RNA–Protein interactions for RNA: ENST00000477605.1

CCM2-209, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 2,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-209ENST00000477605 KCPQ6ZWJ8 1503 aa21.14■□□□□ 0.97
CCM2-209ENST00000477605 CCDC57Q2TAC2 916 aa21.14■□□□□ 0.97
CCM2-209ENST00000477605 ZNF710Q8N1W2 664 aa21.14■□□□□ 0.97
CCM2-209ENST00000477605 PLA2G12BQ9BX93 195 aa21.14■□□□□ 0.97
CCM2-209ENST00000477605 NAT10Q9H0A0 1025 aaKnown RBP21.14■□□□□ 0.97
CCM2-209ENST00000477605 CCDC9Q9Y3X0 531 aaKnown RBP21.14■□□□□ 0.97
CCM2-209ENST00000477605 TJP1Q07157 1748 aa21.14■□□□□ 0.97
CCM2-209ENST00000477605 UBR2Q8IWV8 1755 aa21.13■□□□□ 0.97
CCM2-209ENST00000477605 M0R2C6 588 aa21.13■□□□□ 0.97
CCM2-209ENST00000477605 A1BGP04217 495 aa21.13■□□□□ 0.97
CCM2-209ENST00000477605 SYCP1Q15431 976 aa21.13■□□□□ 0.97
CCM2-209ENST00000477605 ADALQ6DHV7 355 aa21.13■□□□□ 0.97
CCM2-209ENST00000477605 OSBP2Q969R2 916 aa21.13■□□□□ 0.97
CCM2-209ENST00000477605 GOLPH3LQ9H4A5 285 aa21.13■□□□□ 0.97
CCM2-209ENST00000477605 BCL9LQ86UU0 1499 aa21.13■□□□□ 0.97
CCM2-209ENST00000477605 TNS2Q63HR2 1409 aa21.13■□□□□ 0.97
CCM2-209ENST00000477605 RIOK3O14730 519 aaKnown RBP21.13■□□□□ 0.97
CCM2-209ENST00000477605 RBM6P78332 1123 aaKnown RBP21.13■□□□□ 0.97
CCM2-209ENST00000477605 CEBPZQ03701 1054 aaKnown RBP21.13■□□□□ 0.97
CCM2-209ENST00000477605 TTC39AQ5SRH9 613 aa21.13■□□□□ 0.97
CCM2-209ENST00000477605 TCIRG1Q13488 830 aa21.12■□□□□ 0.97
CCM2-209ENST00000477605 MRPS27Q92552 414 aaKnown RBP21.12■□□□□ 0.97
CCM2-209ENST00000477605 ZBTB3Q9H5J0 574 aa21.12■□□□□ 0.97
CCM2-209ENST00000477605 PAXBP1Q9Y5B6 917 aa21.12■□□□□ 0.97
CCM2-209ENST00000477605 BECN2A8MW95 431 aa21.11■□□□□ 0.97
CCM2-209ENST00000477605 YEATS4O95619 227 aa21.11■□□□□ 0.97
CCM2-209ENST00000477605 FDPSP14324 419 aaKnown RBP21.11■□□□□ 0.97
CCM2-209ENST00000477605 ME1P48163 572 aa21.11■□□□□ 0.97
CCM2-209ENST00000477605 GORABQ5T7V8 394 aa21.11■□□□□ 0.97
CCM2-209ENST00000477605 BRAPQ7Z569 592 aa21.11■□□□□ 0.97
CCM2-209ENST00000477605 CEP57L1Q8IYX8 460 aa21.11■□□□□ 0.97
CCM2-209ENST00000477605 FSIP1Q8NA03 581 aa21.11■□□□□ 0.97
CCM2-209ENST00000477605 KCNG4Q8TDN1 519 aa21.11■□□□□ 0.97
CCM2-209ENST00000477605 ZNF594Q96JF6 807 aaPredicted RBP21.11■□□□□ 0.97
CCM2-209ENST00000477605 BCL2L12Q9HB09 334 aa21.11■□□□□ 0.97
CCM2-209ENST00000477605 NCOA5Q9HCD5 579 aaKnown RBP21.11■□□□□ 0.97
CCM2-209ENST00000477605 NRBP1Q9UHY1 535 aa21.11■□□□□ 0.97
CCM2-209ENST00000477605 TRPC5Q9UL62 973 aaPredicted RBP21.11■□□□□ 0.97
CCM2-209ENST00000477605 LAMA4Q16363 1823 aa21.11■□□□□ 0.97
CCM2-209ENST00000477605 SLFNL1Q499Z3 407 aa21.11■□□□□ 0.97
CCM2-209ENST00000477605 C11orf57Q6ZUT1 292 aaPredicted RBP21.11■□□□□ 0.97
CCM2-209ENST00000477605 FMR1NBQ8N0W7 255 aaPredicted RBP21.11■□□□□ 0.97
CCM2-209ENST00000477605 APPBP2Q92624 585 aa21.11■□□□□ 0.97
CCM2-209ENST00000477605 SLIT2O94813 1529 aa21.1■□□□□ 0.97
CCM2-209ENST00000477605 PAPPAQ13219 1627 aa21.1■□□□□ 0.97
CCM2-209ENST00000477605 SMTNL1A8MU46 457 aa21.1■□□□□ 0.97
CCM2-209ENST00000477605 ATRNO75882 1429 aa21.1■□□□□ 0.97
CCM2-209ENST00000477605 PUS3Q9BZE2 481 aaKnown RBP21.1■□□□□ 0.97
CCM2-209ENST00000477605 ZMYND15Q9H091 742 aa21.1■□□□□ 0.97
CCM2-209ENST00000477605 POLR3EQ9NVU0 708 aa21.1■□□□□ 0.97
CCM2-209ENST00000477605 PCCAP05165 728 aaPredicted RBP21.09■□□□□ 0.97
CCM2-209ENST00000477605 FKBP4Q02790 459 aaKnown RBP eCLIP21.09■□□□□ 0.97
CCM2-209ENST00000477605 LRMPQ12912 555 aa21.09■□□□□ 0.97
CCM2-209ENST00000477605 CACTINQ8WUQ7 758 aaKnown RBP21.09■□□□□ 0.97
CCM2-209ENST00000477605 XAGE2Q96GT9 111 aa21.09■□□□□ 0.97
CCM2-209ENST00000477605 TEX13AQ9BXU3 409 aaPredicted RBP21.09■□□□□ 0.97
CCM2-209ENST00000477605 NAP1L2Q9ULW6 460 aaPredicted RBP21.09■□□□□ 0.97
CCM2-209ENST00000477605 PCDHA7Q9UN72 937 aa21.09■□□□□ 0.97
CCM2-209ENST00000477605 CSF1RP07333 972 aa21.09■□□□□ 0.97
CCM2-209ENST00000477605 LRRC8AQ8IWT6 810 aa21.09■□□□□ 0.97
CCM2-209ENST00000477605 MB21D2Q8IYB1 491 aaPredicted RBP21.09■□□□□ 0.97
CCM2-209ENST00000477605 SMAP1Q8IYB5 467 aaPredicted RBP21.09■□□□□ 0.97
CCM2-209ENST00000477605 LINC00301Q8NCQ3 95 aa21.09■□□□□ 0.97
CCM2-209ENST00000477605 NCOA7Q8NI08 942 aa21.09■□□□□ 0.97
CCM2-209ENST00000477605 ANKRD7Q92527 254 aa21.09■□□□□ 0.97
CCM2-209ENST00000477605 BPIFA3Q9BQP9 254 aa21.09■□□□□ 0.97
CCM2-209ENST00000477605 MYH15Q9Y2K3 1946 aa21.09■□□□□ 0.97
CCM2-209ENST00000477605 DHX8Q14562 1220 aaKnown RBP21.08■□□□□ 0.97
CCM2-209ENST00000477605 TTLL5Q6EMB2 1281 aa21.08■□□□□ 0.97
CCM2-209ENST00000477605 DHX40Q8IX18 779 aaKnown RBP21.08■□□□□ 0.97
CCM2-209ENST00000477605 FBXO18Q8NFZ0 1043 aa21.08■□□□□ 0.97
CCM2-209ENST00000477605 C8orf76Q96K31 380 aa21.08■□□□□ 0.97
CCM2-209ENST00000477605 FTOQ9C0B1 505 aaKnown RBP eCLIP21.08■□□□□ 0.97
CCM2-209ENST00000477605 A0A0G2JLW4 131 aa21.08■□□□□ 0.96
CCM2-209ENST00000477605 PRC1O43663 620 aa21.08■□□□□ 0.96
CCM2-209ENST00000477605 WASHC4Q2M389 1173 aa21.08■□□□□ 0.96
CCM2-209ENST00000477605 TOM1L2Q6ZVM7 507 aa21.08■□□□□ 0.96
CCM2-209ENST00000477605 ZNF512BQ96KM6 892 aaPredicted RBP21.08■□□□□ 0.96
CCM2-209ENST00000477605 KCND1Q9NSA2 647 aa21.08■□□□□ 0.96
CCM2-209ENST00000477605 FGAP02671 866 aa21.07■□□□□ 0.96
CCM2-209ENST00000477605 IL2RBP14784 551 aa21.07■□□□□ 0.96
CCM2-209ENST00000477605 CARD10Q9BWT7 1032 aa21.07■□□□□ 0.96
CCM2-209ENST00000477605 FOXP2O15409 715 aa21.06■□□□□ 0.96
CCM2-209ENST00000477605 TNNT1P13805 278 aa21.06■□□□□ 0.96
CCM2-209ENST00000477605 FOSBP53539 338 aa21.06■□□□□ 0.96
CCM2-209ENST00000477605 CCDC144BQ3MJ40 725 aa21.06■□□□□ 0.96
CCM2-209ENST00000477605 CCDC144CPQ8IYA2 1237 aa21.06■□□□□ 0.96
CCM2-209ENST00000477605 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.06■□□□□ 0.96
CCM2-209ENST00000477605 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.06■□□□□ 0.96
CCM2-209ENST00000477605 GSDMDP57764 484 aa21.06■□□□□ 0.96
CCM2-209ENST00000477605 STK38Q15208 465 aa21.06■□□□□ 0.96
CCM2-209ENST00000477605 CHST3Q7LGC8 479 aa21.06■□□□□ 0.96
CCM2-209ENST00000477605 RALYLQ86SE5 291 aaKnown RBP21.06■□□□□ 0.96
CCM2-209ENST00000477605 SDF4Q9BRK5 362 aa21.06■□□□□ 0.96
CCM2-209ENST00000477605 PRDM11Q9NQV5 511 aa21.06■□□□□ 0.96
CCM2-209ENST00000477605 IMPACTQ9P2X3 320 aa21.06■□□□□ 0.96
CCM2-209ENST00000477605 KLF18A0A0U1RQI7 1052 aa21.05■□□□□ 0.96
CCM2-209ENST00000477605 ZNF213O14771 459 aa21.05■□□□□ 0.96
CCM2-209ENST00000477605 GUCY1B3Q02153 619 aa21.05■□□□□ 0.96
CCM2-209ENST00000477605 IFIT5Q13325 482 aaKnown RBP21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms