RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 BTBD11A6QL63 1104 aa20.54■□□□□ 0.88
CCM2-207ENST00000475551 SEC31AO94979 1220 aaKnown RBP20.54■□□□□ 0.88
CCM2-207ENST00000475551 MCMDC2Q4G0Z9 681 aa20.54■□□□□ 0.88
CCM2-207ENST00000475551 LMOD2Q6P5Q4 547 aa20.54■□□□□ 0.88
CCM2-207ENST00000475551 STOX1Q6ZVD7 989 aa20.54■□□□□ 0.88
CCM2-207ENST00000475551 LINC00301Q8NCQ3 95 aa20.54■□□□□ 0.88
CCM2-207ENST00000475551 SMARCE1Q969G3 411 aa20.54■□□□□ 0.88
CCM2-207ENST00000475551 CHMP4CQ96CF2 233 aa20.54■□□□□ 0.88
CCM2-207ENST00000475551 TRERF1Q96PN7 1200 aa20.54■□□□□ 0.88
CCM2-207ENST00000475551 ZNF609O15014 1411 aa20.54■□□□□ 0.88
CCM2-207ENST00000475551 FANCGO15287 622 aa20.54■□□□□ 0.88
CCM2-207ENST00000475551 SLC3A2P08195 630 aaKnown RBP20.54■□□□□ 0.88
CCM2-207ENST00000475551 CC2D1AQ6P1N0 951 aaPredicted RBP20.54■□□□□ 0.88
CCM2-207ENST00000475551 GPR161Q8N6U8 529 aaKnown RBP20.54■□□□□ 0.88
CCM2-207ENST00000475551 LTV1Q96GA3 475 aaPredicted RBP20.54■□□□□ 0.88
CCM2-207ENST00000475551 TRIM34Q9BYJ4 488 aa20.54■□□□□ 0.88
CCM2-207ENST00000475551 SIL1Q9H173 461 aa20.54■□□□□ 0.88
CCM2-207ENST00000475551 SASH3O75995 380 aa20.53■□□□□ 0.88
CCM2-207ENST00000475551 OAS2P29728 719 aaKnown RBP20.53■□□□□ 0.88
CCM2-207ENST00000475551 EVCP57679 992 aa20.53■□□□□ 0.88
CCM2-207ENST00000475551 ST5P78524 1137 aa20.53■□□□□ 0.88
CCM2-207ENST00000475551 EXOSC10Q01780 885 aaKnown RBP20.53■□□□□ 0.88
CCM2-207ENST00000475551 APOBRQ0VD83 1088 aa20.53■□□□□ 0.88
CCM2-207ENST00000475551 KCNG4Q8TDN1 519 aa20.53■□□□□ 0.88
CCM2-207ENST00000475551 KRBA2Q6ZNG9 492 aa20.53■□□□□ 0.88
CCM2-207ENST00000475551 MPHOSPH8Q99549 860 aa20.53■□□□□ 0.88
CCM2-207ENST00000475551 NHSL1Q5SYE7 1610 aa20.53■□□□□ 0.88
CCM2-207ENST00000475551 ZSCAN12O43309 604 aa20.52■□□□□ 0.88
CCM2-207ENST00000475551 YEATS4O95619 227 aa20.52■□□□□ 0.88
CCM2-207ENST00000475551 SMC1AQ14683 1233 aaKnown RBP20.52■□□□□ 0.88
CCM2-207ENST00000475551 CCDC129Q6ZRS4 1044 aa20.52■□□□□ 0.88
CCM2-207ENST00000475551 USHBP1Q8N6Y0 703 aa20.52■□□□□ 0.88
CCM2-207ENST00000475551 CBFA2T2O43439 604 aa20.52■□□□□ 0.88
CCM2-207ENST00000475551 TEFQ10587 303 aa20.52■□□□□ 0.88
CCM2-207ENST00000475551 PROSER3Q2NL68 480 aa20.52■□□□□ 0.88
CCM2-207ENST00000475551 CCT2P78371 535 aaKnown RBP20.51■□□□□ 0.87
CCM2-207ENST00000475551 GUCY1B3Q02153 619 aa20.51■□□□□ 0.87
CCM2-207ENST00000475551 ZNF274Q96GC6 653 aaPredicted RBP20.51■□□□□ 0.87
CCM2-207ENST00000475551 SEC62Q99442 399 aaKnown RBP20.51■□□□□ 0.87
CCM2-207ENST00000475551 POLR3EQ9NVU0 708 aa20.51■□□□□ 0.87
CCM2-207ENST00000475551 PSD3Q9NYI0 1048 aa20.51■□□□□ 0.87
CCM2-207ENST00000475551 CARMIL3Q8ND23 1372 aa20.51■□□□□ 0.87
CCM2-207ENST00000475551 STK38Q15208 465 aa20.51■□□□□ 0.87
CCM2-207ENST00000475551 SF3A1Q15459 793 aaKnown RBP20.51■□□□□ 0.87
CCM2-207ENST00000475551 NFATC2IPQ8NCF5 419 aa20.51■□□□□ 0.87
CCM2-207ENST00000475551 FMNL2Q96PY5 1086 aa20.51■□□□□ 0.87
CCM2-207ENST00000475551 HSD3B7Q9H2F3 369 aa20.51■□□□□ 0.87
CCM2-207ENST00000475551 SOS2Q07890 1332 aaPredicted RBP20.51■□□□□ 0.87
CCM2-207ENST00000475551 ZNF202O95125 648 aa20.5■□□□□ 0.87
CCM2-207ENST00000475551 LMOD1P29536 600 aaPredicted RBP20.5■□□□□ 0.87
CCM2-207ENST00000475551 MAP3K9P80192 1104 aa20.5■□□□□ 0.87
CCM2-207ENST00000475551 ZSCAN26Q16670 478 aa20.5■□□□□ 0.87
CCM2-207ENST00000475551 UTP14AQ9BVJ6 771 aaKnown RBP20.5■□□□□ 0.87
CCM2-207ENST00000475551 DBNLQ9UJU6 430 aaKnown RBP20.5■□□□□ 0.87
CCM2-207ENST00000475551 USP54Q70EL1 1684 aa20.5■□□□□ 0.87
CCM2-207ENST00000475551 VWA3AA6NCI4 1184 aa20.49■□□□□ 0.87
CCM2-207ENST00000475551 BIN1O00499 593 aa20.49■□□□□ 0.87
CCM2-207ENST00000475551 PDIA3P30101 505 aaKnown RBP20.49■□□□□ 0.87
CCM2-207ENST00000475551 LAMA4Q16363 1823 aa20.49■□□□□ 0.87
CCM2-207ENST00000475551 RSRC2Q7L4I2 434 aaKnown RBP20.49■□□□□ 0.87
CCM2-207ENST00000475551 NCOA5Q9HCD5 579 aaKnown RBP20.49■□□□□ 0.87
CCM2-207ENST00000475551 ARFGAP3Q9NP61 516 aa20.49■□□□□ 0.87
CCM2-207ENST00000475551 ZCCHC17Q9NP64 241 aaKnown RBP20.49■□□□□ 0.87
CCM2-207ENST00000475551 MARF1Q9Y4F3 1742 aaKnown RBP20.49■□□□□ 0.87
CCM2-207ENST00000475551 CLIC4Q9Y696 253 aa20.49■□□□□ 0.87
CCM2-207ENST00000475551 HEG1Q9ULI3 1381 aa20.49■□□□□ 0.87
CCM2-207ENST00000475551 SH3TC1Q8TE82 1336 aa20.49■□□□□ 0.87
CCM2-207ENST00000475551 GOLGA6L9A6NEM1 432 aa20.49■□□□□ 0.87
CCM2-207ENST00000475551 SPTLC2O15270 562 aa20.49■□□□□ 0.87
CCM2-207ENST00000475551 DDX58O95786 925 aaKnown RBP20.49■□□□□ 0.87
CCM2-207ENST00000475551 UBASH3AP57075 661 aa20.49■□□□□ 0.87
CCM2-207ENST00000475551 KLHDC4Q8TBB5 520 aa20.49■□□□□ 0.87
CCM2-207ENST00000475551 CWC15Q9P013 229 aaKnown RBP20.49■□□□□ 0.87
CCM2-207ENST00000475551 ARHGAP6O43182 974 aa20.48■□□□□ 0.87
CCM2-207ENST00000475551 AKAP4Q5JQC9 854 aa20.48■□□□□ 0.87
CCM2-207ENST00000475551 EXOC4Q96A65 974 aa20.48■□□□□ 0.87
CCM2-207ENST00000475551 AK7Q96M32 723 aa20.48■□□□□ 0.87
CCM2-207ENST00000475551 TNS3Q68CZ2 1445 aa20.48■□□□□ 0.87
CCM2-207ENST00000475551 MYO1BO43795 1136 aa20.48■□□□□ 0.87
CCM2-207ENST00000475551 ATP1A3P13637 1013 aa20.48■□□□□ 0.87
CCM2-207ENST00000475551 FDPSP14324 419 aaKnown RBP20.48■□□□□ 0.87
CCM2-207ENST00000475551 TNNI3KQ59H18 835 aa20.48■□□□□ 0.87
CCM2-207ENST00000475551 VSTM4Q8IW00 320 aa20.48■□□□□ 0.87
CCM2-207ENST00000475551 HAUS7Q99871 368 aa20.48■□□□□ 0.87
CCM2-207ENST00000475551 RASSF4Q9H2L5 321 aa20.48■□□□□ 0.87
CCM2-207ENST00000475551 FPGT-TNNI3KV9GXZ4 949 aa20.48■□□□□ 0.87
CCM2-207ENST00000475551 ALS2Q96Q42 1657 aa20.48■□□□□ 0.87
CCM2-207ENST00000475551 SPATA31A3Q5VYP0 1347 aa20.47■□□□□ 0.87
CCM2-207ENST00000475551 CASQ1P31415 396 aa20.47■□□□□ 0.87
CCM2-207ENST00000475551 GOLGA5Q8TBA6 731 aa20.47■□□□□ 0.87
CCM2-207ENST00000475551 RABGGTAQ92696 567 aa20.47■□□□□ 0.87
CCM2-207ENST00000475551 DSCC1Q9BVC3 393 aa20.47■□□□□ 0.87
CCM2-207ENST00000475551 FUT8Q9BYC5 575 aa20.47■□□□□ 0.87
CCM2-207ENST00000475551 COPRSQ9NQ92 184 aa20.47■□□□□ 0.87
CCM2-207ENST00000475551 PPP2R2CQ9Y2T4 447 aa20.47■□□□□ 0.87
CCM2-207ENST00000475551 MRFAP1Q9Y605 127 aa20.47■□□□□ 0.87
CCM2-207ENST00000475551 LMO7Q8WWI1 1683 aa20.47■□□□□ 0.87
CCM2-207ENST00000475551 CMA1P23946 247 aa20.47■□□□□ 0.87
CCM2-207ENST00000475551 TUBE1Q9UJT0 475 aa20.47■□□□□ 0.87
CCM2-207ENST00000475551 CHGBP05060 677 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms