□□□□ -0.91
USP33-208ENST00000477949 A0A0G2JLW4 131 aa9.36□□□□□ -0.91
USP33-208ENST00000477949 KCNA3P22001 575 aa9.36□□□□□ -0.91
USP33-208ENST00000477949 TGFB2P61812 414 aa9.36□□□□□ -0.91
USP33-208ENST00000477949 ARHGAP27Q6ZUM4 889 aa9.36□□□□□ -0.91
USP33-208ENST00000477949 PGBD3Q8N328 593 aa9.36□□□□□ -0.91
USP33-208ENST00000477949 PRM3Q9NNZ6 103 aa9.36□□□□□ -0.91
USP33-208ENST00000477949 PRDM10Q9NQV6 1147 aa9.36□□□□□ -0.91
USP33-208ENST00000477949 KDM6AO15550 1401 aaPredicted RBP9.36□□□□□ -0.91
USP33-208ENST00000477949 KTN1Q86UP2 1357 aaKnown RBP9.36□□□□□ -0.91
USP33-208ENST00000477949 KDM2BQ8NHM5 1336 aa9.35□□□□□ -0.91
USP33-208ENST00000477949 MMP10P09238 476 aa9.35□□□□□ -0.91
USP33-208ENST00000477949 C4AP0C0L4 1744 aa9.35□□□□□ -0.91
USP33-208ENST00000477949 SSFA2P28290 1259 aa9.35□□□□□ -0.91
USP33-208ENST00000477949 EIF4G2P78344 907 aaKnown RBP eCLIP9.35□□□□□ -0.91
USP33-208ENST00000477949 MLLT1Q03111 559 aaPredicted RBP9.35□□□□□ -0.91
USP33-208ENST00000477949 TSGA10IPQ3SY00 556 aa9.35□□□□□ -0.91
USP33-208ENST00000477949 C4orf17Q53FE4 359 aa9.35□□□□□ -0.91
USP33-208ENST00000477949 NME9Q86XW9 330 aa9.35□□□□□ -0.91
USP33-208ENST00000477949 PHTF2Q8N3S3 785 aa9.35□□□□□ -0.91
USP33-208ENST00000477949 GALNT6Q8NCL4 622 aa9.35□□□□□ -0.91
USP33-208ENST00000477949 SPOCK3Q9BQ16 436 aa9.35□□□□□ -0.91
USP33-208ENST00000477949 GDF2Q9UK05 429 aaPredicted RBP9.35□□□□□ -0.91
USP33-208ENST00000477949 ITGB2P05107 769 aa9.34□□□□□ -0.91
USP33-208ENST00000477949 DPEP1P16444 411 aa9.34□□□□□ -0.91
USP33-208ENST00000477949 MSX1P28360 303 aa9.34□□□□□ -0.91
USP33-208ENST00000477949 UBAP2LQ14157 1087 aaKnown RBP9.34□□□□□ -0.91
USP33-208ENST00000477949 EFHC2Q5JST6 749 aa9.34□□□□□ -0.91
USP33-208ENST00000477949 ZCRB1Q8TBF4 217 aaKnown RBP9.34□□□□□ -0.91
USP33-208ENST00000477949 IP6K1Q92551 441 aa9.34□□□□□ -0.91
USP33-208ENST00000477949 RGS19P49795 217 aa9.33□□□□□ -0.92
USP33-208ENST00000477949 LINC00116Q8NCU8 138 aa9.33□□□□□ -0.92
USP33-208ENST00000477949 RUBCNLQ9H714 662 aa9.33□□□□□ -0.92
USP33-208ENST00000477949 RNF181Q9P0P0 153 aa9.33□□□□□ -0.92
USP33-208ENST00000477949 EVC2Q86UK5 1308 aa9.32□□□□□ -0.92
USP33-208ENST00000477949 SNRPNP63162 240 aaKnown RBP9.32□□□□□ -0.92
USP33-208ENST00000477949 SLFNL1Q499Z3 407 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms