RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 KRT24Q2M2I5 525 aa9.32□□□□□ -0.92
CCDC93-208ENST00000474546 CCDC158Q5M9N0 1113 aa9.32□□□□□ -0.92
CCDC93-208ENST00000474546 G2E3Q7L622 706 aa9.32□□□□□ -0.92
CCDC93-208ENST00000474546 CCAR1Q8IX12 1150 aaKnown RBP9.32□□□□□ -0.92
CCDC93-208ENST00000474546 RASEFQ8IZ41 740 aa9.32□□□□□ -0.92
CCDC93-208ENST00000474546 FBXL16Q8N461 479 aa9.32□□□□□ -0.92
CCDC93-208ENST00000474546 MARCH10Q8NA82 808 aaPredicted RBP9.32□□□□□ -0.92
CCDC93-208ENST00000474546 MNS1Q8NEH6 495 aa9.32□□□□□ -0.92
CCDC93-208ENST00000474546 UBXN4Q92575 508 aa9.32□□□□□ -0.92
CCDC93-208ENST00000474546 PSD3Q9NYI0 1048 aa9.32□□□□□ -0.92
CCDC93-208ENST00000474546 DNAI1Q9UI46 699 aa9.32□□□□□ -0.92
CCDC93-208ENST00000474546 COL15A1P39059 1388 aa9.32□□□□□ -0.92
CCDC93-208ENST00000474546 CEMIPQ8WUJ3 1361 aa9.32□□□□□ -0.92
CCDC93-208ENST00000474546 MED23Q9ULK4 1368 aa9.32□□□□□ -0.92
CCDC93-208ENST00000474546 PIK3C2AO00443 1686 aa9.32□□□□□ -0.92
CCDC93-208ENST00000474546 NHSQ6T4R5 1651 aa9.32□□□□□ -0.92
CCDC93-208ENST00000474546 KDM3BQ7LBC6 1761 aa9.32□□□□□ -0.92
CCDC93-208ENST00000474546 UTYO14607 1347 aa9.31□□□□□ -0.92
CCDC93-208ENST00000474546 ACEP12821 1306 aa9.31□□□□□ -0.92
CCDC93-208ENST00000474546 MYH15Q9Y2K3 1946 aa9.31□□□□□ -0.92
CCDC93-208ENST00000474546 SLC27A2O14975 620 aa9.31□□□□□ -0.92
CCDC93-208ENST00000474546 YEATS4O95619 227 aa9.31□□□□□ -0.92
CCDC93-208ENST00000474546 IVLP07476 585 aa9.31□□□□□ -0.92
CCDC93-208ENST00000474546 CYP2C19P33261 490 aa9.31□□□□□ -0.92
CCDC93-208ENST00000474546 DGKZQ13574 1117 aa9.31□□□□□ -0.92
CCDC93-208ENST00000474546 AMOTQ4VCS5 1084 aa9.31□□□□□ -0.92
CCDC93-208ENST00000474546 CT47A1Q5JQC4 288 aaPredicted RBP9.31□□□□□ -0.92
CCDC93-208ENST00000474546 BEND3Q5T5X7 828 aa9.31□□□□□ -0.92
CCDC93-208ENST00000474546 BRAPQ7Z569 592 aa9.31□□□□□ -0.92
CCDC93-208ENST00000474546 NUTM1Q86Y26 1132 aa9.31□□□□□ -0.92
CCDC93-208ENST00000474546 ELOA2Q8IYF1 753 aaPredicted RBP9.31□□□□□ -0.92
CCDC93-208ENST00000474546 CACTINQ8WUQ7 758 aaKnown RBP9.31□□□□□ -0.92
CCDC93-208ENST00000474546 EFCC1Q9HA90 598 aa9.31□□□□□ -0.92
CCDC93-208ENST00000474546 IL1RAPL2Q9NP60 686 aa9.31□□□□□ -0.92
CCDC93-208ENST00000474546 LRRC4BQ9NT99 713 aa9.31□□□□□ -0.92
CCDC93-208ENST00000474546 ZNF219Q9P2Y4 722 aaPredicted RBP9.31□□□□□ -0.92
CCDC93-208ENST00000474546 EIF3JO75822 258 aaKnown RBP9.3□□□□□ -0.92
CCDC93-208ENST00000474546 LIG1P18858 919 aa9.3□□□□□ -0.92
CCDC93-208ENST00000474546 RESTQ13127 1097 aa9.3□□□□□ -0.92
CCDC93-208ENST00000474546 FOXD4L6Q3SYB3 417 aaPredicted RBP9.3□□□□□ -0.92
CCDC93-208ENST00000474546 NUTM2GQ5VZR2 741 aa9.3□□□□□ -0.92
CCDC93-208ENST00000474546 FOXD4L3Q6VB84 417 aaPredicted RBP9.3□□□□□ -0.92
CCDC93-208ENST00000474546 CDC37L1Q7L3B6 337 aa9.3□□□□□ -0.92
CCDC93-208ENST00000474546 GPR161Q8N6U8 529 aaKnown RBP9.3□□□□□ -0.92
CCDC93-208ENST00000474546 LINS1Q8NG48 757 aa9.3□□□□□ -0.92
CCDC93-208ENST00000474546 SMARCC2Q8TAQ2 1214 aa9.3□□□□□ -0.92
CCDC93-208ENST00000474546 ANKRD24Q8TF21 1146 aa9.3□□□□□ -0.92
CCDC93-208ENST00000474546 MRPS27Q92552 414 aaKnown RBP9.3□□□□□ -0.92
CCDC93-208ENST00000474546 ZNF592Q92610 1267 aa9.3□□□□□ -0.92
CCDC93-208ENST00000474546 NEK1Q96PY6 1258 aa9.3□□□□□ -0.92
CCDC93-208ENST00000474546 ARID3AQ99856 593 aa9.3□□□□□ -0.92
CCDC93-208ENST00000474546 FSD1Q9BTV5 496 aa9.3□□□□□ -0.92
CCDC93-208ENST00000474546 FAM107BQ9H098 131 aa9.3□□□□□ -0.92
CCDC93-208ENST00000474546 GBP3Q9H0R5 595 aa9.3□□□□□ -0.92
CCDC93-208ENST00000474546 DNAJC25Q9H1X3 360 aa9.3□□□□□ -0.92
CCDC93-208ENST00000474546 C9orf78Q9NZ63 289 aaPredicted RBP9.3□□□□□ -0.92
CCDC93-208ENST00000474546 DACH1Q9UI36 760 aa9.3□□□□□ -0.92
CCDC93-208ENST00000474546 TPCN1Q9ULQ1 816 aa9.3□□□□□ -0.92
CCDC93-208ENST00000474546 SPEF2Q9C093 1822 aa9.3□□□□□ -0.92
CCDC93-208ENST00000474546 MAP3K15Q6ZN16 1313 aa9.3□□□□□ -0.92
CCDC93-208ENST00000474546 ZC3H4Q9UPT8 1303 aaKnown RBP9.3□□□□□ -0.92
CCDC93-208ENST00000474546 LMO7Q8WWI1 1683 aa9.29□□□□□ -0.92
CCDC93-208ENST00000474546 CACNA1AO00555 2505 aa9.29□□□□□ -0.92
CCDC93-208ENST00000474546 TULP2O00295 520 aa9.29□□□□□ -0.92
CCDC93-208ENST00000474546 PFKFB2O60825 505 aa9.29□□□□□ -0.92
CCDC93-208ENST00000474546 ERLIN1O75477 346 aa9.29□□□□□ -0.92
CCDC93-208ENST00000474546 MCM3P25205 808 aa9.29□□□□□ -0.92
CCDC93-208ENST00000474546 ETF1P62495 437 aaKnown RBP9.29□□□□□ -0.92
CCDC93-208ENST00000474546 KMT5BQ4FZB7 885 aa9.29□□□□□ -0.92
CCDC93-208ENST00000474546 HSP90AB2PQ58FF8 381 aa9.29□□□□□ -0.92
CCDC93-208ENST00000474546 ADALQ6DHV7 355 aa9.29□□□□□ -0.92
CCDC93-208ENST00000474546 CKAP2LQ8IYA6 745 aa9.29□□□□□ -0.92
CCDC93-208ENST00000474546 C17orf53Q8N3J3 647 aaPredicted RBP9.29□□□□□ -0.92
CCDC93-208ENST00000474546 ERCC4Q92889 916 aaPredicted RBP9.29□□□□□ -0.92
CCDC93-208ENST00000474546 ZNF274Q96GC6 653 aaPredicted RBP9.29□□□□□ -0.92
CCDC93-208ENST00000474546 CDCA7Q9BWT1 371 aaPredicted RBP9.29□□□□□ -0.92
CCDC93-208ENST00000474546 ZNF215Q9UL58 517 aaPredicted RBP9.29□□□□□ -0.92
CCDC93-208ENST00000474546 IQSEC3Q9UPP2 1182 aaPredicted RBP9.29□□□□□ -0.92
CCDC93-208ENST00000474546 SPG7Q9UQ90 795 aa9.29□□□□□ -0.92
CCDC93-208ENST00000474546 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.29□□□□□ -0.923e-6■■■□□ 16.3
CCDC93-208ENST00000474546 CASP8AP2Q9UKL3 1982 aa9.29□□□□□ -0.92
CCDC93-208ENST00000474546 WDR19Q8NEZ3 1342 aa9.29□□□□□ -0.92
CCDC93-208ENST00000474546 AP5Z1O43299 807 aa9.28□□□□□ -0.92
CCDC93-208ENST00000474546 NR1I2O75469 434 aa9.28□□□□□ -0.92
CCDC93-208ENST00000474546 CCZ1BP86790 482 aa9.28□□□□□ -0.92
CCDC93-208ENST00000474546 CCZ1P86791 482 aaPredicted RBP9.28□□□□□ -0.92
CCDC93-208ENST00000474546 NEXNQ0ZGT2 675 aa9.28□□□□□ -0.92
CCDC93-208ENST00000474546 BRD3Q15059 726 aa9.28□□□□□ -0.92
CCDC93-208ENST00000474546 CAMK4Q16566 473 aa9.28□□□□□ -0.92
CCDC93-208ENST00000474546 CCDC93Q567U6 631 aa9.28□□□□□ -0.92
CCDC93-208ENST00000474546 TSHZ3Q63HK5 1081 aa9.28□□□□□ -0.92
CCDC93-208ENST00000474546 KSR2Q6VAB6 950 aa9.28□□□□□ -0.92
CCDC93-208ENST00000474546 AACSQ86V21 672 aa9.28□□□□□ -0.92
CCDC93-208ENST00000474546 EXOC4Q96A65 974 aa9.28□□□□□ -0.92
CCDC93-208ENST00000474546 SDF4Q9BRK5 362 aa9.28□□□□□ -0.92
CCDC93-208ENST00000474546 POLR3EQ9NVU0 708 aa9.28□□□□□ -0.92
CCDC93-208ENST00000474546 RTEL1Q9NZ71 1219 aa9.28□□□□□ -0.92
CCDC93-208ENST00000474546 SH3TC1Q8TE82 1336 aa9.28□□□□□ -0.92
CCDC93-208ENST00000474546 MEGF6O75095 1541 aa9.27□□□□□ -0.93
CCDC93-208ENST00000474546 BTAF1O14981 1849 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms