RNA–Protein interactions for RNA: ENST00000475560.5

SRGAP3-205, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 703 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-205ENST00000475560 ZNF165P49910 485 aa6.83□□□□□ -1.32
SRGAP3-205ENST00000475560 RPS26P62854 115 aaKnown RBP6.83□□□□□ -1.32
SRGAP3-205ENST00000475560 TYRO3Q06418 890 aa6.83□□□□□ -1.32
SRGAP3-205ENST00000475560 LAPTM4AQ15012 233 aa6.83□□□□□ -1.32
SRGAP3-205ENST00000475560 DALRD3Q5D0E6 543 aaKnown RBP6.83□□□□□ -1.32
SRGAP3-205ENST00000475560 ARSJQ5FYB0 599 aaPredicted RBP6.83□□□□□ -1.32
SRGAP3-205ENST00000475560 ODR4Q5SWX8 454 aa6.83□□□□□ -1.32
SRGAP3-205ENST00000475560 FBXW10Q5XX13 1052 aa6.83□□□□□ -1.32
SRGAP3-205ENST00000475560 PRPF38AQ8NAV1 312 aaKnown RBP6.83□□□□□ -1.32
SRGAP3-205ENST00000475560 FBXO27Q8NI29 283 aa6.83□□□□□ -1.32
SRGAP3-205ENST00000475560 CEP63Q96MT8 703 aa6.83□□□□□ -1.32
SRGAP3-205ENST00000475560 NECAB3Q96P71 396 aaPredicted RBP6.83□□□□□ -1.32
SRGAP3-205ENST00000475560 FERD3LQ96RJ6 166 aa6.83□□□□□ -1.32
SRGAP3-205ENST00000475560 CEP89Q96ST8 783 aa6.83□□□□□ -1.32
SRGAP3-205ENST00000475560 TNKS2Q9H2K2 1166 aa6.83□□□□□ -1.32
SRGAP3-205ENST00000475560 ZFAND3Q9H8U3 227 aa6.83□□□□□ -1.32
SRGAP3-205ENST00000475560 DZANK1Q9NVP4 752 aa6.83□□□□□ -1.32
SRGAP3-205ENST00000475560 KANSL3Q9P2N6 904 aa6.83□□□□□ -1.32
SRGAP3-205ENST00000475560 PRR12Q9ULL5 1215 aa6.83□□□□□ -1.32
SRGAP3-205ENST00000475560 MTERF2Q49AM1 385 aa6.82□□□□□ -1.32
SRGAP3-205ENST00000475560 TMED8Q6PL24 325 aaPredicted RBP6.82□□□□□ -1.32
SRGAP3-205ENST00000475560 BNC2Q6ZN30 1099 aaPredicted RBP6.82□□□□□ -1.32
SRGAP3-205ENST00000475560 CCDC84Q86UT8 332 aaPredicted RBP6.82□□□□□ -1.32
SRGAP3-205ENST00000475560 CCNJLQ8IV13 435 aa6.82□□□□□ -1.32
SRGAP3-205ENST00000475560 TRIM42Q8IWZ5 723 aa6.82□□□□□ -1.32
SRGAP3-205ENST00000475560 SMC5Q8IY18 1101 aa6.82□□□□□ -1.32
SRGAP3-205ENST00000475560 CCDC146Q8IYE0 955 aa6.82□□□□□ -1.32
SRGAP3-205ENST00000475560 SYNPOQ8N3V7 929 aa6.82□□□□□ -1.32
SRGAP3-205ENST00000475560 PMM1Q92871 262 aa6.82□□□□□ -1.32
SRGAP3-205ENST00000475560 PLD4Q96BZ4 506 aa6.82□□□□□ -1.32
SRGAP3-205ENST00000475560 ENC1O14682 589 aa6.81□□□□□ -1.32
SRGAP3-205ENST00000475560 SASH3O75995 380 aa6.81□□□□□ -1.32
SRGAP3-205ENST00000475560 ASMTLO95671 621 aa6.81□□□□□ -1.32
SRGAP3-205ENST00000475560 F13A1P00488 732 aa6.81□□□□□ -1.32
SRGAP3-205ENST00000475560 CASP7P55210 303 aa6.81□□□□□ -1.32
SRGAP3-205ENST00000475560 WDR4P57081 412 aaKnown RBP6.81□□□□□ -1.32
SRGAP3-205ENST00000475560 TBX4P57082 545 aa6.81□□□□□ -1.32
SRGAP3-205ENST00000475560 EVA1CP58658 441 aa6.81□□□□□ -1.32
SRGAP3-205ENST00000475560 POU4F2Q12837 409 aa6.81□□□□□ -1.32
SRGAP3-205ENST00000475560 LARP1BQ659C4 914 aaKnown RBP6.81□□□□□ -1.32
SRGAP3-205ENST00000475560 JAMLQ86YT9 394 aa6.81□□□□□ -1.32
SRGAP3-205ENST00000475560 OR13H1Q8NG92 308 aa6.81□□□□□ -1.32
SRGAP3-205ENST00000475560 GATAD2BQ8WXI9 593 aa6.81□□□□□ -1.32
SRGAP3-205ENST00000475560 CCDC136Q96JN2 1154 aa6.81□□□□□ -1.32
SRGAP3-205ENST00000475560 SEC31BQ9NQW1 1179 aa6.81□□□□□ -1.32
SRGAP3-205ENST00000475560 THRAP3Q9Y2W1 955 aaKnown RBP6.81□□□□□ -1.32
SRGAP3-205ENST00000475560 A0A1W2PNR3 127 aa6.8□□□□□ -1.32
SRGAP3-205ENST00000475560 FAM221AA4D161 298 aa6.8□□□□□ -1.32
SRGAP3-205ENST00000475560 PHF20L1A8MW92 1017 aa6.8□□□□□ -1.32
SRGAP3-205ENST00000475560 PRC1O43663 620 aa6.8□□□□□ -1.32
SRGAP3-205ENST00000475560 DIAPH1O60610 1272 aaKnown RBP6.8□□□□□ -1.32
SRGAP3-205ENST00000475560 GJB6O95452 261 aa6.8□□□□□ -1.32
SRGAP3-205ENST00000475560 MSX1P28360 303 aa6.8□□□□□ -1.32
SRGAP3-205ENST00000475560 EXOSC10Q01780 885 aaKnown RBP6.8□□□□□ -1.32
SRGAP3-205ENST00000475560 MPP2Q14168 576 aa6.8□□□□□ -1.32
SRGAP3-205ENST00000475560 CWF19L2Q2TBE0 894 aaKnown RBP6.8□□□□□ -1.32
SRGAP3-205ENST00000475560 WDR44Q5JSH3 913 aa6.8□□□□□ -1.32
SRGAP3-205ENST00000475560 KANK3Q6NY19 840 aa6.8□□□□□ -1.32
SRGAP3-205ENST00000475560 SPATC1Q76KD6 591 aa6.8□□□□□ -1.32
SRGAP3-205ENST00000475560 REXO1Q8N1G1 1221 aaKnown RBP6.8□□□□□ -1.32
SRGAP3-205ENST00000475560 RBBP8NLQ8NC74 664 aaPredicted RBP6.8□□□□□ -1.32
SRGAP3-205ENST00000475560 JARID2Q92833 1246 aaPredicted RBP6.8□□□□□ -1.32
SRGAP3-205ENST00000475560 SGSM3Q96HU1 749 aa6.8□□□□□ -1.32
SRGAP3-205ENST00000475560 C8orf48Q96LL4 319 aa6.8□□□□□ -1.32
SRGAP3-205ENST00000475560 INSM2Q96T92 566 aaPredicted RBP6.8□□□□□ -1.32
SRGAP3-205ENST00000475560 RBSNQ9H1K0 784 aa6.8□□□□□ -1.32
SRGAP3-205ENST00000475560 PFDN2Q9UHV9 154 aa6.8□□□□□ -1.32
SRGAP3-205ENST00000475560 ATP8A1Q9Y2Q0 1164 aa6.8□□□□□ -1.32
SRGAP3-205ENST00000475560 PCDHB5Q9Y5E4 795 aa6.8□□□□□ -1.32
SRGAP3-205ENST00000475560 EID1Q9Y6B2 187 aa6.8□□□□□ -1.32
SRGAP3-205ENST00000475560 PTCH2Q9Y6C5 1203 aa6.8□□□□□ -1.32
SRGAP3-205ENST00000475560 PAGE1O75459 146 aa6.79□□□□□ -1.32
SRGAP3-205ENST00000475560 IMPDH2P12268 514 aa6.79□□□□□ -1.32
SRGAP3-205ENST00000475560 ITPKAP23677 461 aa6.79□□□□□ -1.32
SRGAP3-205ENST00000475560 GRIA4P48058 902 aa6.79□□□□□ -1.32
SRGAP3-205ENST00000475560 CDKN1CP49918 316 aaPredicted RBP6.79□□□□□ -1.32
SRGAP3-205ENST00000475560 CLCQ05315 142 aa6.79□□□□□ -1.32
SRGAP3-205ENST00000475560 OSMRQ99650 979 aa6.79□□□□□ -1.32
SRGAP3-205ENST00000475560 ZKSCAN3Q9BRR0 538 aa6.79□□□□□ -1.32
SRGAP3-205ENST00000475560 ZCCHC2Q9C0B9 1178 aaKnown RBP6.79□□□□□ -1.32
SRGAP3-205ENST00000475560 BRMS1Q9HCU9 246 aa6.79□□□□□ -1.32
SRGAP3-205ENST00000475560 TCEAL9Q9UHQ7 104 aa6.79□□□□□ -1.32
SRGAP3-205ENST00000475560 ZNRF3Q9ULT6 936 aa6.79□□□□□ -1.32
SRGAP3-205ENST00000475560 PLAAQ9Y263 795 aa6.79□□□□□ -1.32
SRGAP3-205ENST00000475560 CD2APQ9Y5K6 639 aa6.79□□□□□ -1.32
SRGAP3-205ENST00000475560 KCNQ2O43526 872 aa6.78□□□□□ -1.32
SRGAP3-205ENST00000475560 MMP20O60882 483 aa6.78□□□□□ -1.32
SRGAP3-205ENST00000475560 DDAH1O94760 285 aa6.78□□□□□ -1.32
SRGAP3-205ENST00000475560 TIMP2P16035 220 aa6.78□□□□□ -1.32
SRGAP3-205ENST00000475560 TARSP26639 723 aaKnown RBP6.78□□□□□ -1.32
SRGAP3-205ENST00000475560 CNGA1P29973 690 aa6.78□□□□□ -1.32
SRGAP3-205ENST00000475560 PPP2R5EQ16537 467 aa6.78□□□□□ -1.32
SRGAP3-205ENST00000475560 C21orf62-AS1Q17RA5 79 aa6.78□□□□□ -1.32
SRGAP3-205ENST00000475560 SPRED3Q2MJR0 410 aa6.78□□□□□ -1.32
SRGAP3-205ENST00000475560 BRDTQ58F21 947 aaPredicted RBP6.78□□□□□ -1.32
SRGAP3-205ENST00000475560 GK5Q6ZS86 529 aa6.78□□□□□ -1.32
SRGAP3-205ENST00000475560 ST13P5Q8NFI4 369 aaPredicted RBP6.78□□□□□ -1.32
SRGAP3-205ENST00000475560 CNTNAP3BQ96NU0 1288 aa6.78□□□□□ -1.32
SRGAP3-205ENST00000475560 CNTNAP3Q9BZ76 1288 aa6.78□□□□□ -1.32
SRGAP3-205ENST00000475560 MIR1-1HGQ9H1L0 117 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms