RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 PAXBP1Q9Y5B6 917 aa21.03■□□□□ 0.96
VARS2-209ENST00000477288 PLCG2P16885 1265 aa21.03■□□□□ 0.96
VARS2-209ENST00000477288 BACH1O14867 736 aa21.03■□□□□ 0.96
VARS2-209ENST00000477288 PRPHP41219 470 aa21.03■□□□□ 0.96
VARS2-209ENST00000477288 GJA3Q9Y6H8 435 aa21.03■□□□□ 0.96
VARS2-209ENST00000477288 LRRC59Q96AG4 307 aaKnown RBP21.02■□□□□ 0.96
VARS2-209ENST00000477288 IRS4O14654 1257 aaPredicted RBP21.02■□□□□ 0.96
VARS2-209ENST00000477288 TACC1O75410 805 aa21.02■□□□□ 0.96
VARS2-209ENST00000477288 AOPEPQ8N6M6 819 aa21.02■□□□□ 0.96
VARS2-209ENST00000477288 MRPS27Q92552 414 aaKnown RBP21.02■□□□□ 0.96
VARS2-209ENST00000477288 CAPZA3Q96KX2 299 aa21.02■□□□□ 0.96
VARS2-209ENST00000477288 SMC6Q96SB8 1091 aa21.02■□□□□ 0.96
VARS2-209ENST00000477288 EYA3Q99504 573 aa21.02■□□□□ 0.96
VARS2-209ENST00000477288 ATP2A1O14983 1001 aa21.02■□□□□ 0.96
VARS2-209ENST00000477288 MCM6Q14566 821 aa21.02■□□□□ 0.96
VARS2-209ENST00000477288 KRT2P35908 639 aa21.01■□□□□ 0.95
VARS2-209ENST00000477288 NMIQ13287 307 aaPredicted RBP21.01■□□□□ 0.95
VARS2-209ENST00000477288 ALDH1L1O75891 902 aa21.01■□□□□ 0.95
VARS2-209ENST00000477288 LDHBP07195 334 aaKnown RBP21.01■□□□□ 0.95
VARS2-209ENST00000477288 CCDC171Q6TFL3 1326 aa21.01■□□□□ 0.95
VARS2-209ENST00000477288 DUOX2Q9NRD8 1548 aa21.01■□□□□ 0.95
VARS2-209ENST00000477288 TPD52P55327 224 aaPredicted RBP21.01■□□□□ 0.95
VARS2-209ENST00000477288 UVSSAQ2YD98 709 aa21.01■□□□□ 0.95
VARS2-209ENST00000477288 CHST3Q7LGC8 479 aa21.01■□□□□ 0.95
VARS2-209ENST00000477288 DAAM2Q86T65 1068 aa21.01■□□□□ 0.95
VARS2-209ENST00000477288 IL16Q14005 1332 aa21.01■□□□□ 0.95
VARS2-209ENST00000477288 MSL1Q68DK7 614 aa21.01■□□□□ 0.95
VARS2-209ENST00000477288 ANAPC4Q9UJX5 808 aa21.01■□□□□ 0.95
VARS2-209ENST00000477288 GNAT2P19087 354 aa21.01■□□□□ 0.95
VARS2-209ENST00000477288 MCM7P33993 719 aa21.01■□□□□ 0.95
VARS2-209ENST00000477288 PKD2L1Q9P0L9 805 aa21.01■□□□□ 0.95
VARS2-209ENST00000477288 RSPH14Q9UHP6 348 aa21.01■□□□□ 0.95
VARS2-209ENST00000477288 ODF2LQ9ULJ1 636 aa21.01■□□□□ 0.95
VARS2-209ENST00000477288 TRIM75PA6NK02 468 aa21■□□□□ 0.95
VARS2-209ENST00000477288 CFAP58Q5T655 872 aa21■□□□□ 0.95
VARS2-209ENST00000477288 IGHDP01880 384 aa21■□□□□ 0.95
VARS2-209ENST00000477288 SKILP12757 684 aa21■□□□□ 0.95
VARS2-209ENST00000477288 SPAG1Q07617 926 aa21■□□□□ 0.95
VARS2-209ENST00000477288 NFATC2IPQ8NCF5 419 aa21■□□□□ 0.95
VARS2-209ENST00000477288 ZHX1Q9UKY1 873 aaPredicted RBP21■□□□□ 0.95
VARS2-209ENST00000477288 CALML3P27482 149 aa20.99■□□□□ 0.95
VARS2-209ENST00000477288 TXNDC16Q9P2K2 825 aa20.99■□□□□ 0.95
VARS2-209ENST00000477288 A2MP01023 1474 aa20.99■□□□□ 0.95
VARS2-209ENST00000477288 CAVIN2O95810 425 aa20.99■□□□□ 0.95
VARS2-209ENST00000477288 NUCB1Q02818 461 aa20.99■□□□□ 0.95
VARS2-209ENST00000477288 PLIN2Q99541 437 aa20.99■□□□□ 0.95
VARS2-209ENST00000477288 PDE1AP54750 535 aa20.99■□□□□ 0.95
VARS2-209ENST00000477288 LMBR1Q8WVP7 490 aa20.99■□□□□ 0.95
VARS2-209ENST00000477288 ANKRD2Q9GZV1 360 aa20.99■□□□□ 0.95
VARS2-209ENST00000477288 PPIP5K1Q6PFW1 1433 aa20.98■□□□□ 0.95
VARS2-209ENST00000477288 RNF113AO15541 343 aaKnown RBP20.98■□□□□ 0.95
VARS2-209ENST00000477288 HS2ST1Q7LGA3 356 aa20.98■□□□□ 0.95
VARS2-209ENST00000477288 RBM17Q96I25 401 aaKnown RBP20.98■□□□□ 0.95
VARS2-209ENST00000477288 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.98■□□□□ 0.95
VARS2-209ENST00000477288 ESYT1Q9BSJ8 1104 aa20.98■□□□□ 0.95
VARS2-209ENST00000477288 STMN4Q9H169 189 aaPredicted RBP20.98■□□□□ 0.95
VARS2-209ENST00000477288 SAP30BPQ9UHR5 308 aaKnown RBP20.98■□□□□ 0.95
VARS2-209ENST00000477288 WDR7Q9Y4E6 1490 aa20.98■□□□□ 0.95
VARS2-209ENST00000477288 FAM169AQ9Y6X4 670 aa20.98■□□□□ 0.95
VARS2-209ENST00000477288 CCDC25Q86WR0 208 aa20.98■□□□□ 0.95
VARS2-209ENST00000477288 SNX16P57768 344 aa20.98■□□□□ 0.95
VARS2-209ENST00000477288 CCDC129Q6ZRS4 1044 aa20.98■□□□□ 0.95
VARS2-209ENST00000477288 CEP83Q9Y592 693 aa20.98■□□□□ 0.95
VARS2-209ENST00000477288 CCDC117Q8IWD4 279 aaPredicted RBP20.97■□□□□ 0.95
VARS2-209ENST00000477288 SYT1P21579 422 aa20.97■□□□□ 0.95
VARS2-209ENST00000477288 RAB3GAP1Q15042 981 aa20.97■□□□□ 0.95
VARS2-209ENST00000477288 DNAJC25Q9H1X3 360 aa20.97■□□□□ 0.95
VARS2-209ENST00000477288 OPA1O60313 960 aa20.97■□□□□ 0.95
VARS2-209ENST00000477288 ATP8B2P98198 1209 aa20.97■□□□□ 0.95
VARS2-209ENST00000477288 MSANTD4Q8NCY6 345 aa20.97■□□□□ 0.95
VARS2-209ENST00000477288 ZNF408Q9H9D4 720 aa20.97■□□□□ 0.95
VARS2-209ENST00000477288 CTAGE9A4FU28 777 aa20.97■□□□□ 0.95
VARS2-209ENST00000477288 ARFGAP3Q9NP61 516 aa20.97■□□□□ 0.95
VARS2-209ENST00000477288 STX17P56962 302 aa20.96■□□□□ 0.95
VARS2-209ENST00000477288 USP48Q86UV5 1035 aa20.96■□□□□ 0.95
VARS2-209ENST00000477288 SMC1BQ8NDV3 1235 aa20.96■□□□□ 0.95
VARS2-209ENST00000477288 SLU7O95391 586 aaKnown RBP20.96■□□□□ 0.95
VARS2-209ENST00000477288 CCDC114Q96M63 670 aa20.96■□□□□ 0.95
VARS2-209ENST00000477288 NAP1L3Q99457 506 aaPredicted RBP20.96■□□□□ 0.95
VARS2-209ENST00000477288 GNPATO15228 680 aa20.96■□□□□ 0.95
VARS2-209ENST00000477288 UBXN1Q04323 297 aa20.96■□□□□ 0.95
VARS2-209ENST00000477288 CCDC186Q7Z3E2 898 aa20.96■□□□□ 0.95
VARS2-209ENST00000477288 NEK11Q8NG66 645 aa20.96■□□□□ 0.95
VARS2-209ENST00000477288 SYCP2Q9BX26 1530 aa20.96■□□□□ 0.95
VARS2-209ENST00000477288 ATP6V0A2Q9Y487 856 aa20.96■□□□□ 0.95
VARS2-209ENST00000477288 HARSP12081 509 aaKnown RBP20.96■□□□□ 0.95
VARS2-209ENST00000477288 RTL1A6NKG5 1358 aa20.96■□□□□ 0.95
VARS2-209ENST00000477288 ANKS4BQ8N8V4 417 aa20.95■□□□□ 0.94
VARS2-209ENST00000477288 KCNK9Q9NPC2 374 aa20.95■□□□□ 0.94
VARS2-209ENST00000477288 RALGAPBQ86X10 1494 aa20.95■□□□□ 0.94
VARS2-209ENST00000477288 RXRAP19793 462 aa20.95■□□□□ 0.94
VARS2-209ENST00000477288 TFCP2Q12800 502 aa20.95■□□□□ 0.94
VARS2-209ENST00000477288 KIF5AQ12840 1032 aa20.95■□□□□ 0.94
VARS2-209ENST00000477288 IFT81Q8WYA0 676 aa20.95■□□□□ 0.94
VARS2-209ENST00000477288 NUP160Q12769 1436 aa20.95■□□□□ 0.94
VARS2-209ENST00000477288 ZNF518AQ6AHZ1 1483 aa20.95■□□□□ 0.94
VARS2-209ENST00000477288 APOBRQ0VD83 1088 aa20.95■□□□□ 0.94
VARS2-209ENST00000477288 PROCA1Q8NCQ7 364 aaPredicted RBP20.95■□□□□ 0.94
VARS2-209ENST00000477288 GNA11P29992 359 aa20.95■□□□□ 0.94
VARS2-209ENST00000477288 PPP1R7Q15435 360 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms