RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 TPM4P67936 248 aa11.34□□□□□ -0.59
CMC1-209ENST00000477739 SNW1Q13573 536 aaKnown RBP11.34□□□□□ -0.59
CMC1-209ENST00000477739 KRT32Q14532 448 aa11.34□□□□□ -0.59
CMC1-209ENST00000477739 STX1AQ16623 288 aa11.34□□□□□ -0.59
CMC1-209ENST00000477739 METTL24Q5JXM2 366 aa11.34□□□□□ -0.59
CMC1-209ENST00000477739 MTERF4Q7Z6M4 381 aaKnown RBP11.34□□□□□ -0.59
CMC1-209ENST00000477739 ZNF396Q96N95 335 aaPredicted RBP11.34□□□□□ -0.59
CMC1-209ENST00000477739 XPO4Q9C0E2 1151 aaKnown RBP11.34□□□□□ -0.59
CMC1-209ENST00000477739 COPRSQ9NQ92 184 aa11.34□□□□□ -0.59
CMC1-209ENST00000477739 USP42Q9H9J4 1324 aaKnown RBP11.34□□□□□ -0.59
CMC1-209ENST00000477739 ERCC3P19447 782 aa11.34□□□□□ -0.59
CMC1-209ENST00000477739 FKBP15Q5T1M5 1219 aa11.34□□□□□ -0.59
CMC1-209ENST00000477739 UTP14AQ9BVJ6 771 aaKnown RBP11.34□□□□□ -0.59
CMC1-209ENST00000477739 TM6SF1Q9BZW5 370 aa11.34□□□□□ -0.59
CMC1-209ENST00000477739 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.34□□□□□ -0.59
CMC1-209ENST00000477739 PRC1O43663 620 aa11.34□□□□□ -0.59
CMC1-209ENST00000477739 TRIM29Q14134 588 aa11.34□□□□□ -0.59
CMC1-209ENST00000477739 PODXL2Q9NZ53 605 aa11.34□□□□□ -0.59
CMC1-209ENST00000477739 AFMP43652 599 aa11.33□□□□□ -0.6
CMC1-209ENST00000477739 PDE4CQ08493 712 aa11.33□□□□□ -0.6
CMC1-209ENST00000477739 NCBP1Q09161 790 aaKnown RBP11.33□□□□□ -0.6
CMC1-209ENST00000477739 DHX37Q8IY37 1157 aaKnown RBP11.33□□□□□ -0.6
CMC1-209ENST00000477739 GRAMD1CQ8IYS0 662 aa11.33□□□□□ -0.6
CMC1-209ENST00000477739 MIGA1Q8NAN2 632 aa11.33□□□□□ -0.6
CMC1-209ENST00000477739 DESI2Q9BSY9 194 aa11.33□□□□□ -0.6
CMC1-209ENST00000477739 ATP5JP18859 108 aa11.33□□□□□ -0.6
CMC1-209ENST00000477739 CCDC158Q5M9N0 1113 aa11.33□□□□□ -0.6
CMC1-209ENST00000477739 KIF18AQ8NI77 898 aa11.33□□□□□ -0.6
CMC1-209ENST00000477739 SLC26A6Q9BXS9 759 aa11.33□□□□□ -0.6
CMC1-209ENST00000477739 ANO10Q9NW15 660 aa11.33□□□□□ -0.6
CMC1-209ENST00000477739 TMOD3Q9NYL9 352 aa11.33□□□□□ -0.6
CMC1-209ENST00000477739 HMG20BQ9P0W2 317 aa11.33□□□□□ -0.6
CMC1-209ENST00000477739 U3KPZ7 1027 aaPredicted RBP11.33□□□□□ -0.6
CMC1-209ENST00000477739 LTN1O94822 1766 aa11.33□□□□□ -0.6
CMC1-209ENST00000477739 B4E1Z4 1266 aa11.33□□□□□ -0.6
CMC1-209ENST00000477739 E7EWF7 191 aa11.33□□□□□ -0.6
CMC1-209ENST00000477739 PNOCQ13519 176 aa11.32□□□□□ -0.6
CMC1-209ENST00000477739 DHX32Q7L7V1 743 aaKnown RBP11.32□□□□□ -0.6
CMC1-209ENST00000477739 CCDC24Q8N4L8 307 aa11.32□□□□□ -0.6
CMC1-209ENST00000477739 NAT10Q9H0A0 1025 aaKnown RBP11.32□□□□□ -0.6
CMC1-209ENST00000477739 PCDHA7Q9UN72 937 aa11.32□□□□□ -0.6
CMC1-209ENST00000477739 MAPK8IP1Q9UQF2 711 aa11.32□□□□□ -0.6
CMC1-209ENST00000477739 FAM208AQ9UK61 1670 aaKnown RBP11.32□□□□□ -0.6
CMC1-209ENST00000477739 PHACTR2O75167 634 aa11.32□□□□□ -0.6
CMC1-209ENST00000477739 ZAP70P43403 619 aa11.32□□□□□ -0.6
CMC1-209ENST00000477739 GYS2P54840 703 aa11.32□□□□□ -0.6
CMC1-209ENST00000477739 KIF6Q6ZMV9 814 aa11.32□□□□□ -0.6
CMC1-209ENST00000477739 BICDL1Q6ZP65 573 aa11.32□□□□□ -0.6
CMC1-209ENST00000477739 LRRN4CLQ8ND94 238 aa11.32□□□□□ -0.6
CMC1-209ENST00000477739 KCNJ14Q9UNX9 436 aa11.32□□□□□ -0.6
CMC1-209ENST00000477739 TBC1D2BQ9UPU7 963 aa11.32□□□□□ -0.6
CMC1-209ENST00000477739 ZNF213O14771 459 aa11.32□□□□□ -0.6
CMC1-209ENST00000477739 IL2RBP14784 551 aa11.32□□□□□ -0.6
CMC1-209ENST00000477739 CASP1P29466 404 aa11.32□□□□□ -0.6
CMC1-209ENST00000477739 DHX8Q14562 1220 aaKnown RBP11.32□□□□□ -0.6
CMC1-209ENST00000477739 IMMTQ16891 758 aaKnown RBP11.32□□□□□ -0.6
CMC1-209ENST00000477739 ARHGAP29Q52LW3 1261 aa11.32□□□□□ -0.6
CMC1-209ENST00000477739 MRPS27Q92552 414 aaKnown RBP11.32□□□□□ -0.6
CMC1-209ENST00000477739 LZTFL1Q9NQ48 299 aa11.32□□□□□ -0.6
CMC1-209ENST00000477739 SEC31AO94979 1220 aaKnown RBP11.31□□□□□ -0.6
CMC1-209ENST00000477739 SLC9C2Q5TAH2 1124 aa11.31□□□□□ -0.6
CMC1-209ENST00000477739 LDHAL6AQ6ZMR3 332 aa11.31□□□□□ -0.6
CMC1-209ENST00000477739 PCDH11XQ9BZA7 1347 aa11.31□□□□□ -0.6
CMC1-209ENST00000477739 PCDH11YQ9BZA8 1340 aa11.31□□□□□ -0.6
CMC1-209ENST00000477739 KDM6AO15550 1401 aaPredicted RBP11.31□□□□□ -0.6
CMC1-209ENST00000477739 PRDM1O75626 825 aa11.31□□□□□ -0.6
CMC1-209ENST00000477739 LRRC8AQ8IWT6 810 aa11.31□□□□□ -0.6
CMC1-209ENST00000477739 ALG1Q9BT22 464 aa11.31□□□□□ -0.6
CMC1-209ENST00000477739 NBPF26B4DH59 902 aa11.31□□□□□ -0.6
CMC1-209ENST00000477739 M0R2C6 588 aa11.31□□□□□ -0.6
CMC1-209ENST00000477739 SPTLC2O15270 562 aa11.31□□□□□ -0.6
CMC1-209ENST00000477739 HSPD1P10809 573 aaKnown RBP11.31□□□□□ -0.6
CMC1-209ENST00000477739 IL15P40933 162 aaPredicted RBP11.31□□□□□ -0.6
CMC1-209ENST00000477739 ADKP55263 362 aaKnown RBP11.31□□□□□ -0.6
CMC1-209ENST00000477739 NBPF14Q5TI25 921 aa11.31□□□□□ -0.6
CMC1-209ENST00000477739 NBPF10Q6P3W6 841 aaKnown RBP11.31□□□□□ -0.6
CMC1-209ENST00000477739 NBPF15Q8N660 670 aa11.31□□□□□ -0.6
CMC1-209ENST00000477739 NSUN7Q8NE18 718 aaKnown RBP11.31□□□□□ -0.6
CMC1-209ENST00000477739 UBXN4Q92575 508 aa11.31□□□□□ -0.6
CMC1-209ENST00000477739 UIMC1Q96RL1 719 aa11.31□□□□□ -0.6
CMC1-209ENST00000477739 RABEP2Q9H5N1 569 aa11.31□□□□□ -0.6
CMC1-209ENST00000477739 UTYO14607 1347 aa11.3□□□□□ -0.6
CMC1-209ENST00000477739 MEGF6O75095 1541 aa11.3□□□□□ -0.6
CMC1-209ENST00000477739 DNA2P51530 1060 aa11.3□□□□□ -0.6
CMC1-209ENST00000477739 UBASH3AP57075 661 aa11.3□□□□□ -0.6
CMC1-209ENST00000477739 GNG11P61952 73 aa11.3□□□□□ -0.6
CMC1-209ENST00000477739 GDAP1L1Q96MZ0 367 aa11.3□□□□□ -0.6
CMC1-209ENST00000477739 PLIN2Q99541 437 aa11.3□□□□□ -0.6
CMC1-209ENST00000477739 PUF60Q9UHX1 559 aaKnown RBP11.3□□□□□ -0.6
CMC1-209ENST00000477739 SCARF1Q14162 830 aa11.3□□□□□ -0.6
CMC1-209ENST00000477739 KBTBD3Q8NAB2 608 aa11.3□□□□□ -0.6
CMC1-209ENST00000477739 CNNM3Q8NE01 707 aa11.3□□□□□ -0.6
CMC1-209ENST00000477739 OSBP2Q969R2 916 aa11.3□□□□□ -0.6
CMC1-209ENST00000477739 SPATA31A3Q5VYP0 1347 aa11.3□□□□□ -0.6
CMC1-209ENST00000477739 TPM3P06753 285 aa11.3□□□□□ -0.6
CMC1-209ENST00000477739 SYKP43405 635 aa11.3□□□□□ -0.6
CMC1-209ENST00000477739 CTDSPL2Q05D32 466 aa11.3□□□□□ -0.6
CMC1-209ENST00000477739 RESTQ13127 1097 aa11.3□□□□□ -0.6
CMC1-209ENST00000477739 OLFM4Q6UX06 510 aa11.3□□□□□ -0.6
CMC1-209ENST00000477739 HEG1Q9ULI3 1381 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms