RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 PRKAG2Q9UGJ0 569 aa6.49□□□□□ -1.37
XRN1-211ENST00000477237 ZC3H7BQ9UGR2 993 aaKnown RBP6.49□□□□□ -1.37
XRN1-211ENST00000477237 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.49□□□□□ -1.37
XRN1-211ENST00000477237 DRD2P14416 443 aa6.48□□□□□ -1.37
XRN1-211ENST00000477237 ACPPP15309 386 aa6.48□□□□□ -1.37
XRN1-211ENST00000477237 GATA6Q92908 595 aa6.48□□□□□ -1.37
XRN1-211ENST00000477237 SUGCTQ9HAC7 445 aa6.48□□□□□ -1.37
XRN1-211ENST00000477237 NFKBIEO00221 500 aa6.47□□□□□ -1.37
XRN1-211ENST00000477237 FARP2O94887 1054 aaPredicted RBP6.47□□□□□ -1.37
XRN1-211ENST00000477237 DLGAP3O95886 979 aa6.47□□□□□ -1.37
XRN1-211ENST00000477237 UBTFP17480 764 aaKnown RBP6.47□□□□□ -1.37
XRN1-211ENST00000477237 USP11P51784 963 aa6.47□□□□□ -1.37
XRN1-211ENST00000477237 C19orf57Q0VDD7 668 aa6.47□□□□□ -1.37
XRN1-211ENST00000477237 VRTNQ9H8Y1 702 aa6.47□□□□□ -1.37
XRN1-211ENST00000477237 KANSL3Q9P2N6 904 aa6.47□□□□□ -1.37
XRN1-211ENST00000477237 TNFRSF10BO14763 440 aa6.46□□□□□ -1.38
XRN1-211ENST00000477237 TMEM132AQ24JP5 1023 aa6.46□□□□□ -1.38
XRN1-211ENST00000477237 ZNF792Q3KQV3 632 aa6.46□□□□□ -1.38
XRN1-211ENST00000477237 ZNF574Q6ZN55 896 aaPredicted RBP6.46□□□□□ -1.38
XRN1-211ENST00000477237 WFDC3Q8IUB2 231 aa6.46□□□□□ -1.38
XRN1-211ENST00000477237 PPP1R12CQ9BZL4 782 aa6.46□□□□□ -1.38
XRN1-211ENST00000477237 LRRC4CQ9HCJ2 640 aa6.46□□□□□ -1.38
XRN1-211ENST00000477237 CYP4F12Q9HCS2 524 aa6.46□□□□□ -1.38
XRN1-211ENST00000477237 FAM13BQ9NYF5 915 aa6.46□□□□□ -1.38
XRN1-211ENST00000477237 SOX13Q9UN79 622 aa6.46□□□□□ -1.38
XRN1-211ENST00000477237 FNDC3AQ9Y2H6 1198 aaKnown RBP6.46□□□□□ -1.38
XRN1-211ENST00000477237 LOC100289279A0A1B0GTE1 492 aa6.45□□□□□ -1.38
XRN1-211ENST00000477237 BIN1O00499 593 aa6.45□□□□□ -1.38
XRN1-211ENST00000477237 TRPA1O75762 1119 aa6.45□□□□□ -1.38
XRN1-211ENST00000477237 ZNF865P0CJ78 1059 aaPredicted RBP6.45□□□□□ -1.38
XRN1-211ENST00000477237 ZAP70P43403 619 aa6.45□□□□□ -1.38
XRN1-211ENST00000477237 ARL4DP49703 201 aa6.45□□□□□ -1.38
XRN1-211ENST00000477237 PKN1Q16512 942 aa6.45□□□□□ -1.38
XRN1-211ENST00000477237 C16orf46Q6P387 395 aa6.45□□□□□ -1.38
XRN1-211ENST00000477237 C2CD4AQ8NCU7 369 aaPredicted RBP6.45□□□□□ -1.38
XRN1-211ENST00000477237 GPR152Q8TDT2 470 aa6.45□□□□□ -1.38
XRN1-211ENST00000477237 BCL7CQ8WUZ0 217 aaPredicted RBP6.45□□□□□ -1.38
XRN1-211ENST00000477237 EZH1Q92800 747 aaPredicted RBP6.45□□□□□ -1.38
XRN1-211ENST00000477237 USP26Q9BXU7 913 aa6.45□□□□□ -1.38
XRN1-211ENST00000477237 SOX1O00570 391 aaPredicted RBP6.44□□□□□ -1.38
XRN1-211ENST00000477237 PLCL1Q15111 1095 aa6.44□□□□□ -1.38
XRN1-211ENST00000477237 SPRED2Q7Z698 418 aa6.44□□□□□ -1.38
XRN1-211ENST00000477237 PRIMPOLQ96LW4 560 aa6.44□□□□□ -1.38
XRN1-211ENST00000477237 HHIPQ96QV1 700 aa6.44□□□□□ -1.38
XRN1-211ENST00000477237 TMEM63CQ9P1W3 806 aa6.44□□□□□ -1.38
XRN1-211ENST00000477237 CNTN3Q9P232 1028 aa6.44□□□□□ -1.38
XRN1-211ENST00000477237 SALL4Q9UJQ4 1053 aa6.44□□□□□ -1.38
XRN1-211ENST00000477237 PDE2AO00408 941 aaPredicted RBP6.43□□□□□ -1.38
XRN1-211ENST00000477237 DUSP27Q5VZP5 1158 aa6.43□□□□□ -1.38
XRN1-211ENST00000477237 ZNF765Q7L2R6 523 aa6.43□□□□□ -1.38
XRN1-211ENST00000477237 KSR1Q8IVT5 923 aa6.43□□□□□ -1.38
XRN1-211ENST00000477237 FAM200AQ8TCP9 573 aa6.43□□□□□ -1.38
XRN1-211ENST00000477237 ELP3Q9H9T3 547 aa6.43□□□□□ -1.38
XRN1-211ENST00000477237 DZANK1Q9NVP4 752 aa6.43□□□□□ -1.38
XRN1-211ENST00000477237 SLC5A6Q9Y289 635 aa6.43□□□□□ -1.38
XRN1-211ENST00000477237 LMOD1P29536 600 aaPredicted RBP6.42□□□□□ -1.38
XRN1-211ENST00000477237 FAM168AQ92567 244 aa6.42□□□□□ -1.38
XRN1-211ENST00000477237 ZBTB39O15060 712 aa6.41□□□□□ -1.38
XRN1-211ENST00000477237 SOX4Q06945 474 aaPredicted RBP6.41□□□□□ -1.38
XRN1-211ENST00000477237 KRTAP19-4Q3LI73 84 aa6.41□□□□□ -1.38
XRN1-211ENST00000477237 EXOSC6Q5RKV6 272 aaKnown RBP6.41□□□□□ -1.38
XRN1-211ENST00000477237 CAPN12Q6ZSI9 719 aa6.41□□□□□ -1.38
XRN1-211ENST00000477237 ATG4DQ86TL0 474 aaPredicted RBP6.41□□□□□ -1.38
XRN1-211ENST00000477237 GLIS3Q8NEA6 775 aa6.41□□□□□ -1.38
XRN1-211ENST00000477237 NFICP08651 508 aa6.4□□□□□ -1.38
XRN1-211ENST00000477237 IKBKEQ14164 716 aa6.4□□□□□ -1.38
XRN1-211ENST00000477237 VN1R5Q7Z5H4 357 aa6.4□□□□□ -1.38
XRN1-211ENST00000477237 CILP2Q8IUL8 1156 aa6.4□□□□□ -1.38
XRN1-211ENST00000477237 TMEM40Q8WWA1 233 aa6.4□□□□□ -1.38
XRN1-211ENST00000477237 YIPF2Q9BWQ6 316 aa6.4□□□□□ -1.38
XRN1-211ENST00000477237 PRMT3O60678 531 aa6.39□□□□□ -1.39
XRN1-211ENST00000477237 CYP27A1Q02318 531 aa6.39□□□□□ -1.39
XRN1-211ENST00000477237 MESP2Q0VG99 397 aa6.39□□□□□ -1.39
XRN1-211ENST00000477237 BNIP3Q12983 259 aa6.39□□□□□ -1.39
XRN1-211ENST00000477237 OCLNQ16625 522 aa6.39□□□□□ -1.39
XRN1-211ENST00000477237 PDE12Q6L8Q7 609 aaKnown RBP6.39□□□□□ -1.39
XRN1-211ENST00000477237 C1orf127Q8N9H9 656 aa6.39□□□□□ -1.39
XRN1-211ENST00000477237 SLC38A3Q99624 504 aa6.39□□□□□ -1.39
XRN1-211ENST00000477237 NAA30Q147X3 362 aaPredicted RBP6.38□□□□□ -1.39
XRN1-211ENST00000477237 FNBP4Q8N3X1 1017 aaPredicted RBP6.38□□□□□ -1.39
XRN1-211ENST00000477237 TMEM102Q8N9M5 508 aaPredicted RBP6.38□□□□□ -1.39
XRN1-211ENST00000477237 RC3H2Q9HBD1 1191 aaKnown RBP6.38□□□□□ -1.39
XRN1-211ENST00000477237 ACTL7BQ9Y614 415 aa6.38□□□□□ -1.39
XRN1-211ENST00000477237 RNASE1P07998 156 aaKnown RBP6.37□□□□□ -1.39
XRN1-211ENST00000477237 ADH5P11766 374 aa6.37□□□□□ -1.39
XRN1-211ENST00000477237 CES1P23141 567 aa6.37□□□□□ -1.39
XRN1-211ENST00000477237 FLIIQ13045 1269 aa6.37□□□□□ -1.39
XRN1-211ENST00000477237 LILRA6Q6PI73 481 aa6.37□□□□□ -1.39
XRN1-211ENST00000477237 ZNF438Q7Z4V0 828 aa6.37□□□□□ -1.39
XRN1-211ENST00000477237 STK11IPQ8N1F8 1099 aa6.37□□□□□ -1.39
XRN1-211ENST00000477237 BSNDQ8WZ55 320 aa6.37□□□□□ -1.39
XRN1-211ENST00000477237 NXPE3Q969Y0 559 aa6.37□□□□□ -1.39
XRN1-211ENST00000477237 NUDT16Q96DE0 195 aaKnown RBP6.37□□□□□ -1.39
XRN1-211ENST00000477237 MKNK1Q9BUB5 465 aa6.37□□□□□ -1.39
XRN1-211ENST00000477237 SEMA6CQ9H3T2 930 aa6.37□□□□□ -1.39
XRN1-211ENST00000477237 MBNL3Q9NUK0 354 aaKnown RBP6.37□□□□□ -1.39
XRN1-211ENST00000477237 ADAMTS6Q9UKP5 1117 aa6.37□□□□□ -1.39
XRN1-211ENST00000477237 NCANO14594 1321 aa6.36□□□□□ -1.39
XRN1-211ENST00000477237 RAB6AP20340 208 aa6.36□□□□□ -1.39
XRN1-211ENST00000477237 FUT4P22083 530 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms