RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 UBE3CQ15386 1083 aa13.6□□□□□ -0.23
NUP188-205ENST00000477069 CSPP1Q1MSJ5 1256 aa13.6□□□□□ -0.23
NUP188-205ENST00000477069 LINC00116Q8NCU8 138 aa13.6□□□□□ -0.23
NUP188-205ENST00000477069 NSUN7Q8NE18 718 aaKnown RBP13.6□□□□□ -0.23
NUP188-205ENST00000477069 SEC31BQ9NQW1 1179 aa13.6□□□□□ -0.23
NUP188-205ENST00000477069 TAF1LQ8IZX4 1826 aa13.6□□□□□ -0.23
NUP188-205ENST00000477069 HSP90B1P14625 803 aaKnown RBP13.6□□□□□ -0.23
NUP188-205ENST00000477069 APOBRQ0VD83 1088 aa13.6□□□□□ -0.23
NUP188-205ENST00000477069 ZSCAN25Q6NSZ9 544 aa13.6□□□□□ -0.23
NUP188-205ENST00000477069 TAF1P21675 1872 aa13.6□□□□□ -0.23
NUP188-205ENST00000477069 FAM98CQ17RN3 349 aaKnown RBP13.6□□□□□ -0.23
NUP188-205ENST00000477069 CCDC183Q5T5S1 534 aa13.6□□□□□ -0.23
NUP188-205ENST00000477069 MB21D2Q8IYB1 491 aaPredicted RBP13.6□□□□□ -0.23
NUP188-205ENST00000477069 ZNF274Q96GC6 653 aaPredicted RBP13.6□□□□□ -0.23
NUP188-205ENST00000477069 NIP7Q9Y221 180 aaKnown RBP eCLIP13.6□□□□□ -0.23
NUP188-205ENST00000477069 A0A0G2JS52 829 aa13.59□□□□□ -0.23
NUP188-205ENST00000477069 PHF14O94880 888 aa13.59□□□□□ -0.23
NUP188-205ENST00000477069 IMMTQ16891 758 aaKnown RBP13.59□□□□□ -0.23
NUP188-205ENST00000477069 TTC6Q86TZ1 520 aa13.59□□□□□ -0.23
NUP188-205ENST00000477069 KLHL34Q8N239 644 aa13.59□□□□□ -0.23
NUP188-205ENST00000477069 PDLIM2Q96JY6 352 aa13.59□□□□□ -0.23
NUP188-205ENST00000477069 NBPF3Q9H094 633 aa13.59□□□□□ -0.23
NUP188-205ENST00000477069 RESTQ13127 1097 aa13.59□□□□□ -0.23
NUP188-205ENST00000477069 CCDC152Q4G0S7 254 aa13.59□□□□□ -0.23
NUP188-205ENST00000477069 CLEC4GQ6UXB4 293 aa13.59□□□□□ -0.23
NUP188-205ENST00000477069 HELBQ8NG08 1087 aaPredicted RBP13.59□□□□□ -0.23
NUP188-205ENST00000477069 CNTNAP4Q9C0A0 1308 aa13.59□□□□□ -0.23
NUP188-205ENST00000477069 RGL2O15211 777 aa13.58□□□□□ -0.24
NUP188-205ENST00000477069 PDIA3P30101 505 aaKnown RBP13.58□□□□□ -0.24
NUP188-205ENST00000477069 SLC9C2Q5TAH2 1124 aa13.58□□□□□ -0.24
NUP188-205ENST00000477069 FERMT3Q86UX7 667 aa13.58□□□□□ -0.24
NUP188-205ENST00000477069 CERKQ8TCT0 537 aa13.58□□□□□ -0.24
NUP188-205ENST00000477069 SBF2Q86WG5 1849 aa13.58□□□□□ -0.24
NUP188-205ENST00000477069 WDR19Q8NEZ3 1342 aa13.58□□□□□ -0.24
NUP188-205ENST00000477069 ECM29Q5VYK3 1845 aa13.58□□□□□ -0.24
NUP188-205ENST00000477069 SLC5A1P13866 664 aa13.58□□□□□ -0.24
NUP188-205ENST00000477069 KRT85P78386 507 aa13.58□□□□□ -0.24
NUP188-205ENST00000477069 TSPY26PQ9H489 355 aa13.58□□□□□ -0.24
NUP188-205ENST00000477069 WWC3Q9ULE0 1092 aa13.58□□□□□ -0.24
NUP188-205ENST00000477069 FAM177BA6PVY3 158 aa13.57□□□□□ -0.24
NUP188-205ENST00000477069 PDE6AP16499 860 aa13.57□□□□□ -0.24
NUP188-205ENST00000477069 FAM173BQ6P4H8 233 aa13.57□□□□□ -0.24
NUP188-205ENST00000477069 ZNF532Q9HCE3 1301 aa13.57□□□□□ -0.24
NUP188-205ENST00000477069 ANTXR2P58335 489 aa13.57□□□□□ -0.24
NUP188-205ENST00000477069 HAND2P61296 217 aa13.57□□□□□ -0.24
NUP188-205ENST00000477069 RASGRF1Q13972 1273 aa13.57□□□□□ -0.24
NUP188-205ENST00000477069 CHST3Q7LGC8 479 aa13.57□□□□□ -0.24
NUP188-205ENST00000477069 FNBP4Q8N3X1 1017 aaPredicted RBP13.57□□□□□ -0.24
NUP188-205ENST00000477069 SPATA5Q8NB90 893 aa13.57□□□□□ -0.24
NUP188-205ENST00000477069 ZNF652Q9Y2D9 606 aa13.57□□□□□ -0.24
NUP188-205ENST00000477069 FGD1P98174 961 aa13.57□□□□□ -0.24
NUP188-205ENST00000477069 MPHOSPH8Q99549 860 aa13.57□□□□□ -0.24
NUP188-205ENST00000477069 FUCA2Q9BTY2 467 aa13.57□□□□□ -0.24
NUP188-205ENST00000477069 ZMYM6O95789 1325 aa13.57□□□□□ -0.24
NUP188-205ENST00000477069 PTPDC1A2A3K4 754 aa13.56□□□□□ -0.24
NUP188-205ENST00000477069 SNAP23O00161 211 aa13.56□□□□□ -0.24
NUP188-205ENST00000477069 HMGN5P82970 282 aaKnown RBP13.56□□□□□ -0.24
NUP188-205ENST00000477069 LETM1O95202 739 aaPredicted RBP13.56□□□□□ -0.24
NUP188-205ENST00000477069 NAA16Q6N069 864 aaPredicted RBP13.56□□□□□ -0.24
NUP188-205ENST00000477069 PTF1AQ7RTS3 328 aa13.56□□□□□ -0.24
NUP188-205ENST00000477069 DDX11Q96FC9 970 aa13.56□□□□□ -0.24
NUP188-205ENST00000477069 GPHNQ9NQX3 736 aaPredicted RBP13.56□□□□□ -0.24
NUP188-205ENST00000477069 IDH1O75874 414 aaKnown RBP13.55□□□□□ -0.24
NUP188-205ENST00000477069 NCOA7Q8NI08 942 aa13.55□□□□□ -0.24
NUP188-205ENST00000477069 C8orf37Q96NL8 207 aa13.55□□□□□ -0.24
NUP188-205ENST00000477069 NCOA5Q9HCD5 579 aaKnown RBP13.55□□□□□ -0.24
NUP188-205ENST00000477069 ZNF213O14771 459 aa13.55□□□□□ -0.24
NUP188-205ENST00000477069 MCM5P33992 734 aa13.55□□□□□ -0.24
NUP188-205ENST00000477069 IGHMBP2P38935 993 aaKnown RBP13.55□□□□□ -0.24
NUP188-205ENST00000477069 SF3B3Q15393 1217 aaKnown RBP13.55□□□□□ -0.24
NUP188-205ENST00000477069 C3orf67Q6ZVT6 689 aa13.55□□□□□ -0.24
NUP188-205ENST00000477069 TBC1D10CQ8IV04 446 aa13.55□□□□□ -0.24
NUP188-205ENST00000477069 STRBPQ96SI9 672 aaKnown RBP13.55□□□□□ -0.24
NUP188-205ENST00000477069 SCAND2PQ9GZW5 306 aaPredicted RBP13.55□□□□□ -0.24
NUP188-205ENST00000477069 ZSCAN16Q9H4T2 348 aaPredicted RBP13.55□□□□□ -0.24
NUP188-205ENST00000477069 BCL2L12Q9HB09 334 aa13.55□□□□□ -0.24
NUP188-205ENST00000477069 HPS5Q9UPZ3 1129 aa13.55□□□□□ -0.24
NUP188-205ENST00000477069 PRC1O43663 620 aa13.54□□□□□ -0.24
NUP188-205ENST00000477069 ADD1P35611 737 aaKnown RBP13.54□□□□□ -0.24
NUP188-205ENST00000477069 CCT2P78371 535 aaKnown RBP13.54□□□□□ -0.24
NUP188-205ENST00000477069 CHRNDQ07001 517 aa13.54□□□□□ -0.24
NUP188-205ENST00000477069 ALX1Q15699 326 aa13.54□□□□□ -0.24
NUP188-205ENST00000477069 ERFEQ4G0M1 354 aa13.54□□□□□ -0.24
NUP188-205ENST00000477069 NKX2-3Q8TAU0 364 aa13.54□□□□□ -0.24
NUP188-205ENST00000477069 LEO1Q8WVC0 666 aaPredicted RBP13.54□□□□□ -0.24
NUP188-205ENST00000477069 CACNA1SQ13698 1873 aa13.54□□□□□ -0.24
NUP188-205ENST00000477069 CARMIL3Q8ND23 1372 aa13.54□□□□□ -0.24
NUP188-205ENST00000477069 ZNF804BA4D1E1 1349 aa13.54□□□□□ -0.24
NUP188-205ENST00000477069 FDPSP14324 419 aaKnown RBP13.54□□□□□ -0.24
NUP188-205ENST00000477069 ANP32BQ92688 251 aaKnown RBP13.54□□□□□ -0.24
NUP188-205ENST00000477069 FAM184AQ8NB25 1140 aa13.53□□□□□ -0.24
NUP188-205ENST00000477069 COL1A1P02452 1464 aaPredicted RBP13.53□□□□□ -0.24
NUP188-205ENST00000477069 RC3H1Q5TC82 1133 aaKnown RBP13.53□□□□□ -0.24
NUP188-205ENST00000477069 NGLY1Q96IV0 654 aa13.53□□□□□ -0.24
NUP188-205ENST00000477069 DENND2AQ9ULE3 1009 aa13.53□□□□□ -0.24
NUP188-205ENST00000477069 MYH13Q9UKX3 1938 aa13.53□□□□□ -0.24
NUP188-205ENST00000477069 ESPNB1AK53 854 aa13.53□□□□□ -0.24
NUP188-205ENST00000477069 CLCN1P35523 988 aa13.53□□□□□ -0.24
NUP188-205ENST00000477069 BCAMP50895 628 aa13.53□□□□□ -0.24
NUP188-205ENST00000477069 KCNQ4P56696 695 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms