RNA–Protein interactions for RNA: ENST00000475955.1

SEMA3C-208, Transcript of semaphorin 3C, humanhuman

TSL 4

Gene SEMA3C, Length 383 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-208ENST00000475955 USP17L4A6NCW7 530 aa11.75□□□□□ -0.53
SEMA3C-208ENST00000475955 RASSF10A6NK89 507 aa11.75□□□□□ -0.53
SEMA3C-208ENST00000475955 RBM25P49756 843 aaKnown RBP11.75□□□□□ -0.53
SEMA3C-208ENST00000475955 VEGFBP49765 207 aa11.75□□□□□ -0.53
SEMA3C-208ENST00000475955 ZNF280AP59817 542 aaPredicted RBP11.75□□□□□ -0.53
SEMA3C-208ENST00000475955 SKOR2Q2VWA4 1001 aaPredicted RBP11.75□□□□□ -0.53
SEMA3C-208ENST00000475955 RABL6Q3YEC7 729 aaPredicted RBP11.75□□□□□ -0.53
SEMA3C-208ENST00000475955 DACT2Q5SW24 774 aa11.75□□□□□ -0.53
SEMA3C-208ENST00000475955 USP17L1Q7RTZ2 530 aa11.75□□□□□ -0.53
SEMA3C-208ENST00000475955 SLKQ9H2G2 1235 aaPredicted RBP11.75□□□□□ -0.53
SEMA3C-208ENST00000475955 BICC1Q9H694 974 aaKnown RBP11.75□□□□□ -0.53
SEMA3C-208ENST00000475955 THSD7BQ9C0I4 1608 aa11.75□□□□□ -0.53
SEMA3C-208ENST00000475955 ECM29Q5VYK3 1845 aa11.74□□□□□ -0.53
SEMA3C-208ENST00000475955 GOLGA6L3A6NEY3 463 aa11.74□□□□□ -0.53
SEMA3C-208ENST00000475955 NUCB1Q02818 461 aa11.74□□□□□ -0.53
SEMA3C-208ENST00000475955 CCDC57Q2TAC2 916 aa11.74□□□□□ -0.53
SEMA3C-208ENST00000475955 KIF4BQ2VIQ3 1234 aa11.74□□□□□ -0.53
SEMA3C-208ENST00000475955 LDHAL6AQ6ZMR3 332 aa11.74□□□□□ -0.53
SEMA3C-208ENST00000475955 USP48Q86UV5 1035 aa11.74□□□□□ -0.53
SEMA3C-208ENST00000475955 AGBL3Q8NEM8 1001 aa11.74□□□□□ -0.53
SEMA3C-208ENST00000475955 COA1Q9GZY4 146 aa11.74□□□□□ -0.53
SEMA3C-208ENST00000475955 NOB1Q9ULX3 412 aaKnown RBP11.74□□□□□ -0.53
SEMA3C-208ENST00000475955 HSPA1AP0DMV8 641 aaKnown RBP11.73□□□□□ -0.53
SEMA3C-208ENST00000475955 HSPA1BP0DMV9 641 aaKnown RBP11.73□□□□□ -0.53
SEMA3C-208ENST00000475955 DEFB115Q30KQ5 88 aa11.73□□□□□ -0.53
SEMA3C-208ENST00000475955 BMP2KLQ5H9B9 411 aa11.73□□□□□ -0.53
SEMA3C-208ENST00000475955 C15orf52Q6ZUT6 534 aaKnown RBP11.73□□□□□ -0.53
SEMA3C-208ENST00000475955 CDC37L1Q7L3B6 337 aa11.73□□□□□ -0.53
SEMA3C-208ENST00000475955 GBP4Q96PP9 640 aa11.73□□□□□ -0.53
SEMA3C-208ENST00000475955 CD209Q9NNX6 404 aa11.73□□□□□ -0.53
SEMA3C-208ENST00000475955 RIPOR2Q9Y4F9 1068 aa11.73□□□□□ -0.53
SEMA3C-208ENST00000475955 ADM5C9JUS6 153 aa11.72□□□□□ -0.53
SEMA3C-208ENST00000475955 CELF2O95319 508 aaKnown RBP11.72□□□□□ -0.53
SEMA3C-208ENST00000475955 USP17L8P0C7I0 530 aa11.72□□□□□ -0.53
SEMA3C-208ENST00000475955 MRE11P49959 708 aa11.72□□□□□ -0.53
SEMA3C-208ENST00000475955 LRRC24Q50LG9 513 aa11.72□□□□□ -0.53
SEMA3C-208ENST00000475955 STRIP1Q5VSL9 837 aa11.72□□□□□ -0.53
SEMA3C-208ENST00000475955 CERS5Q8N5B7 392 aa11.72□□□□□ -0.53
SEMA3C-208ENST00000475955 KLHDC4Q8TBB5 520 aa11.72□□□□□ -0.53
SEMA3C-208ENST00000475955 CNNM1Q9NRU3 951 aa11.72□□□□□ -0.53
SEMA3C-208ENST00000475955 ABT1Q9ULW3 272 aaKnown RBP11.72□□□□□ -0.53
SEMA3C-208ENST00000475955 TNNQ9UQP3 1299 aa11.72□□□□□ -0.53
SEMA3C-208ENST00000475955 TLL2Q9Y6L7 1015 aa11.72□□□□□ -0.53
SEMA3C-208ENST00000475955 MYH13Q9UKX3 1938 aa11.72□□□□□ -0.53
SEMA3C-208ENST00000475955 ARAP2Q8WZ64 1704 aa11.72□□□□□ -0.53
SEMA3C-208ENST00000475955 WDR33Q9C0J8 1336 aaKnown RBP11.71□□□□□ -0.53
SEMA3C-208ENST00000475955 KCNJ4P48050 445 aa11.71□□□□□ -0.53
SEMA3C-208ENST00000475955 RFX5P48382 616 aaPredicted RBP11.71□□□□□ -0.53
SEMA3C-208ENST00000475955 MFAP1P55081 439 aaKnown RBP11.71□□□□□ -0.53
SEMA3C-208ENST00000475955 GTF2IP78347 998 aa11.71□□□□□ -0.53
SEMA3C-208ENST00000475955 SCARF1Q14162 830 aa11.71□□□□□ -0.53
SEMA3C-208ENST00000475955 TAF7LQ5H9L4 462 aa11.71□□□□□ -0.53
SEMA3C-208ENST00000475955 TTLL5Q6EMB2 1281 aa11.71□□□□□ -0.53
SEMA3C-208ENST00000475955 SAPCD2Q86UD0 394 aa11.71□□□□□ -0.53
SEMA3C-208ENST00000475955 CHD1LQ86WJ1 897 aa11.71□□□□□ -0.53
SEMA3C-208ENST00000475955 TMEM57Q8N5G2 664 aa11.71□□□□□ -0.53
SEMA3C-208ENST00000475955 API5Q9BZZ5 524 aaKnown RBP11.71□□□□□ -0.53
SEMA3C-208ENST00000475955 MYOZ2Q9NPC6 264 aa11.71□□□□□ -0.53
SEMA3C-208ENST00000475955 GGA3Q9NZ52 723 aa11.71□□□□□ -0.53
SEMA3C-208ENST00000475955 SCAF8Q9UPN6 1271 aaKnown RBP11.71□□□□□ -0.53
SEMA3C-208ENST00000475955 FSD2A1L4K1 749 aa11.7□□□□□ -0.54
SEMA3C-208ENST00000475955 IL1R1P14778 569 aa11.7□□□□□ -0.54
SEMA3C-208ENST00000475955 NBPF9Q3BBW0 867 aa11.7□□□□□ -0.54
SEMA3C-208ENST00000475955 COL13A1Q5TAT6 717 aaPredicted RBP11.7□□□□□ -0.54
SEMA3C-208ENST00000475955 ANGEL2Q5VTE6 544 aaKnown RBP11.7□□□□□ -0.54
SEMA3C-208ENST00000475955 CYP4F22Q6NT55 531 aa11.7□□□□□ -0.54
SEMA3C-208ENST00000475955 KRT26Q7Z3Y9 468 aa11.7□□□□□ -0.54
SEMA3C-208ENST00000475955 VGLL2Q8N8G2 317 aa11.7□□□□□ -0.54
SEMA3C-208ENST00000475955 FBXW7Q969H0 707 aa11.7□□□□□ -0.54
SEMA3C-208ENST00000475955 ZNF408Q9H9D4 720 aa11.7□□□□□ -0.54
SEMA3C-208ENST00000475955 GYG1P46976 350 aa11.69□□□□□ -0.54
SEMA3C-208ENST00000475955 KIAA0825Q8IV33 1275 aa11.69□□□□□ -0.54
SEMA3C-208ENST00000475955 DCPSQ96C86 337 aaKnown RBP11.69□□□□□ -0.54
SEMA3C-208ENST00000475955 ZBED3Q96IU2 234 aaPredicted RBP11.69□□□□□ -0.54
SEMA3C-208ENST00000475955 CAPNS2Q96L46 248 aa11.69□□□□□ -0.54
SEMA3C-208ENST00000475955 RTN4Q9NQC3 1192 aaKnown RBP11.69□□□□□ -0.54
SEMA3C-208ENST00000475955 JAG2Q9Y219 1238 aa11.69□□□□□ -0.54
SEMA3C-208ENST00000475955 PCDHAC2Q9Y5I4 1007 aa11.69□□□□□ -0.54
SEMA3C-208ENST00000475955 GOLGA6L22H0YM25 854 aa11.68□□□□□ -0.54
SEMA3C-208ENST00000475955 WNT10BO00744 389 aa11.68□□□□□ -0.54
SEMA3C-208ENST00000475955 FOXN1O15353 648 aa11.68□□□□□ -0.54
SEMA3C-208ENST00000475955 TRAK2O60296 914 aa11.68□□□□□ -0.54
SEMA3C-208ENST00000475955 AOC2O75106 756 aa11.68□□□□□ -0.54
SEMA3C-208ENST00000475955 UBE4AQ14139 1066 aa11.68□□□□□ -0.54
SEMA3C-208ENST00000475955 FAM84BQ96KN1 310 aaPredicted RBP11.68□□□□□ -0.54
SEMA3C-208ENST00000475955 MEIS3Q99687 375 aa11.68□□□□□ -0.54
SEMA3C-208ENST00000475955 WBP1LQ9NX94 342 aa11.68□□□□□ -0.54
SEMA3C-208ENST00000475955 AOX1Q06278 1338 aa11.67□□□□□ -0.54
SEMA3C-208ENST00000475955 MROH5Q6ZUA9 1318 aa11.67□□□□□ -0.54
SEMA3C-208ENST00000475955 MYO3BQ8WXR4 1341 aa11.67□□□□□ -0.54
SEMA3C-208ENST00000475955 SASH1O94885 1247 aa11.67□□□□□ -0.54
SEMA3C-208ENST00000475955 PTPN12Q05209 780 aaKnown RBP11.67□□□□□ -0.54
SEMA3C-208ENST00000475955 INTS3Q68E01 1043 aaKnown RBP11.67□□□□□ -0.54
SEMA3C-208ENST00000475955 ATG9AQ7Z3C6 839 aa11.67□□□□□ -0.54
SEMA3C-208ENST00000475955 ZNF804AQ7Z570 1209 aa11.67□□□□□ -0.54
SEMA3C-208ENST00000475955 TDRD7Q8NHU6 1098 aaKnown RBP11.67□□□□□ -0.54
SEMA3C-208ENST00000475955 CDCA5Q96FF9 252 aa11.67□□□□□ -0.54
SEMA3C-208ENST00000475955 ZIC5Q96T25 663 aa11.67□□□□□ -0.54
SEMA3C-208ENST00000475955 LRRFIP2Q9Y608 721 aaKnown RBP11.67□□□□□ -0.54
SEMA3C-208ENST00000475955 FAM205AQ6ZU69 1335 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms